BLASTX nr result
ID: Coptis25_contig00024922
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00024922
(571 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera] 51 1e-13
emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera] 54 1e-12
emb|CAN74843.1| hypothetical protein VITISV_037042 [Vitis vinifera] 52 3e-12
emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera] 48 4e-12
emb|CAN78431.1| hypothetical protein VITISV_022851 [Vitis vinifera] 52 4e-12
>emb|CAN64220.1| hypothetical protein VITISV_014001 [Vitis vinifera]
Length = 1937
Score = 50.8 bits (120), Expect(3) = 1e-13
Identities = 27/89 (30%), Positives = 44/89 (49%)
Frame = +2
Query: 110 LWKGIHCVLPTFKSGIQFKVCNGNK*LCWLDIWAGDKALAELFPLIYHASNNRRSLFHEH 289
+WK I F+S +F + +G + W D+W G++AL E FP++++ S N+ E
Sbjct: 1638 VWKAIRNGXENFRSHSRFIIGDGTRVKFWKDLWCGNQALEEAFPILFNLSVNKDGWVAEA 1697
Query: 290 AYIVNNQLAWNLFLRRCSNDWEVQQFANL 376
+W R NDWEV + +L
Sbjct: 1698 WEEEEVGGSWGPRFNRHLNDWEVGEVESL 1726
Score = 38.1 bits (87), Expect(3) = 1e-13
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 3 WLWRYLTEEGSLWHGVIISKYGFAQHCW*PNCVTEYYG 116
WLWR+ E SLW +I SKY + W V + YG
Sbjct: 1598 WLWRFANENESLWKQIISSKYDLQEGGWCSKGVRDRYG 1635
Score = 31.6 bits (70), Expect(3) = 1e-13
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 448 KNGLFSVSSFYGILTIEVRNQEYQSPSFPFKLVWQ--VPI 561
KNG FSV SFY +L+ + + P FP + +W VPI
Sbjct: 1749 KNGSFSVKSFYSLLSRDTK------PPFPARTIWTPWVPI 1782
>emb|CAN77850.1| hypothetical protein VITISV_020834 [Vitis vinifera]
Length = 1905
Score = 53.5 bits (127), Expect(3) = 1e-12
Identities = 27/89 (30%), Positives = 45/89 (50%)
Frame = +2
Query: 110 LWKGIHCVLPTFKSGIQFKVCNGNK*LCWLDIWAGDKALAELFPLIYHASNNRRSLFHEH 289
+WK I F+S +F + +G + W D+W G+++L E FP++++ S N+ E
Sbjct: 1606 VWKAIRKGWENFRSHSRFIIGDGTRVKFWKDLWCGNQSLEEAFPILFNLSVNKEGWVAEA 1665
Query: 290 AYIVNNQLAWNLFLRRCSNDWEVQQFANL 376
+W L R NDWEV + +L
Sbjct: 1666 WEEDEGGGSWGLRFNRHLNDWEVGEVESL 1694
Score = 35.4 bits (80), Expect(3) = 1e-12
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +3
Query: 3 WLWRYLTEEGSLWHGVIISKYGFAQHCW*PNCVTEYYG 116
WLWR+ E LW +I+SKY + W YG
Sbjct: 1566 WLWRFANENEPLWKHIILSKYDLQEGGWCSKDARNRYG 1603
Score = 28.1 bits (61), Expect(3) = 1e-12
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +1
Query: 448 KNGLFSVSSFYGILTIEVRNQEYQSPSFPFKLVWQ--VPI 561
KNG FSV SFY + + P FP + +W VPI
Sbjct: 1717 KNGTFSVKSFYSSFSRD------SKPPFPARTIWTPWVPI 1750
>emb|CAN74843.1| hypothetical protein VITISV_037042 [Vitis vinifera]
Length = 1296
Score = 52.0 bits (123), Expect(3) = 3e-12
Identities = 28/89 (31%), Positives = 44/89 (49%)
Frame = +2
Query: 110 LWKGIHCVLPTFKSGIQFKVCNGNK*LCWLDIWAGDKALAELFPLIYHASNNRRSLFHEH 289
+WK I F+S +F V +G + W D+W +++L E FP++++ S N+ L E
Sbjct: 997 VWKAIRNGWENFRSHSRFLVGDGTRVKFWKDLWCENQSLEEAFPILFNLSVNKEGLVAEA 1056
Query: 290 AYIVNNQLAWNLFLRRCSNDWEVQQFANL 376
+W R NDWEV + NL
Sbjct: 1057 WEEDGAGGSWGPRFNRHLNDWEVGEVENL 1085
Score = 37.4 bits (85), Expect(3) = 3e-12
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 3 WLWRYLTEEGSLWHGVIISKYGFAQHCW*PNCVTEYYG 116
WLWR+ E SLW +I SKY W V + YG
Sbjct: 957 WLWRFANENESLWKQIISSKYDLQDGGWCSKGVRDRYG 994
Score = 26.9 bits (58), Expect(3) = 3e-12
Identities = 14/43 (32%), Positives = 20/43 (46%)
Frame = +1
Query: 421 DDRCLRRMMKNGLFSVSSFYGILTIEVRNQEYQSPSFPFKLVW 549
DD + KNG FSV FY L++ + + FP +W
Sbjct: 1099 DDSLRWKANKNGTFSVKCFYSSLSMGINH------PFPASTIW 1135
>emb|CAN74183.1| hypothetical protein VITISV_034261 [Vitis vinifera]
Length = 1201
Score = 47.8 bits (112), Expect(3) = 4e-12
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Frame = +2
Query: 110 LWKGIHCVLPTFKSGIQFKVCNGNK*LCWLDIWAGDKALAELFPLIYH-ASNNRRSLFHE 286
LWK I F + + NG + W D+W GD L +LFPL++ A+NN +
Sbjct: 898 LWKDIRKGWEEFFLRTRIHIGNGRRTRFWWDMWVGDSKLKDLFPLLFRIAANNSAIVADL 957
Query: 287 HAYIVNNQLAWNLFLRRCSNDWEVQQFANLTMILDVVEITD 409
W + RR DWE+++ + V + +
Sbjct: 958 WGRQEGGGGGWEVHFRRPFQDWELEEVNRFLGYISAVRVQE 998
Score = 40.4 bits (93), Expect(3) = 4e-12
Identities = 18/38 (47%), Positives = 21/38 (55%)
Frame = +3
Query: 3 WLWRYLTEEGSLWHGVIISKYGFAQHCW*PNCVTEYYG 116
WLWR+ E SLW VI+ K+G Q W V E YG
Sbjct: 858 WLWRFPIERESLWRRVIVGKFGEVQGGWTTREVRESYG 895
Score = 27.3 bits (59), Expect(3) = 4e-12
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 421 DDRCLRRMMKNGLFSVSSFYGILTIEVRNQEYQSPSFPFKLVW 549
+D + ++ + G F V+S+Y L +E SP FP K VW
Sbjct: 1000 EDFLVWKIERKGTFKVNSYYRSL------KEDNSPLFPXKEVW 1036
>emb|CAN78431.1| hypothetical protein VITISV_022851 [Vitis vinifera]
Length = 1033
Score = 52.0 bits (123), Expect(3) = 4e-12
Identities = 26/89 (29%), Positives = 44/89 (49%)
Frame = +2
Query: 110 LWKGIHCVLPTFKSGIQFKVCNGNK*LCWLDIWAGDKALAELFPLIYHASNNRRSLFHEH 289
+WK I F+S +F + +G + W D+W G+++L E FP++++ S N+ E
Sbjct: 426 VWKAIRKGWENFRSHSRFIIGDGTRVKFWKDLWCGNQSLEEAFPILFNLSVNKEGWVAEA 485
Query: 290 AYIVNNQLAWNLFLRRCSNDWEVQQFANL 376
+W R NDWEV + +L
Sbjct: 486 WEEDEGGGSWGFRFNRHLNDWEVGEVESL 514
Score = 34.7 bits (78), Expect(3) = 4e-12
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +3
Query: 3 WLWRYLTEEGSLWHGVIISKYGFAQHCW 86
WLWR+ E LW +I+SKY + W
Sbjct: 386 WLWRFANENEPLWKQIILSKYDLQEGGW 413
Score = 28.9 bits (63), Expect(3) = 4e-12
Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 448 KNGLFSVSSFYGILTIEVRNQEYQSPSFPFKLVWQ--VPI 561
KNG FSV SFY + + + P FP + +W VPI
Sbjct: 537 KNGTFSVKSFYSSFSRDTK------PPFPARTIWTPWVPI 570