BLASTX nr result

ID: Coptis25_contig00024944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024944
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003593271.1| hypothetical protein MTR_2g009630 [Medicago ...   194   8e-55
gb|ACJ85902.1| unknown [Medicago truncatula]                          194   8e-55
ref|XP_002268351.1| PREDICTED: uncharacterized protein LOC100267...   193   1e-54
ref|NP_849487.1| uncharacterized protein [Arabidopsis thaliana] ...   186   1e-52
ref|NP_001119110.1| uncharacterized protein [Arabidopsis thalian...   186   1e-52

>ref|XP_003593271.1| hypothetical protein MTR_2g009630 [Medicago truncatula]
            gi|87162749|gb|ABD28544.1| hypothetical protein
            MtrDRAFT_AC148971g6v2 [Medicago truncatula]
            gi|355482319|gb|AES63522.1| hypothetical protein
            MTR_2g009630 [Medicago truncatula]
            gi|388496300|gb|AFK36216.1| unknown [Medicago truncatula]
          Length = 197

 Score =  194 bits (494), Expect(2) = 8e-55
 Identities = 88/133 (66%), Positives = 110/133 (82%)
 Frame = -1

Query: 1012 SSSAPNLRQRRVRTDPFLVICRCFGLVTSLTAILCITVNVVTAVRSFKNSSDIFDVIFRC 833
            SSS+ + R+   R DPFL++CRCF L+TSL AILC+ VNV++AVRSFKN + IFD IFRC
Sbjct: 18   SSSSSSTRRVERRADPFLIVCRCFSLITSLAAILCVAVNVLSAVRSFKNPNTIFDGIFRC 77

Query: 832  YVIVFAVFVIMAETEWPFFFKFWRVLEYWAGRGMLQIFVAVMTRAFPEANKKRKDLMLLQ 653
            Y ++ A+FV++ ETEW F  KFW+VLEYWAGRGMLQIF AVMTRAFP+ N +RKDL++LQ
Sbjct: 78   YAVLIAIFVVLVETEWSFIIKFWQVLEYWAGRGMLQIFAAVMTRAFPDYNGERKDLVILQ 137

Query: 652  EIASYLLLACGVI 614
             IA YLLL+CGV+
Sbjct: 138  NIACYLLLSCGVV 150



 Score = 46.6 bits (109), Expect(2) = 8e-55
 Identities = 20/28 (71%), Positives = 25/28 (89%)
 Frame = -3

Query: 533 IILGVLCIGFLKRARQVKEVTRDQAAKD 450
           +I GVLC+GFLKR RQ +E+TR+QAAKD
Sbjct: 152 VISGVLCVGFLKRRRQKQEITREQAAKD 179


>gb|ACJ85902.1| unknown [Medicago truncatula]
          Length = 191

 Score =  194 bits (494), Expect(2) = 8e-55
 Identities = 88/133 (66%), Positives = 110/133 (82%)
 Frame = -1

Query: 1012 SSSAPNLRQRRVRTDPFLVICRCFGLVTSLTAILCITVNVVTAVRSFKNSSDIFDVIFRC 833
            SSS+ + R+   R DPFL++CRCF L+TSL AILC+ VNV++AVRSFKN + IFD IFRC
Sbjct: 18   SSSSSSTRRVERRADPFLIVCRCFSLITSLAAILCVAVNVLSAVRSFKNPNTIFDGIFRC 77

Query: 832  YVIVFAVFVIMAETEWPFFFKFWRVLEYWAGRGMLQIFVAVMTRAFPEANKKRKDLMLLQ 653
            Y ++ A+FV++ ETEW F  KFW+VLEYWAGRGMLQIF AVMTRAFP+ N +RKDL++LQ
Sbjct: 78   YAVLIAIFVVLVETEWSFIIKFWQVLEYWAGRGMLQIFAAVMTRAFPDYNGERKDLVILQ 137

Query: 652  EIASYLLLACGVI 614
             IA YLLL+CGV+
Sbjct: 138  NIACYLLLSCGVV 150



 Score = 46.6 bits (109), Expect(2) = 8e-55
 Identities = 20/28 (71%), Positives = 25/28 (89%)
 Frame = -3

Query: 533 IILGVLCIGFLKRARQVKEVTRDQAAKD 450
           +I GVLC+GFLKR RQ +E+TR+QAAKD
Sbjct: 152 VISGVLCVGFLKRRRQKQEITREQAAKD 179


>ref|XP_002268351.1| PREDICTED: uncharacterized protein LOC100267500 [Vitis vinifera]
            gi|296087430|emb|CBI34019.3| unnamed protein product
            [Vitis vinifera]
          Length = 196

 Score =  193 bits (491), Expect(2) = 1e-54
 Identities = 89/133 (66%), Positives = 111/133 (83%)
 Frame = -1

Query: 1012 SSSAPNLRQRRVRTDPFLVICRCFGLVTSLTAILCITVNVVTAVRSFKNSSDIFDVIFRC 833
            SS++    + R R DP L++CRCF  +T+LTAILCI VNV++AVRSFK+ SD+FD IFRC
Sbjct: 15   SSTSGAAARVRARGDPLLIVCRCFSFITALTAILCICVNVLSAVRSFKDGSDVFDGIFRC 74

Query: 832  YVIVFAVFVIMAETEWPFFFKFWRVLEYWAGRGMLQIFVAVMTRAFPEANKKRKDLMLLQ 653
            Y +V A+FV++AETEW F  KFW++LEYWAGRGMLQIFVAVMTRAFP  + K+KDL+LLQ
Sbjct: 75   YAVVIALFVVVAETEWGFIMKFWKMLEYWAGRGMLQIFVAVMTRAFPNESSKQKDLVLLQ 134

Query: 652  EIASYLLLACGVI 614
             IASY+LLACG+I
Sbjct: 135  NIASYMLLACGLI 147



 Score = 47.0 bits (110), Expect(2) = 1e-54
 Identities = 21/28 (75%), Positives = 25/28 (89%)
 Frame = -3

Query: 533 IILGVLCIGFLKRARQVKEVTRDQAAKD 450
           +I G+LCIGFLKRARQ KEV+R+QA KD
Sbjct: 149 VISGILCIGFLKRARQKKEVSREQAIKD 176


>ref|NP_849487.1| uncharacterized protein [Arabidopsis thaliana]
           gi|26451440|dbj|BAC42819.1| unknown protein [Arabidopsis
           thaliana] gi|107738160|gb|ABF83652.1| At4g33625
           [Arabidopsis thaliana] gi|332660855|gb|AEE86255.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 200

 Score =  186 bits (473), Expect(2) = 1e-52
 Identities = 88/121 (72%), Positives = 102/121 (84%)
 Frame = -1

Query: 976 RTDPFLVICRCFGLVTSLTAILCITVNVVTAVRSFKNSSDIFDVIFRCYVIVFAVFVIMA 797
           R DPFLV+CRCF LVTSL AILC+ VNV+ AVRSF++S D+FD IFRCY +V A FV++ 
Sbjct: 26  RADPFLVVCRCFSLVTSLIAILCVVVNVLAAVRSFRDSHDLFDGIFRCYAVVIACFVVLV 85

Query: 796 ETEWPFFFKFWRVLEYWAGRGMLQIFVAVMTRAFPEANKKRKDLMLLQEIASYLLLACGV 617
           ETEW F  KF +VLEYWAGRGMLQIFVAVMTRAFP+   ++KDL+LLQ IASYLLLACGV
Sbjct: 86  ETEWGFILKFSKVLEYWAGRGMLQIFVAVMTRAFPDYMTQKKDLLLLQNIASYLLLACGV 145

Query: 616 I 614
           I
Sbjct: 146 I 146



 Score = 47.8 bits (112), Expect(2) = 1e-52
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -3

Query: 533 IILGVLCIGFLKRARQVKEVTRDQAAKD 450
           +I GVLCIGFLKRARQ KEV+R+QA KD
Sbjct: 148 VISGVLCIGFLKRARQQKEVSREQAVKD 175


>ref|NP_001119110.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332660856|gb|AEE86256.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 199

 Score =  186 bits (473), Expect(2) = 1e-52
 Identities = 88/121 (72%), Positives = 102/121 (84%)
 Frame = -1

Query: 976 RTDPFLVICRCFGLVTSLTAILCITVNVVTAVRSFKNSSDIFDVIFRCYVIVFAVFVIMA 797
           R DPFLV+CRCF LVTSL AILC+ VNV+ AVRSF++S D+FD IFRCY +V A FV++ 
Sbjct: 26  RADPFLVVCRCFSLVTSLIAILCVVVNVLAAVRSFRDSHDLFDGIFRCYAVVIACFVVLV 85

Query: 796 ETEWPFFFKFWRVLEYWAGRGMLQIFVAVMTRAFPEANKKRKDLMLLQEIASYLLLACGV 617
           ETEW F  KF +VLEYWAGRGMLQIFVAVMTRAFP+   ++KDL+LLQ IASYLLLACGV
Sbjct: 86  ETEWGFILKFSKVLEYWAGRGMLQIFVAVMTRAFPDYMTQKKDLLLLQNIASYLLLACGV 145

Query: 616 I 614
           I
Sbjct: 146 I 146



 Score = 47.8 bits (112), Expect(2) = 1e-52
 Identities = 22/28 (78%), Positives = 25/28 (89%)
 Frame = -3

Query: 533 IILGVLCIGFLKRARQVKEVTRDQAAKD 450
           +I GVLCIGFLKRARQ KEV+R+QA KD
Sbjct: 148 VISGVLCIGFLKRARQQKEVSREQAVKD 175


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