BLASTX nr result
ID: Coptis25_contig00024939
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024939 (239 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing ... 115 3e-24 ref|XP_002524282.1| nucleic acid binding protein, putative [Rici... 115 5e-24 ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|2... 115 5e-24 ref|NP_001043830.2| Os01g0672700 [Oryza sativa Japonica Group] g... 113 2e-23 ref|XP_003566984.1| PREDICTED: PAP-associated domain-containing ... 113 2e-23 >ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing protein 5-like [Vitis vinifera] gi|302143015|emb|CBI20310.3| unnamed protein product [Vitis vinifera] Length = 497 Score = 115 bits (289), Expect = 3e-24 Identities = 55/71 (77%), Positives = 62/71 (87%) Frame = +2 Query: 26 FCEFLSPTLEEQAARNACVECVFGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVVILDSK 205 F +FLSPT +EQ+ARNA +E VF VI++IWPNC VEVFGSFKTGLYLPTSDIDVVIL S Sbjct: 112 FSDFLSPTPKEQSARNAAIESVFNVIRYIWPNCKVEVFGSFKTGLYLPTSDIDVVILGSD 171 Query: 206 VKTPQIGLVAL 238 +KTPQIGL AL Sbjct: 172 IKTPQIGLYAL 182 >ref|XP_002524282.1| nucleic acid binding protein, putative [Ricinus communis] gi|223536473|gb|EEF38121.1| nucleic acid binding protein, putative [Ricinus communis] Length = 526 Score = 115 bits (287), Expect = 5e-24 Identities = 54/71 (76%), Positives = 60/71 (84%) Frame = +2 Query: 26 FCEFLSPTLEEQAARNACVECVFGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVVILDSK 205 FC+FLSPT EE+ ARN V+CVF VIK+IWPNC VEVFGS+KTGLYLPTSDIDVVI S Sbjct: 132 FCDFLSPTPEEEDARNTAVKCVFDVIKYIWPNCKVEVFGSYKTGLYLPTSDIDVVIFRSG 191 Query: 206 VKTPQIGLVAL 238 +K PQIGL AL Sbjct: 192 IKNPQIGLQAL 202 >ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|222869762|gb|EEF06893.1| predicted protein [Populus trichocarpa] Length = 543 Score = 115 bits (287), Expect = 5e-24 Identities = 55/71 (77%), Positives = 61/71 (85%) Frame = +2 Query: 26 FCEFLSPTLEEQAARNACVECVFGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVVILDSK 205 FC+FLSPT EEQA+R V CVF VIK+IWPNC VEVFGSF+TGLYLPTSDIDVVIL S Sbjct: 132 FCDFLSPTQEEQASRAEAVRCVFDVIKYIWPNCKVEVFGSFRTGLYLPTSDIDVVILGSG 191 Query: 206 VKTPQIGLVAL 238 +K+PQIGL AL Sbjct: 192 LKSPQIGLNAL 202 >ref|NP_001043830.2| Os01g0672700 [Oryza sativa Japonica Group] gi|56201854|dbj|BAD73304.1| polymerase (DNA directed) sigma-like [Oryza sativa Japonica Group] gi|56201907|dbj|BAD73357.1| polymerase (DNA directed) sigma-like [Oryza sativa Japonica Group] gi|255673541|dbj|BAF05744.2| Os01g0672700 [Oryza sativa Japonica Group] Length = 578 Score = 113 bits (282), Expect = 2e-23 Identities = 51/71 (71%), Positives = 61/71 (85%) Frame = +2 Query: 26 FCEFLSPTLEEQAARNACVECVFGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVVILDSK 205 FC+F+SP+ EEQ++R A V+ V VIKHIWP C VEVFGSF+TGL+LPTSDIDVVI DS+ Sbjct: 149 FCDFISPSAEEQSSRTAAVKAVSNVIKHIWPQCKVEVFGSFRTGLFLPTSDIDVVIFDSR 208 Query: 206 VKTPQIGLVAL 238 VKTPQ+GL AL Sbjct: 209 VKTPQVGLYAL 219 >ref|XP_003566984.1| PREDICTED: PAP-associated domain-containing protein 5-like [Brachypodium distachyon] Length = 619 Score = 113 bits (282), Expect = 2e-23 Identities = 50/71 (70%), Positives = 62/71 (87%) Frame = +2 Query: 26 FCEFLSPTLEEQAARNACVECVFGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVVILDSK 205 FC+F+SP+ EEQ++R A V+ V V+KHIWP+C VEVFGSF+TGLYLPTSDIDVVI +S+ Sbjct: 183 FCDFISPSAEEQSSRTAAVQAVSDVVKHIWPHCKVEVFGSFRTGLYLPTSDIDVVIFESR 242 Query: 206 VKTPQIGLVAL 238 VKTPQ+GL AL Sbjct: 243 VKTPQVGLYAL 253