BLASTX nr result

ID: Coptis25_contig00024950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024950
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001185107.1| uncharacterized protein [Arabidopsis thalian...    73   3e-11
ref|NP_001117372.1| uncharacterized protein [Arabidopsis thalian...    73   3e-11
ref|NP_564308.1| uncharacterized protein [Arabidopsis thaliana] ...    73   3e-11
ref|XP_002893527.1| hypothetical protein ARALYDRAFT_313543 [Arab...    72   4e-11
ref|XP_002881310.1| hypothetical protein ARALYDRAFT_902473 [Arab...    71   1e-10

>ref|NP_001185107.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332192851|gb|AEE30972.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 91

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/52 (65%), Positives = 45/52 (86%), Gaps = 4/52 (7%)
 Frame = -3

Query: 145 SSQPKP----ARSSFRLPKQTPLTNCIFRAPVEMSCAVESLMPFHTATASAL 2
           S+ PKP    AR++FR+PKQ+PLTN IFR+PVE+SC VE+++P+HTATASAL
Sbjct: 23  SAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETMLPYHTATASAL 74


>ref|NP_001117372.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332192850|gb|AEE30971.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 95

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/52 (65%), Positives = 45/52 (86%), Gaps = 4/52 (7%)
 Frame = -3

Query: 145 SSQPKP----ARSSFRLPKQTPLTNCIFRAPVEMSCAVESLMPFHTATASAL 2
           S+ PKP    AR++FR+PKQ+PLTN IFR+PVE+SC VE+++P+HTATASAL
Sbjct: 23  SAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETMLPYHTATASAL 74


>ref|NP_564308.1| uncharacterized protein [Arabidopsis thaliana]
           gi|30690413|ref|NP_849722.1| uncharacterized protein
           [Arabidopsis thaliana] gi|42571675|ref|NP_973928.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|21553431|gb|AAM62524.1| unknown [Arabidopsis
           thaliana] gi|98961015|gb|ABF58991.1| At1g28395
           [Arabidopsis thaliana] gi|110736256|dbj|BAF00098.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332192847|gb|AEE30968.1| uncharacterized protein
           [Arabidopsis thaliana] gi|332192848|gb|AEE30969.1|
           uncharacterized protein [Arabidopsis thaliana]
           gi|332192849|gb|AEE30970.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 95

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/52 (65%), Positives = 45/52 (86%), Gaps = 4/52 (7%)
 Frame = -3

Query: 145 SSQPKP----ARSSFRLPKQTPLTNCIFRAPVEMSCAVESLMPFHTATASAL 2
           S+ PKP    AR++FR+PKQ+PLTN IFR+PVE+SC VE+++P+HTATASAL
Sbjct: 23  SAGPKPMPSSARTAFRMPKQSPLTNRIFRSPVELSCCVETMLPYHTATASAL 74


>ref|XP_002893527.1| hypothetical protein ARALYDRAFT_313543 [Arabidopsis lyrata subsp.
           lyrata] gi|297339369|gb|EFH69786.1| hypothetical protein
           ARALYDRAFT_313543 [Arabidopsis lyrata subsp. lyrata]
          Length = 95

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/52 (65%), Positives = 45/52 (86%), Gaps = 4/52 (7%)
 Frame = -3

Query: 145 SSQPKP----ARSSFRLPKQTPLTNCIFRAPVEMSCAVESLMPFHTATASAL 2
           S+ PKP    ARS+FR+PKQ+PL+N IFR+PVE+SC VE+++P+HTATASAL
Sbjct: 23  STGPKPMPSSARSAFRMPKQSPLSNRIFRSPVELSCCVETMLPYHTATASAL 74


>ref|XP_002881310.1| hypothetical protein ARALYDRAFT_902473 [Arabidopsis lyrata subsp.
           lyrata] gi|297327149|gb|EFH57569.1| hypothetical protein
           ARALYDRAFT_902473 [Arabidopsis lyrata subsp. lyrata]
          Length = 99

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/50 (66%), Positives = 45/50 (90%), Gaps = 2/50 (4%)
 Frame = -3

Query: 145 SSQPKP--ARSSFRLPKQTPLTNCIFRAPVEMSCAVESLMPFHTATASAL 2
           S++P P  ARSSF+LPKQ+PL++ IFR+PVE+SC VE+++P+HTATASAL
Sbjct: 22  STKPTPYSARSSFKLPKQSPLSHRIFRSPVELSCCVETMLPYHTATASAL 71


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