BLASTX nr result

ID: Coptis25_contig00024908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024908
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273534.2| PREDICTED: squamosa promoter-binding-like pr...    86   5e-15
ref|XP_004137448.1| PREDICTED: uncharacterized protein LOC101206...    74   2e-11
ref|XP_004168226.1| PREDICTED: squamosa promoter-binding-like pr...    73   4e-11
ref|XP_004138332.1| PREDICTED: uncharacterized protein LOC101221...    73   4e-11
ref|XP_002265203.1| PREDICTED: squamosa promoter-binding-like pr...    71   1e-10

>ref|XP_002273534.2| PREDICTED: squamosa promoter-binding-like protein 6-like [Vitis
           vinifera]
          Length = 611

 Score = 85.5 bits (210), Expect = 5e-15
 Identities = 60/157 (38%), Positives = 82/157 (52%), Gaps = 7/157 (4%)
 Frame = -1

Query: 450 VMEAWNYGSEEKGFVLSDEMVSNGDAVARSRTVVMGWDLMRSPFNYENTRLDSGGDVEVN 271
           +ME+W++  E+K F+ S+EM    DAV RSR ++ GWD MR+PFN+EN  L    D   +
Sbjct: 86  LMESWSHALEKKMFLYSEEMDLTTDAVGRSRKLLTGWD-MRTPFNFENDGLVLDRDAVES 144

Query: 270 QGFMDLGFSDMTRKQF---PAAGNYFGEYLDSKMSSGIVSSPSN----SKEFSQEXXXXX 112
             FM+L   D+ RK     P+ G   GE    + SS  + SP+N    +  F  E     
Sbjct: 145 MEFMELDSPDLVRKLLPSNPSVGFLSGEI--GRNSSKRIVSPTNMVTSNPIFGGEESSSR 202

Query: 111 XXXXXXXXXSRDSSLFDLKLGRLGDNQDTQVGNSSKE 1
                    S+DSS+ DLKLGRL D  D +    SKE
Sbjct: 203 LSSSFMESNSQDSSIIDLKLGRLADCIDAKNNRCSKE 239


>ref|XP_004137448.1| PREDICTED: uncharacterized protein LOC101206747 [Cucumis sativus]
           gi|449486905|ref|XP_004157437.1| PREDICTED:
           uncharacterized protein LOC101225600 [Cucumis sativus]
          Length = 548

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 54/152 (35%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
 Frame = -1

Query: 447 MEAWNYGSEEKGFVLSDEMVSNGDAVARSRTVVMGWDLMRSPFNY-ENTRLDSGGDVEVN 271
           ME+WNYGS+ KGF LSDEM S+ ++  RS+  ++GW+  ++P ++ +N  L SG     N
Sbjct: 1   MESWNYGSQGKGF-LSDEMNSSTNSPLRSKYSLLGWE-FKNPCSFGDNMLLTSGAQHVEN 58

Query: 270 QGFMDLGFSDMTRKQFPAAGNYFGEYLDSKMSSG---IVSSPSNSKEFSQEXXXXXXXXX 100
           Q F +L F  M  KQ P   +     L++K   G    +  P++     +E         
Sbjct: 59  QSFGELEFPQMVGKQLP--DDSVSGVLNTKTDGGRNLNLVLPTSHPLHGEEESTSKLSGS 116

Query: 99  XXXXXSRDSSLFDLKLGRLGDNQDTQVGNSSK 4
                +RDSSL DLKLGR  D  D      SK
Sbjct: 117 IVDSNNRDSSLIDLKLGRFIDQGDAHSSKYSK 148


>ref|XP_004168226.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Cucumis
           sativus]
          Length = 510

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
 Frame = -1

Query: 447 MEAWNYGSEEKGFVLSDEMVSNGDAVARSRTVVMGWDLMRSPFNYENTRLDSGGDVEVNQ 268
           ME+W+Y SE KG  +SDEM S   ++AR++  ++GW+  ++P ++ +T L +   V+ NQ
Sbjct: 1   MESWSYVSEGKG-CMSDEMNSPTSSLARNKDSLLGWEF-KNPCSFGSTMLPTSQQVD-NQ 57

Query: 267 GFMDLGFSDMTRKQFPAAGNYFGEYLDSKMSSGIVSSPSNSKEFS---QEXXXXXXXXXX 97
           GF +L F +M  KQ P   N   + L SK+  G   +P+ +   +   ++          
Sbjct: 58  GFGELVFPEMIGKQLP--DNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSI 115

Query: 96  XXXXSRDSSLFDLKLGRLGDNQD 28
               SRDSS  DLKLGR  D +D
Sbjct: 116 VDSSSRDSSFIDLKLGRFADQRD 138


>ref|XP_004138332.1| PREDICTED: uncharacterized protein LOC101221286 [Cucumis sativus]
          Length = 550

 Score = 72.8 bits (177), Expect = 4e-11
 Identities = 50/143 (34%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
 Frame = -1

Query: 447 MEAWNYGSEEKGFVLSDEMVSNGDAVARSRTVVMGWDLMRSPFNYENTRLDSGGDVEVNQ 268
           ME+W+Y SE KG  +SDEM S   ++AR++  ++GW+  ++P ++ +T L +   V+ NQ
Sbjct: 1   MESWSYVSEGKG-CMSDEMNSPTSSLARNKDSLLGWEF-KNPCSFGSTMLPTSQQVD-NQ 57

Query: 267 GFMDLGFSDMTRKQFPAAGNYFGEYLDSKMSSGIVSSPSNSKEFS---QEXXXXXXXXXX 97
           GF +L F +M  KQ P   N   + L SK+  G   +P+ +   +   ++          
Sbjct: 58  GFGELVFPEMIGKQLP--DNSVCDILSSKVVGGRFLNPAMNSSIAFLGEDESTSKLSSSI 115

Query: 96  XXXXSRDSSLFDLKLGRLGDNQD 28
               SRDSS  DLKLGR  D +D
Sbjct: 116 VDSSSRDSSFIDLKLGRFADQRD 138


>ref|XP_002265203.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Vitis
           vinifera]
          Length = 557

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 55/151 (36%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
 Frame = -1

Query: 447 MEAWNYGSEEKGFVLSDEMVSNGDAVARSRTVVMGWDLMRSPFNYENTRLDSGGDVEVNQ 268
           M +W+Y S+EK FV SD      ++ ARS+ V MGW+L ++P  Y N+ L S   V  NQ
Sbjct: 1   MGSWSYVSQEKEFV-SDATDLQPNSSARSKNVFMGWEL-KTPCGYGNSILVSSQQVIQNQ 58

Query: 267 GFMDLGFSDMTRKQFP---AAGNYFGEYLDSKMSSGIVSSPSNSKEFSQEXXXXXXXXXX 97
           GF + G  +M RKQ P         G+  D  M + I+ SP+       +          
Sbjct: 59  GFGEFGIPEMVRKQLPDNSIRDVSCGKGGDGIMVNSIMVSPNVFPR--DDESSSKLSSSV 116

Query: 96  XXXXSRDSSLFDLKLGRLGDNQDTQVGNSSK 4
               S+DS L DLKLGR  D+ D+Q    SK
Sbjct: 117 MESNSQDSLLIDLKLGRFADHSDSQNCKPSK 147


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