BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024967
         (315 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_189105.1| RHO guanyl-nucleotide exchange factor 8 [Arabid...    74   1e-11
ref|XP_002885662.1| hypothetical protein ARALYDRAFT_319167 [Arab...    74   1e-11
pdb|2NTY|A Chain A, Rop4-Gdp-Prone8 gi|126031215|pdb|2NTY|B Chai...    74   1e-11
gb|ABE65963.1| unknown [Arabidopsis thaliana]                          74   1e-11
ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine ...    74   2e-11

>ref|NP_189105.1| RHO guanyl-nucleotide exchange factor 8 [Arabidopsis thaliana]
           gi|75274332|sp|Q9LV40.1|ROGF8_ARATH RecName: Full=Rho
           guanine nucleotide exchange factor 8; Short=AtRopGEF8
           gi|9294058|dbj|BAB02015.1| unnamed protein product
           [Arabidopsis thaliana] gi|332643409|gb|AEE76930.1| RHO
           guanyl-nucleotide exchange factor 8 [Arabidopsis
           thaliana]
          Length = 523

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = -1

Query: 291 DMEMMKERFAKLLLGEDMSGGGKGVSSALALSNAITNL 178
           DMEMMK+RFAKLLLGEDMSGGGKGVSSALALSNAITNL
Sbjct: 85  DMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNL 122


>ref|XP_002885662.1| hypothetical protein ARALYDRAFT_319167 [Arabidopsis lyrata subsp.
           lyrata] gi|297331502|gb|EFH61921.1| hypothetical protein
           ARALYDRAFT_319167 [Arabidopsis lyrata subsp. lyrata]
          Length = 524

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = -1

Query: 291 DMEMMKERFAKLLLGEDMSGGGKGVSSALALSNAITNL 178
           DMEMMK+RFAKLLLGEDMSGGGKGVSSALALSNAITNL
Sbjct: 85  DMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNL 122


>pdb|2NTY|A Chain A, Rop4-Gdp-Prone8 gi|126031215|pdb|2NTY|B Chain B,
           Rop4-Gdp-Prone8 gi|226887362|pdb|2WBL|A Chain A,
           Three-Dimensional Structure Of A Binary Rop-Prone
           Complex gi|226887363|pdb|2WBL|B Chain B,
           Three-Dimensional Structure Of A Binary Rop-Prone
           Complex
          Length = 365

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = -1

Query: 291 DMEMMKERFAKLLLGEDMSGGGKGVSSALALSNAITNL 178
           DMEMMK+RFAKLLLGEDMSGGGKGVSSALALSNAITNL
Sbjct: 10  DMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNL 47


>gb|ABE65963.1| unknown [Arabidopsis thaliana]
          Length = 524

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 37/38 (97%), Positives = 38/38 (100%)
 Frame = -1

Query: 291 DMEMMKERFAKLLLGEDMSGGGKGVSSALALSNAITNL 178
           DMEMMK+RFAKLLLGEDMSGGGKGVSSALALSNAITNL
Sbjct: 85  DMEMMKDRFAKLLLGEDMSGGGKGVSSALALSNAITNL 122


>ref|XP_004166838.1| PREDICTED: LOW QUALITY PROTEIN: rho guanine nucleotide exchange
           factor 8-like [Cucumis sativus]
          Length = 553

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = -1

Query: 294 LDMEMMKERFAKLLLGEDMSGGGKGVSSALALSNAITNL 178
           L+ME MKERFAKLLLGEDMSGGGKGVSSALALSNAITNL
Sbjct: 106 LEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAITNL 144