BLASTX nr result

ID: Coptis25_contig00024954 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024954
         (1880 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242...   767   0.0  
ref|XP_002523580.1| conserved hypothetical protein [Ricinus comm...   733   0.0  
ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|2...   701   0.0  
ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|2...   696   0.0  
ref|NP_030964.1| uncharacterized protein [Arabidopsis thaliana] ...   688   0.0  

>ref|XP_002269745.1| PREDICTED: uncharacterized protein LOC100242579 [Vitis vinifera]
          Length = 559

 Score =  767 bits (1980), Expect = 0.0
 Identities = 365/564 (64%), Positives = 440/564 (78%), Gaps = 8/564 (1%)
 Frame = -1

Query: 1733 MGNCLPTAPSNSL------LPIETVFKLPSQVPPWPQXXXXXXXXXXXXG-LEVRQISTF 1575
            MGNCL  + ++ +      L IET FKLP+ +P WP             G LEV QIS+F
Sbjct: 1    MGNCLTVSSASDVSKKRKSLAIETSFKLPAPMPTWPPGEGFAGGTIDLGGGLEVCQISSF 60

Query: 1574 KKVWATLEGGPDNLGATFFEPWPIPDGFFMLGCYAQPNNKSLFGWVLVGKDVQNDPSQGT 1395
             KVWAT EGGPDNLGATFFEP P+P+ F MLGCY+QPN K LFGWVL GKD  N+P  G 
Sbjct: 61   TKVWATHEGGPDNLGATFFEPSPMPEEFCMLGCYSQPNKKPLFGWVLAGKDNTNNPLGGA 120

Query: 1394 LKMPVDYRLVWSSESMKMKKEGNGYIWLPIPPDGYTAGGLILTNSPTKPPLEKVRCVHSD 1215
            LK P+DY LVWSSES+K+K++GNGY+WLP PPDGY A G ++TN P KP L+K+RCV SD
Sbjct: 121  LKKPIDYTLVWSSESLKIKQDGNGYVWLPTPPDGYKAVGHVITNLPEKPSLDKIRCVRSD 180

Query: 1214 LTDLCEQDTWIWGTDRERPESNTSEVSVYGLRPTIRGARALGVSIGTFTVQLAGVDTALS 1035
            LTDLCE DTWIWG D+    +N +  +VY L+P+ RGA+AL VS+GTF  Q  G  ++LS
Sbjct: 181  LTDLCEADTWIWGLDKV---ANANGFNVYDLQPSDRGAQALAVSVGTFVAQNGGAASSLS 237

Query: 1034 LSCLKSADSNFSCMPNLTQIKALVQAYSPSIYLHPDETYMASSVNWFFNNGALLYKKGDE 855
            L+CLK+  SN   MPNL Q+ ALVQAYSP +YLHPDE Y+ SSV+WFF NGALLY++G+E
Sbjct: 238  LACLKNISSNLYAMPNLAQVDALVQAYSPWVYLHPDEQYLPSSVSWFFQNGALLYQQGEE 297

Query: 854  SNPVSIDPNGSNLPQGGSNDGEYWLDLPVDEGARDEVMKGDLQSSTAYLHIKPMLGATFT 675
            S PV+IDP GSNLPQGGSNDG YWLDLPVD  A++ V KGDLQ S  Y+HIKPMLGATFT
Sbjct: 298  SKPVNIDPTGSNLPQGGSNDGAYWLDLPVDAKAKETVKKGDLQDSMTYMHIKPMLGATFT 357

Query: 674  DVSTWIFYPFNGPGRAKLRLINIPLGKIGEHVGDWEHVTLRISNFTGELWRVYFSEHSGG 495
            D++ WIFYPFNGP RAK+ LINI LGKIGEHVGDWEHVTLR+SNF G+L  V+FSEHS G
Sbjct: 358  DIAIWIFYPFNGPARAKVELINISLGKIGEHVGDWEHVTLRVSNFNGKLMNVFFSEHSSG 417

Query: 494  TWVNASEVEYHSANNIVAYASLHGHAFYSKPGLVLQGNSNLDIGIRNDTAKSNIVIDTSM 315
            TWVNASE+E+ + N +V+YASLHGHAFY KPGLVLQG+  +  GIRNDTAKS +V+DT  
Sbjct: 418  TWVNASELEFQNGNKVVSYASLHGHAFYPKPGLVLQGSGAM--GIRNDTAKSKMVMDTGT 475

Query: 314  RYEVISAEYL-SEVIEPPWLNYYRKWGPEISYAIGNELSLVENLLPGELKSVFTTIIGAI 138
            RY V++AEYL S V+EPPWLNYYRKWGP+ISY +  E+  VE LLPG+LKS F  ++ ++
Sbjct: 476  RYIVVAAEYLGSAVVEPPWLNYYRKWGPKISYDLAAEIKEVEKLLPGKLKSAFEKLVKSL 535

Query: 137  PDEVLGEEGPTGPKVKNNWNGDDV 66
            P+E+LGEEGPTGPK+K NW+GD+V
Sbjct: 536  PNEILGEEGPTGPKMKKNWDGDEV 559


>ref|XP_002523580.1| conserved hypothetical protein [Ricinus communis]
            gi|223537142|gb|EEF38775.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 551

 Score =  733 bits (1891), Expect = 0.0
 Identities = 338/559 (60%), Positives = 422/559 (75%), Gaps = 4/559 (0%)
 Frame = -1

Query: 1733 MGNCLP---TAPSNSLLPIETVFKLPSQVPPWPQXXXXXXXXXXXXGLEVRQISTFKKVW 1563
            MGNCL     +     LPIET FKLPS +P WP             GL+V QIS+  KVW
Sbjct: 1    MGNCLSIKDVSKKRKTLPIETSFKLPSSLPKWPPGEGFGNGTIDLGGLQVCQISSLNKVW 60

Query: 1562 ATLEGGPDNLGATFFEPWPIPDGFFMLGCYAQPNNKSLFGWVLVGKDVQNDPSQGTLKMP 1383
            +T EGGPDN+GA+FFEP  IP GFFMLGCY Q N++ L+GWVL GKD     + G L+ P
Sbjct: 61   STQEGGPDNVGASFFEPSQIPQGFFMLGCYCQSNSRPLYGWVLAGKD----DAGGALEKP 116

Query: 1382 VDYRLVWSSESMKMKKEGNGYIWLPIPPDGYTAGGLILTNSPTKPPLEKVRCVHSDLTDL 1203
            +DY LVWSSES+K+K++  GYIWLP  PDGY A GL++T+SP KP L+K+RCV SDLTD 
Sbjct: 117  IDYTLVWSSESLKIKQDSIGYIWLPTAPDGYRAVGLVVTSSPEKPSLDKMRCVRSDLTDQ 176

Query: 1202 CEQDTWIWGTDRERPESNTSEVSVYGLRPTIRGARALGVSIGTFTVQLAGVDTALSLSCL 1023
            CE+D W+WG +++   S+ +  +V+ LRP+ RG +A+GV +GTF  Q    +   SL CL
Sbjct: 177  CEKDIWVWGPEKQ---SDPNGFNVFSLRPSNRGTQAMGVCVGTFVAQNGNDNNPASLVCL 233

Query: 1022 KSADSNFSCMPNLTQIKALVQAYSPSIYLHPDETYMASSVNWFFNNGALLYKKGDESNPV 843
            K+  +N SCMPN  QI+A+ QAYSP IY HPDE Y+ SSV+W+FNNGALLYK+G+ESNPV
Sbjct: 234  KNVSNNLSCMPNENQIQAIFQAYSPWIYFHPDEEYLPSSVSWYFNNGALLYKQGEESNPV 293

Query: 842  SIDPNGSNLPQGGSNDGEYWLDLPVDEGARDEVMKGDLQSSTAYLHIKPMLGATFTDVST 663
             ++ NGSNLPQGG+NDG YWLDLPVDE A+D V KGDLQ +  YLHIKPM GATFTD+  
Sbjct: 294  KVETNGSNLPQGGANDGVYWLDLPVDEKAKDRVKKGDLQETEVYLHIKPMFGATFTDIVI 353

Query: 662  WIFYPFNGPGRAKLRLINIPLGKIGEHVGDWEHVTLRISNFTGELWRVYFSEHSGGTWVN 483
            W+F PFNGP +AK+  +N+PLGKIGEHVGDWEHVTLR+SNF  ELW VYFSEHSGG+W+N
Sbjct: 354  WVFCPFNGPAKAKIEFLNVPLGKIGEHVGDWEHVTLRVSNFNSELWSVYFSEHSGGSWIN 413

Query: 482  ASEVEYHSANNIVAYASLHGHAFYSKPGLVLQGNSNLDIGIRNDTAKSNIVIDTSMRYEV 303
            AS++E+ S N  V Y+SLHGHA YSKPGLVLQGN+   IGIRNDTAKS  ++DT  ++ V
Sbjct: 414  ASQLEFQSGNKFVGYSSLHGHAMYSKPGLVLQGNNG--IGIRNDTAKSGKILDTGAKFSV 471

Query: 302  ISAEYLS-EVIEPPWLNYYRKWGPEISYAIGNELSLVENLLPGELKSVFTTIIGAIPDEV 126
            ++AEYL   +IEPPW+N++RKWGP+ISY I +E+  +E +LPG+LKS F  ++  +P EV
Sbjct: 472  VAAEYLGMTIIEPPWINFFRKWGPKISYNIADEIKKIEKILPGKLKSAFEKVVNGLPSEV 531

Query: 125  LGEEGPTGPKVKNNWNGDD 69
            LGEEGPTGPKVK NW GD+
Sbjct: 532  LGEEGPTGPKVKGNWTGDE 550


>ref|XP_002330905.1| predicted protein [Populus trichocarpa] gi|222872727|gb|EEF09858.1|
            predicted protein [Populus trichocarpa]
          Length = 587

 Score =  701 bits (1809), Expect = 0.0
 Identities = 343/597 (57%), Positives = 418/597 (70%), Gaps = 41/597 (6%)
 Frame = -1

Query: 1733 MGNCLPTAPS----------NSLLPIETVFKLPSQVPPWPQXXXXXXXXXXXXG------ 1602
            MG+CL +  S            +LPI+  FKLP+ +P WP                    
Sbjct: 1    MGSCLSSRQSAISCEGVSKKQKVLPIDASFKLPAPLPSWPPGRFLFLFPFWSFLPSLMLS 60

Query: 1601 ------------------------LEVRQISTFKKVWATLEGGPDNLGATFFEPWPIPDG 1494
                                    L+V QIS+F KVWAT EGGPD+LGA+FFEP  +P G
Sbjct: 61   HCLYRPANLVCGGFGSGIIDLGDGLQVCQISSFNKVWATHEGGPDDLGASFFEPSQLPQG 120

Query: 1493 FFMLGCYAQPNNKSLFGWVLVGKDVQNDPSQGTLKMPVDYRLVWSSESMKMKKEGNGYIW 1314
            F MLGCY+QPNN+SL+GWVL G+D     +   LK P+DY LVWSSES+++K++G GYIW
Sbjct: 121  FSMLGCYSQPNNRSLYGWVLAGRD----ETGSALKQPIDYTLVWSSESLQIKQDGVGYIW 176

Query: 1313 LPIPPDGYTAGGLILTNSPTKPPLEKVRCVHSDLTDLCEQDTWIWGTDRERPESNTSEVS 1134
            LP PPDGY A G ++T SP KPPL K+RCV SDLT+ CE D+W+WG  +E   S+ +  +
Sbjct: 177  LPTPPDGYKALGHVVTKSPQKPPLGKIRCVRSDLTEQCEFDSWVWGLGKE---SDLNGFN 233

Query: 1133 VYGLRPTIRGARALGVSIGTFTVQLAGVDTALSLSCLKSADSNFSCMPNLTQIKALVQAY 954
            V+ L P+ RG +A+GV +GTF  Q       +SLSCLK+  SN SCMPNL QIKA+ QAY
Sbjct: 234  VFSLFPSNRGTQAMGVCVGTFVAQKT-TTAPVSLSCLKNVVSNLSCMPNLDQIKAIFQAY 292

Query: 953  SPSIYLHPDETYMASSVNWFFNNGALLYKKGDESNPVSIDPNGSNLPQGGSNDGEYWLDL 774
            SP IY HPDE Y+ SSV W+F NGALLY++G+ES PV I+ NGSNLPQGGSNDG YWLDL
Sbjct: 293  SPWIYFHPDEEYLPSSVEWYFVNGALLYERGEESKPVPIESNGSNLPQGGSNDGAYWLDL 352

Query: 773  PVDEGARDEVMKGDLQSSTAYLHIKPMLGATFTDVSTWIFYPFNGPGRAKLRLINIPLGK 594
            PV+EGA+D V KGDLQ S  YLHIKPM GA FTD+  W+FYPFNGP +AK+  INIPLGK
Sbjct: 353  PVEEGAKDRVKKGDLQDSRVYLHIKPMFGAAFTDIVVWVFYPFNGPSKAKVEFINIPLGK 412

Query: 593  IGEHVGDWEHVTLRISNFTGELWRVYFSEHSGGTWVNASEVEYHSANNIVAYASLHGHAF 414
            IGEHVGDWEH+TLRISNF GEL  +YFSEHSGGTWVN+SE+E+ + N  V Y+SLHGHA 
Sbjct: 413  IGEHVGDWEHLTLRISNFNGELLSIYFSEHSGGTWVNSSELEFQNGNKAVTYSSLHGHAM 472

Query: 413  YSKPGLVLQGNSNLDIGIRNDTAKSNIVIDTSMRYEVISAEYLSEVI-EPPWLNYYRKWG 237
            Y+KPGLVLQG+ +  IGIRNDTAKS   IDT     V++AEYL   I EPPWLNY+RKWG
Sbjct: 473  YAKPGLVLQGSGS--IGIRNDTAKSKKFIDTGTNSLVVAAEYLGMAITEPPWLNYFRKWG 530

Query: 236  PEISYAIGNELSLVENLLPGELKSVFTTIIGAIPDEVLGEEGPTGPKVKNNWNGDDV 66
            P+++Y I  E+  VE LLPG+LKS F   + ++P EVLGEEGPTGPK+K NW GD+V
Sbjct: 531  PKLTYDIAEEIKKVEKLLPGKLKSAFDKFVRSLPSEVLGEEGPTGPKLKRNWTGDEV 587


>ref|XP_002325025.1| predicted protein [Populus trichocarpa] gi|222866459|gb|EEF03590.1|
            predicted protein [Populus trichocarpa]
          Length = 546

 Score =  696 bits (1795), Expect = 0.0
 Identities = 337/558 (60%), Positives = 406/558 (72%), Gaps = 2/558 (0%)
 Frame = -1

Query: 1733 MGNCLPTAPSNSLLPIETVFKLPSQVPPWPQXXXXXXXXXXXXG-LEVRQISTFKKVWAT 1557
            MGN   T+ +   LPI T FKLPS +P  PQ              L+V Q+ +  K+WAT
Sbjct: 1    MGN--GTSATKEALPIATPFKLPSPLPSLPQGEGFGNGIINLGSGLQVCQVVSLNKIWAT 58

Query: 1556 LEGGPDNLGATFFEPWPIPDGFFMLGCYAQPNNKSLFGWVLVGKDVQNDPSQGTLKMPVD 1377
             EGGPDNLGATFFEP  +P GF MLGCY+QPNN+ L GWVL GKD   +     L  PVD
Sbjct: 59   NEGGPDNLGATFFEPSQMPQGFSMLGCYSQPNNRMLHGWVLAGKDETGE----ALTKPVD 114

Query: 1376 YRLVWSSESMKMKKEGNGYIWLPIPPDGYTAGGLILTNSPTKPPLEKVRCVHSDLTDLCE 1197
            Y LVWSSES+++K+EG GYIWLP P DGY A G ++T SP KP LEKVRCV SDLTD C+
Sbjct: 115  YTLVWSSESLQIKQEGVGYIWLPTPLDGYKALGCVVTTSPEKPSLEKVRCVRSDLTDDCQ 174

Query: 1196 QDTWIWGTDRERPESNTSEVSVYGLRPTIRGARALGVSIGTFTVQLAGVDTALSLSCLKS 1017
             D WIWG  +E   S+ +  +V+ LRP+ RG +A+GVS+GTF  Q      ++SL+CLK+
Sbjct: 175  IDKWIWGQGKE---SDPNGFNVFSLRPSNRGTQAMGVSVGTFVAQNT-TSASISLACLKN 230

Query: 1016 ADSNFSCMPNLTQIKALVQAYSPSIYLHPDETYMASSVNWFFNNGALLYKKGDESNPVSI 837
             +SN SCMP L Q++A+ QAYSP IY HPDE Y+ SS  W+F NGALLYKK +ES PV I
Sbjct: 231  IESNLSCMPTLDQVQAIFQAYSPRIYFHPDEEYLPSSARWYFTNGALLYKKDEESKPVPI 290

Query: 836  DPNGSNLPQGGSNDGEYWLDLPVDEGARDEVMKGDLQSSTAYLHIKPMLGATFTDVSTWI 657
            +  GSNLPQGGSNDG YWLDLPV+E AR+ V +GDLQ    YLHIKPMLGATFTD+  W+
Sbjct: 291  ESTGSNLPQGGSNDGSYWLDLPVEEAARERVKRGDLQDCQVYLHIKPMLGATFTDIVAWL 350

Query: 656  FYPFNGPGRAKLRLINIPLGKIGEHVGDWEHVTLRISNFTGELWRVYFSEHSGGTWVNAS 477
            FYPFNGPGRAK+ LI +PLGK G+HVGDWEHVTLRISNF G+L  +Y S HSGGTW +AS
Sbjct: 351  FYPFNGPGRAKVDLITVPLGKTGQHVGDWEHVTLRISNFNGQLCGIYLSAHSGGTWYDAS 410

Query: 476  EVEYHSANNIVAYASLHGHAFYSKPGLVLQGNSNLDIGIRNDTAKSNIVIDTSMRYEVIS 297
            E+E+   N  V Y+SL+GHA Y+KPGLVLQG+ N  IGIRNDTAKSN  IDT  R+ V+S
Sbjct: 411  ELEFQDGNKAVIYSSLNGHAMYAKPGLVLQGSGN--IGIRNDTAKSNKFIDTGARFSVVS 468

Query: 296  AEYL-SEVIEPPWLNYYRKWGPEISYAIGNELSLVENLLPGELKSVFTTIIGAIPDEVLG 120
            AEY+ S V+EPPWLNY RKWGP I+Y +  E   VE LLPG+LKS F   + ++P E+ G
Sbjct: 469  AEYMGSSVVEPPWLNYLRKWGPNITYDLAEEAETVEKLLPGKLKSAFDKFVKSLPKEIFG 528

Query: 119  EEGPTGPKVKNNWNGDDV 66
            EEGPTGPK+K NW GD+V
Sbjct: 529  EEGPTGPKLKRNWTGDEV 546


>ref|NP_030964.1| uncharacterized protein [Arabidopsis thaliana]
            gi|15293039|gb|AAK93630.1| unknown protein [Arabidopsis
            thaliana] gi|20197184|gb|AAC16076.2| expressed protein
            [Arabidopsis thaliana] gi|22136978|gb|AAM91718.1| unknown
            protein [Arabidopsis thaliana]
            gi|330255303|gb|AEC10397.1| uncharacterized protein
            [Arabidopsis thaliana]
          Length = 553

 Score =  688 bits (1775), Expect = 0.0
 Identities = 332/568 (58%), Positives = 413/568 (72%), Gaps = 13/568 (2%)
 Frame = -1

Query: 1733 MGNCLPTA-PSNS--------LLPIETVFKLPSQVPPWPQXXXXXXXXXXXXG-LEVRQI 1584
            MGNCL T+ PS+          LP++  FK PS +P + +            G LEV Q+
Sbjct: 1    MGNCLSTSDPSHEDVSKKLPKALPVDAAFKFPSPLPTFTRGDGFAKGTIDLGGGLEVSQV 60

Query: 1583 STFKKVWATLEGGPDNLGATFFEPWPIPDGFFMLGCYAQPNNKSLFGWVLVGKDVQNDPS 1404
            STF KVW+T EGGPDNLGATFFEP  IP GF +LG YAQPNN++LFGWVL  +D+    S
Sbjct: 61   STFNKVWSTYEGGPDNLGATFFEPSSIPSGFSILGYYAQPNNRNLFGWVLTARDL----S 116

Query: 1403 QGTLKMPVDYRLVWSSESMKMKKEGNGYIWLPIPPDGYTAGGLILTNSPTKPPLEKVRCV 1224
              TLK PVDY LV ++ES+K+K++G GY W P+PPDGY A GLI+TN   KPPL+K+RC+
Sbjct: 117  SNTLKPPVDYTLVGNTESLKIKQDGTGYFWQPVPPDGYQAVGLIVTNYSQKPPLDKLRCI 176

Query: 1223 HSDLTDLCEQDTWIWGTDRERPESNTSEVSVYGLRPTIRGARALGVSIGTFTVQLAGVDT 1044
             SDLT+ CE DTWIWGT+          V++  L+PT RG +A GV +GTFT Q     +
Sbjct: 177  RSDLTEQCEADTWIWGTNG---------VNISNLKPTTRGTQATGVYVGTFTWQTQN-SS 226

Query: 1043 ALSLSCLKSADSNFSCMPNLTQIKALVQAYSPSIYLHPDETYMASSVNWFFNNGALLYKK 864
              SLSCLK+   +FS MPN +QI+ L Q +SP IY HPDE Y+ SSV W+FNNGALLYKK
Sbjct: 227  PPSLSCLKNTKLDFSTMPNGSQIEELFQTFSPCIYFHPDEEYLPSSVTWYFNNGALLYKK 286

Query: 863  GDESNPVSIDPNGSNLPQGGSNDGEYWLDLPVDEGARDEVMKGDLQSSTAYLHIKPMLGA 684
            G+ES P+ I+ NGSNLPQGGSNDG YWLDLP+D+  ++ V KGDLQS+  YLHIKPMLGA
Sbjct: 287  GEESKPIPIESNGSNLPQGGSNDGSYWLDLPIDKNGKERVKKGDLQSTKVYLHIKPMLGA 346

Query: 683  TFTDVSTWIFYPFNGPGRAKLRLINIPLGKIGEHVGDWEHVTLRISNFTGELWRVYFSEH 504
            TFTD+S WIFYPFNGP +AK++ +N+PLG+IGEH+GDWEH TLRISNFTGELWRV+ S+H
Sbjct: 347  TFTDISIWIFYPFNGPAKAKVKFVNLPLGRIGEHIGDWEHTTLRISNFTGELWRVFLSQH 406

Query: 503  SGGTWVNASEVEYHSA--NNIVAYASLHGHAFYSKPGLVLQGNSNLDIGIRNDTAKSNIV 330
            SGG W++A ++E+     N  VAYASLHGHA Y KPGLVLQG+    +GIRNDT K   V
Sbjct: 407  SGGIWIDACDLEFQDGGNNKFVAYASLHGHAMYPKPGLVLQGDDG--VGIRNDTGKGKKV 464

Query: 329  IDTSMRYEVISAEY-LSEVIEPPWLNYYRKWGPEISYAIGNELSLVENLLPGELKSVFTT 153
            +DT + YEVI+AEY    V+EPPW+ Y+RKWGP+I Y + +E+  VE +LPG LK  F  
Sbjct: 465  LDTGLGYEVIAAEYDGGGVVEPPWVKYFRKWGPKIDYNVDDEVKSVERILPGLLKKAFVK 524

Query: 152  IIGAIPDEVLGEEGPTGPKVKNNWNGDD 69
             +  IPDEV GE+GPTGPK+K+NW GD+
Sbjct: 525  FVKKIPDEVYGEDGPTGPKLKSNWAGDE 552


Top