BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024891
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containi...   214   8e-54
emb|CBI33393.3| unnamed protein product [Vitis vinifera]              214   8e-54
ref|XP_002322556.1| predicted protein [Populus trichocarpa] gi|2...   204   6e-51
ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea ma...   191   5e-47
ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containi...   190   9e-47

>ref|XP_002271968.2| PREDICTED: pentatricopeptide repeat-containing protein At4g02750
           [Vitis vinifera]
          Length = 788

 Score =  214 bits (544), Expect = 8e-54
 Identities = 101/138 (73%), Positives = 121/138 (87%)
 Frame = +1

Query: 1   GKEAVQLFHEMKIKGLHPDQVTFVAVLSACTHSGLIDQGLILFKSMTEEHSIELLAEHYA 180
           G+EA++LFH+M+++G+ PD+VTFV +LSAC+H GLIDQGL LFK M + ++IE LAEHYA
Sbjct: 536 GREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYA 595

Query: 181 CVVDLLGRAGRLEEAYQLLIGMPIKANAGIWGALLGACRMHRNLELGKIAADKLCEFEPH 360
           C+VDLLGRAGRLEEA+QL+ GM I ANAGIWGALLGACR+H NLEL K AA+KL EFEPH
Sbjct: 596 CMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPH 655

Query: 361 KTSNYVLLSNIHAEAGEW 414
           KTSNYVLLSN+ AEAG W
Sbjct: 656 KTSNYVLLSNMQAEAGRW 673


>emb|CBI33393.3| unnamed protein product [Vitis vinifera]
          Length = 752

 Score =  214 bits (544), Expect = 8e-54
 Identities = 101/138 (73%), Positives = 121/138 (87%)
 Frame = +1

Query: 1   GKEAVQLFHEMKIKGLHPDQVTFVAVLSACTHSGLIDQGLILFKSMTEEHSIELLAEHYA 180
           G+EA++LFH+M+++G+ PD+VTFV +LSAC+H GLIDQGL LFK M + ++IE LAEHYA
Sbjct: 298 GREALKLFHKMEVEGVAPDEVTFVGILSACSHVGLIDQGLKLFKCMVQAYNIEPLAEHYA 357

Query: 181 CVVDLLGRAGRLEEAYQLLIGMPIKANAGIWGALLGACRMHRNLELGKIAADKLCEFEPH 360
           C+VDLLGRAGRLEEA+QL+ GM I ANAGIWGALLGACR+H NLEL K AA+KL EFEPH
Sbjct: 358 CMVDLLGRAGRLEEAFQLVRGMKINANAGIWGALLGACRIHGNLELAKFAAEKLLEFEPH 417

Query: 361 KTSNYVLLSNIHAEAGEW 414
           KTSNYVLLSN+ AEAG W
Sbjct: 418 KTSNYVLLSNMQAEAGRW 435


>ref|XP_002322556.1| predicted protein [Populus trichocarpa] gi|222867186|gb|EEF04317.1|
           predicted protein [Populus trichocarpa]
          Length = 702

 Score =  204 bits (519), Expect = 6e-51
 Identities = 93/138 (67%), Positives = 117/138 (84%)
 Frame = +1

Query: 1   GKEAVQLFHEMKIKGLHPDQVTFVAVLSACTHSGLIDQGLILFKSMTEEHSIELLAEHYA 180
           GKEA++LF EM  +G+ PD+VTF+ +LSAC H+G++D GL LFK M++ ++IE LAEHYA
Sbjct: 498 GKEALKLFEEMASEGMAPDEVTFIGILSACNHAGMVDHGLKLFKCMSKVYAIEPLAEHYA 557

Query: 181 CVVDLLGRAGRLEEAYQLLIGMPIKANAGIWGALLGACRMHRNLELGKIAADKLCEFEPH 360
           C+VDLLGR GRL+EA++++ GM +KA AG+WGALLGACR H NLELG++AA KL EFEPH
Sbjct: 558 CMVDLLGRVGRLDEAFEIVRGMKVKATAGVWGALLGACRAHGNLELGRLAAHKLSEFEPH 617

Query: 361 KTSNYVLLSNIHAEAGEW 414
           KTSNYVLLSNIHAEA  W
Sbjct: 618 KTSNYVLLSNIHAEANRW 635


>ref|NP_001141436.1| uncharacterized protein LOC100273546 [Zea mays]
           gi|194704572|gb|ACF86370.1| unknown [Zea mays]
           gi|414877969|tpg|DAA55100.1| TPA: hypothetical protein
           ZEAMMB73_905907 [Zea mays]
          Length = 700

 Score =  191 bits (485), Expect = 5e-47
 Identities = 87/138 (63%), Positives = 114/138 (82%)
 Frame = +1

Query: 1   GKEAVQLFHEMKIKGLHPDQVTFVAVLSACTHSGLIDQGLILFKSMTEEHSIELLAEHYA 180
           G EA+ +F EM+  G+ PD+VTFV +LSAC+H+GLID+GL  F SMT+E+ ++ +AEHYA
Sbjct: 538 GTEAIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYA 597

Query: 181 CVVDLLGRAGRLEEAYQLLIGMPIKANAGIWGALLGACRMHRNLELGKIAADKLCEFEPH 360
           C+VDLLGRAG+L EA++L+ GM I+ NAG+WGALLGAC MH+N EL ++AA++L E EP 
Sbjct: 598 CMVDLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSELEPR 657

Query: 361 KTSNYVLLSNIHAEAGEW 414
           K SNYVLLSNI AEAG+W
Sbjct: 658 KASNYVLLSNISAEAGKW 675


>ref|XP_003577575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 694

 Score =  190 bits (483), Expect = 9e-47
 Identities = 85/138 (61%), Positives = 115/138 (83%)
 Frame = +1

Query: 1   GKEAVQLFHEMKIKGLHPDQVTFVAVLSACTHSGLIDQGLILFKSMTEEHSIELLAEHYA 180
           G EA+ +F EM+   + PD+VTFV VLSAC+H+GLID+G   F SMT+++++  +AEHYA
Sbjct: 532 GTEAISVFREMEDNDVRPDEVTFVGVLSACSHAGLIDEGFDFFNSMTKDYALRPVAEHYA 591

Query: 181 CVVDLLGRAGRLEEAYQLLIGMPIKANAGIWGALLGACRMHRNLELGKIAADKLCEFEPH 360
           C+VDLLGR+GRL EA++++ GM ++ NAG+WGA+LGACR+H+N EL ++AA+KL E EPH
Sbjct: 592 CMVDLLGRSGRLSEAFEIIQGMQVQPNAGVWGAMLGACRVHKNHELAQLAAEKLYELEPH 651

Query: 361 KTSNYVLLSNIHAEAGEW 414
           KTSNYVLLSNI AEAG+W
Sbjct: 652 KTSNYVLLSNITAEAGKW 669