BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024952
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]                          172   2e-41
emb|CBI29860.3| unnamed protein product [Vitis vinifera]              171   6e-41
ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containi...   171   6e-41
ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-36
ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containi...   155   2e-36

>dbj|BAJ53258.1| JMS10C05.1 [Jatropha curcas]
          Length = 563

 Score =  172 bits (437), Expect = 2e-41
 Identities = 77/104 (74%), Positives = 94/104 (90%)
 Frame = -1

Query: 313 LINMYARCGCIERSKKLFDEMPVKDTKAWSSMIVGLAIHGLAEDALDVFAKMQKDNVRPN 134
           LINMYA+CGCIE+++++FDEM VKD+KAWSSMIVGLAIHGLAEDAL+VF++M++   +PN
Sbjct: 234 LINMYAKCGCIEKAREIFDEMRVKDSKAWSSMIVGLAIHGLAEDALNVFSRMEEAQAKPN 293

Query: 133 QVTFIGVLSACAHRGLVSEGRSYWSIMIEFGIEPLMEHYGCMVD 2
            VTFIG+LSACAH GLVS+G+ YWS M+E GIEP MEHYGCMVD
Sbjct: 294 HVTFIGILSACAHGGLVSDGKRYWSSMLELGIEPSMEHYGCMVD 337



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/81 (38%), Positives = 53/81 (65%)
 Frame = -1

Query: 313 LINMYARCGCIERSKKLFDEMPVKDTKAWSSMIVGLAIHGLAEDALDVFAKMQKDNVRPN 134
           L+N Y++C  I  ++K+FDE+  ++   WS+M+ G A  G+  +AL +F +MQ   + P+
Sbjct: 133 LVNFYSKCEEITIARKVFDEITERNLVCWSAMVSGYARLGMINEALIMFREMQVVGIEPD 192

Query: 133 QVTFIGVLSACAHRGLVSEGR 71
           +V+ +GVLSACA  G +  G+
Sbjct: 193 EVSLVGVLSACAMVGALDIGK 213


>emb|CBI29860.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score =  171 bits (433), Expect = 6e-41
 Identities = 80/104 (76%), Positives = 92/104 (88%)
 Frame = -1

Query: 313 LINMYARCGCIERSKKLFDEMPVKDTKAWSSMIVGLAIHGLAEDALDVFAKMQKDNVRPN 134
           L+NMYA+CGCIER+K++FD MPVKDTKAWSSMIVGLAI+GLAEDAL+ F +M++  V+PN
Sbjct: 303 LVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPN 362

Query: 133 QVTFIGVLSACAHRGLVSEGRSYWSIMIEFGIEPLMEHYGCMVD 2
            VTFIGVLSACAH GLVSEGR YWS M+EFGI P ME YGCMVD
Sbjct: 363 HVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSMELYGCMVD 406



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/81 (44%), Positives = 52/81 (64%)
 Frame = -1

Query: 313 LINMYARCGCIERSKKLFDEMPVKDTKAWSSMIVGLAIHGLAEDALDVFAKMQKDNVRPN 134
           L+N YA+C  I  + K+FDE+  ++  AWS+MI G A  GL  +AL +F  MQK  V P+
Sbjct: 202 LVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPD 261

Query: 133 QVTFIGVLSACAHRGLVSEGR 71
           +VT + V+SACA  G +  G+
Sbjct: 262 EVTMVSVISACAASGALDTGK 282


>ref|XP_002283735.1| PREDICTED: pentatricopeptide repeat-containing protein At4g21065
           [Vitis vinifera]
          Length = 564

 Score =  171 bits (433), Expect = 6e-41
 Identities = 80/104 (76%), Positives = 92/104 (88%)
 Frame = -1

Query: 313 LINMYARCGCIERSKKLFDEMPVKDTKAWSSMIVGLAIHGLAEDALDVFAKMQKDNVRPN 134
           L+NMYA+CGCIER+K++FD MPVKDTKAWSSMIVGLAI+GLAEDAL+ F +M++  V+PN
Sbjct: 234 LVNMYAKCGCIERAKEVFDAMPVKDTKAWSSMIVGLAINGLAEDALEEFFRMEEAKVKPN 293

Query: 133 QVTFIGVLSACAHRGLVSEGRSYWSIMIEFGIEPLMEHYGCMVD 2
            VTFIGVLSACAH GLVSEGR YWS M+EFGI P ME YGCMVD
Sbjct: 294 HVTFIGVLSACAHSGLVSEGRRYWSSMLEFGIVPSMELYGCMVD 337



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 36/81 (44%), Positives = 52/81 (64%)
 Frame = -1

Query: 313 LINMYARCGCIERSKKLFDEMPVKDTKAWSSMIVGLAIHGLAEDALDVFAKMQKDNVRPN 134
           L+N YA+C  I  + K+FDE+  ++  AWS+MI G A  GL  +AL +F  MQK  V P+
Sbjct: 133 LVNFYAKCEDIVLASKVFDEITDRNLVAWSTMISGYARIGLVNEALGLFRDMQKAGVVPD 192

Query: 133 QVTFIGVLSACAHRGLVSEGR 71
           +VT + V+SACA  G +  G+
Sbjct: 193 EVTMVSVISACAASGALDTGK 213


>ref|XP_004167548.1| PREDICTED: pentatricopeptide repeat-containing protein At1g59720,
           mitochondrial-like [Cucumis sativus]
          Length = 376

 Score =  155 bits (393), Expect = 2e-36
 Identities = 69/104 (66%), Positives = 86/104 (82%)
 Frame = -1

Query: 313 LINMYARCGCIERSKKLFDEMPVKDTKAWSSMIVGLAIHGLAEDALDVFAKMQKDNVRPN 134
           L++MYA+CGCIER+K++F  MPVKDT AWSSMI+G A HGLA+DA+D F +M +  V P+
Sbjct: 234 LVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPD 293

Query: 133 QVTFIGVLSACAHRGLVSEGRSYWSIMIEFGIEPLMEHYGCMVD 2
            VTF+ VLSACAH GLVS GR +WS+M+EFGIEP +EHYGC VD
Sbjct: 294 HVTFLAVLSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVD 337



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/80 (40%), Positives = 55/80 (68%)
 Frame = -1

Query: 313 LINMYARCGCIERSKKLFDEMPVKDTKAWSSMIVGLAIHGLAEDALDVFAKMQKDNVRPN 134
           L+N Y +C  I  ++K+F+EMPV++  AW++MI G A  G  ++A+++F +MQK  ++P+
Sbjct: 133 LVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPD 192

Query: 133 QVTFIGVLSACAHRGLVSEG 74
            +T + V+SACA  G +  G
Sbjct: 193 AMTLVSVVSACAVAGALDIG 212


>ref|XP_004136598.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 564

 Score =  155 bits (393), Expect = 2e-36
 Identities = 69/104 (66%), Positives = 86/104 (82%)
 Frame = -1

Query: 313 LINMYARCGCIERSKKLFDEMPVKDTKAWSSMIVGLAIHGLAEDALDVFAKMQKDNVRPN 134
           L++MYA+CGCIER+K++F  MPVKDT AWSSMI+G A HGLA+DA+D F +M +  V P+
Sbjct: 234 LVDMYAKCGCIERAKQVFVHMPVKDTTAWSSMIMGFAYHGLAQDAIDAFQQMLETEVTPD 293

Query: 133 QVTFIGVLSACAHRGLVSEGRSYWSIMIEFGIEPLMEHYGCMVD 2
            VTF+ VLSACAH GLVS GR +WS+M+EFGIEP +EHYGC VD
Sbjct: 294 HVTFLAVLSACAHGGLVSRGRRFWSLMLEFGIEPSVEHYGCKVD 337



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/84 (40%), Positives = 57/84 (67%)
 Frame = -1

Query: 313 LINMYARCGCIERSKKLFDEMPVKDTKAWSSMIVGLAIHGLAEDALDVFAKMQKDNVRPN 134
           L+N Y +C  I  ++K+F+EMPV++  AW++MI G A  G  ++A+++F +MQK  ++P+
Sbjct: 133 LVNFYGKCEEIGFARKVFEEMPVRNLVAWTAMISGHARVGAVDEAMELFREMQKAGIQPD 192

Query: 133 QVTFIGVLSACAHRGLVSEGRSYW 62
            +T + V+SACA  G +  G  YW
Sbjct: 193 AMTLVSVVSACAVAGALDIG--YW 214