BLASTX nr result

ID: Coptis25_contig00024881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024881
         (562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633041.1| PREDICTED: homeobox-leucine zipper protein H...   141   4e-61
ref|XP_003633040.1| PREDICTED: homeobox-leucine zipper protein H...   141   4e-61
ref|XP_002281868.2| PREDICTED: homeobox-leucine zipper protein H...   141   4e-61
gb|AAS66760.1| PHAVOLUTA-like HD-ZIPIII protein [Nicotiana sylve...   137   9e-60
ref|XP_002298892.1| predicted protein [Populus trichocarpa] gi|6...   137   1e-59

>ref|XP_003633041.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 3
           [Vitis vinifera]
          Length = 862

 Score =  141 bits (356), Expect(2) = 4e-61
 Identities = 67/82 (81%), Positives = 72/82 (87%)
 Frame = +2

Query: 2   CGLVNLEPMRVARILKDRISWFRDCRCLDVLAAHPTRNDGIIELIYMQTYAPTTMVSARD 181
           CGLV+LEP +VA ILKDR SWFRDCRCLDVL+  PT N G IELIYMQTYAPTT+ SARD
Sbjct: 215 CGLVSLEPTKVAEILKDRPSWFRDCRCLDVLSVIPTGNGGTIELIYMQTYAPTTLASARD 274

Query: 182 FWMLRYTTSLEDGSVVICERSL 247
           FW LRYTTSLEDGS+VICERSL
Sbjct: 275 FWTLRYTTSLEDGSLVICERSL 296



 Score =  119 bits (297), Expect(2) = 4e-61
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = +3

Query: 351 FVRAEMLPSGYLIRPCEGSSSIIHIVDHVDLDARNTPEVLRPLYESPQILAQRSTIAALR 530
           ++RAEMLPSGYLIRPCEG  SIIHIVDHVDLDA + PEVLRPLYES +ILAQ++T+AALR
Sbjct: 311 YIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKTTVAALR 370

Query: 531 HIRQIAQEMS 560
           HIRQIAQE S
Sbjct: 371 HIRQIAQETS 380


>ref|XP_003633040.1| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 2
           [Vitis vinifera]
          Length = 859

 Score =  141 bits (356), Expect(2) = 4e-61
 Identities = 67/82 (81%), Positives = 72/82 (87%)
 Frame = +2

Query: 2   CGLVNLEPMRVARILKDRISWFRDCRCLDVLAAHPTRNDGIIELIYMQTYAPTTMVSARD 181
           CGLV+LEP +VA ILKDR SWFRDCRCLDVL+  PT N G IELIYMQTYAPTT+ SARD
Sbjct: 215 CGLVSLEPTKVAEILKDRPSWFRDCRCLDVLSVIPTGNGGTIELIYMQTYAPTTLASARD 274

Query: 182 FWMLRYTTSLEDGSVVICERSL 247
           FW LRYTTSLEDGS+VICERSL
Sbjct: 275 FWTLRYTTSLEDGSLVICERSL 296



 Score =  119 bits (297), Expect(2) = 4e-61
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = +3

Query: 351 FVRAEMLPSGYLIRPCEGSSSIIHIVDHVDLDARNTPEVLRPLYESPQILAQRSTIAALR 530
           ++RAEMLPSGYLIRPCEG  SIIHIVDHVDLDA + PEVLRPLYES +ILAQ++T+AALR
Sbjct: 311 YIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKTTVAALR 370

Query: 531 HIRQIAQEMS 560
           HIRQIAQE S
Sbjct: 371 HIRQIAQETS 380


>ref|XP_002281868.2| PREDICTED: homeobox-leucine zipper protein HOX32-like isoform 1
           [Vitis vinifera] gi|147820218|emb|CAN73584.1|
           hypothetical protein VITISV_033098 [Vitis vinifera]
           gi|297740817|emb|CBI30999.3| unnamed protein product
           [Vitis vinifera]
          Length = 845

 Score =  141 bits (356), Expect(2) = 4e-61
 Identities = 67/82 (81%), Positives = 72/82 (87%)
 Frame = +2

Query: 2   CGLVNLEPMRVARILKDRISWFRDCRCLDVLAAHPTRNDGIIELIYMQTYAPTTMVSARD 181
           CGLV+LEP +VA ILKDR SWFRDCRCLDVL+  PT N G IELIYMQTYAPTT+ SARD
Sbjct: 215 CGLVSLEPTKVAEILKDRPSWFRDCRCLDVLSVIPTGNGGTIELIYMQTYAPTTLASARD 274

Query: 182 FWMLRYTTSLEDGSVVICERSL 247
           FW LRYTTSLEDGS+VICERSL
Sbjct: 275 FWTLRYTTSLEDGSLVICERSL 296



 Score =  119 bits (297), Expect(2) = 4e-61
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = +3

Query: 351 FVRAEMLPSGYLIRPCEGSSSIIHIVDHVDLDARNTPEVLRPLYESPQILAQRSTIAALR 530
           ++RAEMLPSGYLIRPCEG  SIIHIVDHVDLDA + PEVLRPLYES +ILAQ++T+AALR
Sbjct: 311 YIRAEMLPSGYLIRPCEGGGSIIHIVDHVDLDAWSVPEVLRPLYESSKILAQKTTVAALR 370

Query: 531 HIRQIAQEMS 560
           HIRQIAQE S
Sbjct: 371 HIRQIAQETS 380


>gb|AAS66760.1| PHAVOLUTA-like HD-ZIPIII protein [Nicotiana sylvestris]
          Length = 843

 Score =  137 bits (344), Expect(2) = 9e-60
 Identities = 63/82 (76%), Positives = 72/82 (87%)
 Frame = +2

Query: 2   CGLVNLEPMRVARILKDRISWFRDCRCLDVLAAHPTRNDGIIELIYMQTYAPTTMVSARD 181
           CGLV+LEP +VA ILKDR SW+RDCRCL++L+  PT N G IELIY+QTYAPTT+ SARD
Sbjct: 213 CGLVSLEPTKVAEILKDRPSWYRDCRCLNILSVIPTGNGGTIELIYLQTYAPTTLASARD 272

Query: 182 FWMLRYTTSLEDGSVVICERSL 247
           FW LRYTTSLEDGS+VICERSL
Sbjct: 273 FWTLRYTTSLEDGSLVICERSL 294



 Score =  119 bits (297), Expect(2) = 9e-60
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = +3

Query: 351 FVRAEMLPSGYLIRPCEGSSSIIHIVDHVDLDARNTPEVLRPLYESPQILAQRSTIAALR 530
           FVRAEMLPSGYLIRPCEG  S+IHIVDH+DLDA + PEVLRPLYES +ILAQ++T+AALR
Sbjct: 309 FVRAEMLPSGYLIRPCEGGGSMIHIVDHIDLDAWSVPEVLRPLYESSKILAQKTTVAALR 368

Query: 531 HIRQIAQEMS 560
           HIRQIAQE S
Sbjct: 369 HIRQIAQETS 378


>ref|XP_002298892.1| predicted protein [Populus trichocarpa] gi|60327627|gb|AAX19053.1|
           class III HD-Zip protein 4 [Populus trichocarpa]
           gi|222846150|gb|EEE83697.1| predicted protein [Populus
           trichocarpa]
          Length = 844

 Score =  137 bits (344), Expect(2) = 1e-59
 Identities = 63/82 (76%), Positives = 72/82 (87%)
 Frame = +2

Query: 2   CGLVNLEPMRVARILKDRISWFRDCRCLDVLAAHPTRNDGIIELIYMQTYAPTTMVSARD 181
           CGLV+LEP +VA ILKDR SWFRDCRCLD+L+  PT + G IELIYMQTYAPTT+ +ARD
Sbjct: 214 CGLVSLEPTKVAEILKDRPSWFRDCRCLDILSVIPTGSGGTIELIYMQTYAPTTLAAARD 273

Query: 182 FWMLRYTTSLEDGSVVICERSL 247
           FW LRYTT+LEDGS+VICERSL
Sbjct: 274 FWTLRYTTTLEDGSLVICERSL 295



 Score =  118 bits (296), Expect(2) = 1e-59
 Identities = 58/70 (82%), Positives = 63/70 (90%)
 Frame = +3

Query: 351 FVRAEMLPSGYLIRPCEGSSSIIHIVDHVDLDARNTPEVLRPLYESPQILAQRSTIAALR 530
           F+RAEMLPSGYLIRPCEGS SIIHIVDHVDLD  + PEVLRPLYES +ILAQ+ T+AALR
Sbjct: 310 FIRAEMLPSGYLIRPCEGSGSIIHIVDHVDLDVWSVPEVLRPLYESSKILAQKMTMAALR 369

Query: 531 HIRQIAQEMS 560
           HIRQIAQE S
Sbjct: 370 HIRQIAQETS 379


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