BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024939
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing ...   115   3e-24
ref|XP_002524282.1| nucleic acid binding protein, putative [Rici...   115   5e-24
ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
ref|NP_001043830.2| Os01g0672700 [Oryza sativa Japonica Group] g...   113   2e-23
ref|XP_003566984.1| PREDICTED: PAP-associated domain-containing ...   113   2e-23

>ref|XP_002282332.2| PREDICTED: PAP-associated domain-containing protein 5-like [Vitis
           vinifera] gi|302143015|emb|CBI20310.3| unnamed protein
           product [Vitis vinifera]
          Length = 497

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/71 (77%), Positives = 62/71 (87%)
 Frame = +2

Query: 26  FCEFLSPTLEEQAARNACVECVFGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVVILDSK 205
           F +FLSPT +EQ+ARNA +E VF VI++IWPNC VEVFGSFKTGLYLPTSDIDVVIL S 
Sbjct: 112 FSDFLSPTPKEQSARNAAIESVFNVIRYIWPNCKVEVFGSFKTGLYLPTSDIDVVILGSD 171

Query: 206 VKTPQIGLVAL 238
           +KTPQIGL AL
Sbjct: 172 IKTPQIGLYAL 182


>ref|XP_002524282.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223536473|gb|EEF38121.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 526

 Score =  115 bits (287), Expect = 5e-24
 Identities = 54/71 (76%), Positives = 60/71 (84%)
 Frame = +2

Query: 26  FCEFLSPTLEEQAARNACVECVFGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVVILDSK 205
           FC+FLSPT EE+ ARN  V+CVF VIK+IWPNC VEVFGS+KTGLYLPTSDIDVVI  S 
Sbjct: 132 FCDFLSPTPEEEDARNTAVKCVFDVIKYIWPNCKVEVFGSYKTGLYLPTSDIDVVIFRSG 191

Query: 206 VKTPQIGLVAL 238
           +K PQIGL AL
Sbjct: 192 IKNPQIGLQAL 202


>ref|XP_002329093.1| predicted protein [Populus trichocarpa] gi|222869762|gb|EEF06893.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/71 (77%), Positives = 61/71 (85%)
 Frame = +2

Query: 26  FCEFLSPTLEEQAARNACVECVFGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVVILDSK 205
           FC+FLSPT EEQA+R   V CVF VIK+IWPNC VEVFGSF+TGLYLPTSDIDVVIL S 
Sbjct: 132 FCDFLSPTQEEQASRAEAVRCVFDVIKYIWPNCKVEVFGSFRTGLYLPTSDIDVVILGSG 191

Query: 206 VKTPQIGLVAL 238
           +K+PQIGL AL
Sbjct: 192 LKSPQIGLNAL 202


>ref|NP_001043830.2| Os01g0672700 [Oryza sativa Japonica Group]
           gi|56201854|dbj|BAD73304.1| polymerase (DNA directed)
           sigma-like [Oryza sativa Japonica Group]
           gi|56201907|dbj|BAD73357.1| polymerase (DNA directed)
           sigma-like [Oryza sativa Japonica Group]
           gi|255673541|dbj|BAF05744.2| Os01g0672700 [Oryza sativa
           Japonica Group]
          Length = 578

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/71 (71%), Positives = 61/71 (85%)
 Frame = +2

Query: 26  FCEFLSPTLEEQAARNACVECVFGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVVILDSK 205
           FC+F+SP+ EEQ++R A V+ V  VIKHIWP C VEVFGSF+TGL+LPTSDIDVVI DS+
Sbjct: 149 FCDFISPSAEEQSSRTAAVKAVSNVIKHIWPQCKVEVFGSFRTGLFLPTSDIDVVIFDSR 208

Query: 206 VKTPQIGLVAL 238
           VKTPQ+GL AL
Sbjct: 209 VKTPQVGLYAL 219


>ref|XP_003566984.1| PREDICTED: PAP-associated domain-containing protein 5-like
           [Brachypodium distachyon]
          Length = 619

 Score =  113 bits (282), Expect = 2e-23
 Identities = 50/71 (70%), Positives = 62/71 (87%)
 Frame = +2

Query: 26  FCEFLSPTLEEQAARNACVECVFGVIKHIWPNCNVEVFGSFKTGLYLPTSDIDVVILDSK 205
           FC+F+SP+ EEQ++R A V+ V  V+KHIWP+C VEVFGSF+TGLYLPTSDIDVVI +S+
Sbjct: 183 FCDFISPSAEEQSSRTAAVQAVSDVVKHIWPHCKVEVFGSFRTGLYLPTSDIDVVIFESR 242

Query: 206 VKTPQIGLVAL 238
           VKTPQ+GL AL
Sbjct: 243 VKTPQVGLYAL 253