BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024932
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26175.3| unnamed protein product [Vitis vinifera]              190   9e-47
ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containi...   190   9e-47
ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea m...   181   7e-44

>emb|CBI26175.3| unnamed protein product [Vitis vinifera]
          Length = 619

 Score =  190 bits (483), Expect = 9e-47
 Identities = 85/122 (69%), Positives = 103/122 (84%)
 Frame = +1

Query: 1   DMYAKCGSISTALEEFHRLQDRIISISPWNAIICGLAIHGHADMSLRVFSDLQRTHIRPN 180
           DMYAKCGSI+ AL+ F+ +QDR+ S+SPWNAIICGLA+HGHA++SL++FS LQR  I+PN
Sbjct: 416 DMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPN 475

Query: 181 SITFIGVLSACCHAGLIEQGEWYFDSMKRVYGIEPNIKHYGCMVDLFGRCGRLAEAERLI 360
           SITFIGVLSACCHAGL++ GE YF  MK +Y IEPNIKHYGCM+DL GR GRL EA  +I
Sbjct: 476 SITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMI 535

Query: 361 MR 366
            +
Sbjct: 536 RK 537


>ref|XP_002277532.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial [Vitis vinifera]
          Length = 694

 Score =  190 bits (483), Expect = 9e-47
 Identities = 85/122 (69%), Positives = 103/122 (84%)
 Frame = +1

Query: 1   DMYAKCGSISTALEEFHRLQDRIISISPWNAIICGLAIHGHADMSLRVFSDLQRTHIRPN 180
           DMYAKCGSI+ AL+ F+ +QDR+ S+SPWNAIICGLA+HGHA++SL++FS LQR  I+PN
Sbjct: 491 DMYAKCGSITIALQLFYEIQDRVSSVSPWNAIICGLAMHGHANVSLKLFSQLQRVRIKPN 550

Query: 181 SITFIGVLSACCHAGLIEQGEWYFDSMKRVYGIEPNIKHYGCMVDLFGRCGRLAEAERLI 360
           SITFIGVLSACCHAGL++ GE YF  MK +Y IEPNIKHYGCM+DL GR GRL EA  +I
Sbjct: 551 SITFIGVLSACCHAGLVDTGEKYFKGMKNLYNIEPNIKHYGCMIDLLGRAGRLKEAAEMI 610

Query: 361 MR 366
            +
Sbjct: 611 RK 612


>ref|XP_004165441.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
           mitochondrial-like isoform 1 [Cucumis sativus]
          Length = 703

 Score =  182 bits (462), Expect = 2e-44
 Identities = 82/120 (68%), Positives = 102/120 (85%)
 Frame = +1

Query: 1   DMYAKCGSISTALEEFHRLQDRIISISPWNAIICGLAIHGHADMSLRVFSDLQRTHIRPN 180
           DMYAKCGSI TAL+ F +++D+  ++SPWNAIICGLA+HGHA++SL +FS+LQR  I+ N
Sbjct: 500 DMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLN 559

Query: 181 SITFIGVLSACCHAGLIEQGEWYFDSMKRVYGIEPNIKHYGCMVDLFGRCGRLAEAERLI 360
           SITF+GVLSACCHAGL+E GE YF SMK  +G+EPNIKHYGC+VDL GR GRL EAE ++
Sbjct: 560 SITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIV 619


>ref|XP_004150326.1| PREDICTED: pentatricopeptide repeat-containing protein At5g19020,
            mitochondrial-like [Cucumis sativus]
          Length = 874

 Score =  182 bits (462), Expect = 2e-44
 Identities = 82/120 (68%), Positives = 102/120 (85%)
 Frame = +1

Query: 1    DMYAKCGSISTALEEFHRLQDRIISISPWNAIICGLAIHGHADMSLRVFSDLQRTHIRPN 180
            DMYAKCGSI TAL+ F +++D+  ++SPWNAIICGLA+HGHA++SL +FS+LQR  I+ N
Sbjct: 671  DMYAKCGSIDTALDVFRQIKDKTSTVSPWNAIICGLAMHGHANLSLEIFSNLQRRSIKLN 730

Query: 181  SITFIGVLSACCHAGLIEQGEWYFDSMKRVYGIEPNIKHYGCMVDLFGRCGRLAEAERLI 360
            SITF+GVLSACCHAGL+E GE YF SMK  +G+EPNIKHYGC+VDL GR GRL EAE ++
Sbjct: 731  SITFLGVLSACCHAGLVEVGERYFWSMKTQHGVEPNIKHYGCLVDLLGRVGRLREAEEIV 790


>tpg|DAA62092.1| TPA: hypothetical protein ZEAMMB73_488923 [Zea mays]
          Length = 714

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/120 (68%), Positives = 101/120 (84%)
 Frame = +1

Query: 1   DMYAKCGSISTALEEFHRLQDRIISISPWNAIICGLAIHGHADMSLRVFSDLQRTHIRPN 180
           DMYAKCGSI+ A++ F+R+ D+  S+SPWNA+IC LAIHG+A MSL +FS LQRT I+PN
Sbjct: 452 DMYAKCGSIADAVQFFNRVNDKFSSVSPWNAMICSLAIHGYAHMSLDLFSQLQRTSIKPN 511

Query: 181 SITFIGVLSACCHAGLIEQGEWYFDSMKRVYGIEPNIKHYGCMVDLFGRCGRLAEAERLI 360
           SITFIGVLSACCHAG + +G++YF+SM R YGI+P IKHYGCMVDL GR G L EAE+L+
Sbjct: 512 SITFIGVLSACCHAGTVTKGKYYFESMTREYGIQPTIKHYGCMVDLLGRAGYLEEAEQLV 571



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/117 (30%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = +1

Query: 19  GSISTALEEFHRLQDRIISISPWNAIICGLAIHGHADMSLRVFSDLQRTHIRPNSITFIG 198
           G I  A E F  + +R      W+ +I G    G +DM+L++F  +  T I PN +T   
Sbjct: 357 GLIREARELFDDMPER--DTVSWSTMISGYVQTGRSDMALKLFYSMLNTSIEPNEVTLAS 414

Query: 199 VLSACCHAGLIEQGEWYFD-SMKRVYGIEPNIKHYGCMVDLFGRCGRLAEAERLIMR 366
            LSA   +G ++QG+W  D  M R   +  N+     ++D++ +CG +A+A +   R
Sbjct: 415 ALSAIADSGTLDQGKWIHDYIMNRPVQLTDNLS--SGLIDMYAKCGSIADAVQFFNR 469