BLASTX nr result

ID: Coptis25_contig00024898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024898
         (347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72605.1| hypothetical protein VITISV_021336 [Vitis vinifera]   111   1e-27
ref|XP_002273352.1| PREDICTED: protein canopy homolog 1 [Vitis v...   111   1e-27
ref|XP_002510701.1| conserved hypothetical protein [Ricinus comm...   100   2e-23
ref|XP_002306987.1| predicted protein [Populus trichocarpa] gi|2...    99   2e-23
ref|XP_003527301.1| PREDICTED: protein canopy homolog 1-like [Gl...    98   1e-22

>emb|CAN72605.1| hypothetical protein VITISV_021336 [Vitis vinifera]
          Length = 200

 Score =  111 bits (277), Expect(2) = 1e-27
 Identities = 52/64 (81%), Positives = 59/64 (92%)
 Frame = -1

Query: 347 RVSELRVVELLDGLCEKMQEYTLDKLASTRHEWVKVDDWDSLTTDKREARAY*KDISSYC 168
           RVSELRVVELLDGLCEKMQ+YTL+K+ STR EWVKVDDWD++TT+K+EARAY KDISSYC
Sbjct: 81  RVSELRVVELLDGLCEKMQDYTLEKIDSTRREWVKVDDWDNITTNKQEARAYSKDISSYC 140

Query: 167 GSWL 156
           G  L
Sbjct: 141 GRLL 144



 Score = 37.0 bits (84), Expect(2) = 1e-27
 Identities = 20/36 (55%), Positives = 25/36 (69%)
 Frame = -3

Query: 165 KLAELIKKGFVKVGEVRN*GRF*CQDLSRQCIGTSA 58
           +LA+LIKKG VK GEV    +  CQDLS+ C  TS+
Sbjct: 150 ELADLIKKGSVKTGEV---SKVLCQDLSKHCSVTSS 182


>ref|XP_002273352.1| PREDICTED: protein canopy homolog 1 [Vitis vinifera]
           gi|297745574|emb|CBI40739.3| unnamed protein product
           [Vitis vinifera]
          Length = 187

 Score =  111 bits (277), Expect(2) = 1e-27
 Identities = 52/64 (81%), Positives = 59/64 (92%)
 Frame = -1

Query: 347 RVSELRVVELLDGLCEKMQEYTLDKLASTRHEWVKVDDWDSLTTDKREARAY*KDISSYC 168
           RVSELRVVELLDGLCEKMQ+YTL+K+ STR EWVKVDDWD++TT+K+EARAY KDISSYC
Sbjct: 68  RVSELRVVELLDGLCEKMQDYTLEKIDSTRREWVKVDDWDNITTNKQEARAYSKDISSYC 127

Query: 167 GSWL 156
           G  L
Sbjct: 128 GRLL 131



 Score = 36.6 bits (83), Expect(2) = 1e-27
 Identities = 20/35 (57%), Positives = 24/35 (68%)
 Frame = -3

Query: 165 KLAELIKKGFVKVGEVRN*GRF*CQDLSRQCIGTS 61
           +LA+LIKKG VK GEV    +  CQDLS+ C  TS
Sbjct: 137 ELADLIKKGSVKTGEV---SKVLCQDLSKHCSVTS 168


>ref|XP_002510701.1| conserved hypothetical protein [Ricinus communis]
           gi|223551402|gb|EEF52888.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 187

 Score =  100 bits (248), Expect(2) = 2e-23
 Identities = 47/64 (73%), Positives = 56/64 (87%)
 Frame = -1

Query: 347 RVSELRVVELLDGLCEKMQEYTLDKLASTRHEWVKVDDWDSLTTDKREARAY*KDISSYC 168
           RVSELRVVELLDGLC+KMQ+YTL K+ STR  WVKVD+WD+LTT+K+EARA+ K +SSYC
Sbjct: 71  RVSELRVVELLDGLCDKMQDYTLQKVDSTRSSWVKVDNWDNLTTNKQEARAFSKALSSYC 130

Query: 167 GSWL 156
           G  L
Sbjct: 131 GRLL 134



 Score = 34.3 bits (77), Expect(2) = 2e-23
 Identities = 19/37 (51%), Positives = 24/37 (64%)
 Frame = -3

Query: 165 KLAELIKKGFVKVGEVRN*GRF*CQDLSRQCIGTSAA 55
           +LAELIKKG VKVG V    +  C+DLS  C  +S +
Sbjct: 140 ELAELIKKGSVKVGGV---SKVLCEDLSNHCTHSSGS 173


>ref|XP_002306987.1| predicted protein [Populus trichocarpa] gi|222856436|gb|EEE93983.1|
           predicted protein [Populus trichocarpa]
          Length = 186

 Score = 99.4 bits (246), Expect(2) = 2e-23
 Identities = 46/64 (71%), Positives = 55/64 (85%)
 Frame = -1

Query: 347 RVSELRVVELLDGLCEKMQEYTLDKLASTRHEWVKVDDWDSLTTDKREARAY*KDISSYC 168
           RVSELRVVELLDGLC+KMQ+YTL K+ S R+EWV+VD WD+L  +K+EA+AY KDISSYC
Sbjct: 70  RVSELRVVELLDGLCDKMQDYTLQKVDSKRYEWVRVDSWDNLAINKQEAKAYSKDISSYC 129

Query: 167 GSWL 156
           G  L
Sbjct: 130 GRLL 133



 Score = 34.7 bits (78), Expect(2) = 2e-23
 Identities = 18/31 (58%), Positives = 22/31 (70%)
 Frame = -3

Query: 165 KLAELIKKGFVKVGEVRN*GRF*CQDLSRQC 73
           +LAE IKKG VKVG+V    +  CQDLS+ C
Sbjct: 139 ELAERIKKGSVKVGDV---SKILCQDLSKHC 166


>ref|XP_003527301.1| PREDICTED: protein canopy homolog 1-like [Glycine max]
          Length = 191

 Score = 97.8 bits (242), Expect(2) = 1e-22
 Identities = 48/64 (75%), Positives = 55/64 (85%)
 Frame = -1

Query: 347 RVSELRVVELLDGLCEKMQEYTLDKLASTRHEWVKVDDWDSLTTDKREARAY*KDISSYC 168
           RVSELRVVELLDGLCEKMQ+YTL K+ +  +EW KVD WD+LTT+K+EARAY KDISSYC
Sbjct: 76  RVSELRVVELLDGLCEKMQDYTL-KIDTNTYEWFKVDSWDNLTTNKQEARAYSKDISSYC 134

Query: 167 GSWL 156
           G  L
Sbjct: 135 GRLL 138



 Score = 33.5 bits (75), Expect(2) = 1e-22
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = -3

Query: 165 KLAELIKKGFVKVGEVRN*GRF*CQDLSRQC 73
           + AELIKKG VKVG V    +  CQDLS+ C
Sbjct: 144 EFAELIKKGSVKVGGV---SKVLCQDLSKHC 171


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