BLASTX nr result

ID: Coptis25_contig00024873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024873
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280171.2| PREDICTED: uncharacterized protein LOC100259...    82   6e-14
emb|CBI19844.3| unnamed protein product [Vitis vinifera]               82   6e-14
emb|CAN79665.1| hypothetical protein VITISV_038207 [Vitis vinifera]    79   5e-13
ref|XP_003634385.1| PREDICTED: uncharacterized protein LOC100854...    75   7e-12
ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD...    71   8e-11

>ref|XP_002280171.2| PREDICTED: uncharacterized protein LOC100259109 [Vitis vinifera]
          Length = 561

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/85 (44%), Positives = 52/85 (61%)
 Frame = -1

Query: 259 VLRNRYDNVKSQLLQGSFGGDESRHIFVTGAEVWDNFIEDYPMGEPTRSKDSPIYDQLCK 80
           VLR  Y+N+ S L Q  F  DES+H+ +   + W+N I+ YP  E  R+K+ PI+ QLC 
Sbjct: 339 VLRRWYNNINSLLYQAGFSWDESKHMVMADGKTWENHIKAYPECETIRNKECPIFKQLCL 398

Query: 79  IFSESGGIGRYAQSSHYIEVDKETI 5
           +FS S   GRY QS H  E+D E +
Sbjct: 399 LFSGSEAEGRYVQSGHDFELDHEIV 423



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/75 (44%), Positives = 43/75 (57%)
 Frame = -1

Query: 259 VLRNRYDNVKSQLLQGSFGGDESRHIFVTGAEVWDNFIEDYPMGEPTRSKDSPIYDQLCK 80
           VLR RY+ VK  L Q  F  D S+ + +    VW  +IE +P  E  R K  PIY+QLC 
Sbjct: 76  VLRKRYNYVKVLLDQNEFSWDVSQCMVIAEDAVWKKYIEAHPEAEAIRKKGCPIYEQLCT 135

Query: 79  IFSESGGIGRYAQSS 35
           IFS+S   G+ A S+
Sbjct: 136 IFSDSEADGKCALSN 150


>emb|CBI19844.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 38/85 (44%), Positives = 52/85 (61%)
 Frame = -1

Query: 259 VLRNRYDNVKSQLLQGSFGGDESRHIFVTGAEVWDNFIEDYPMGEPTRSKDSPIYDQLCK 80
           VLR  Y+N+ S L Q  F  DES+H+ +   + W+N I+ YP  E  R+K+ PI+ QLC 
Sbjct: 195 VLRRWYNNINSLLYQAGFSWDESKHMVMADGKTWENHIKAYPECETIRNKECPIFKQLCL 254

Query: 79  IFSESGGIGRYAQSSHYIEVDKETI 5
           +FS S   GRY QS H  E+D E +
Sbjct: 255 LFSGSEAEGRYVQSGHDFELDHEIV 279


>emb|CAN79665.1| hypothetical protein VITISV_038207 [Vitis vinifera]
          Length = 618

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 37/85 (43%), Positives = 50/85 (58%)
 Frame = -1

Query: 259 VLRNRYDNVKSQLLQGSFGGDESRHIFVTGAEVWDNFIEDYPMGEPTRSKDSPIYDQLCK 80
           VLR  Y+N+ S L Q  F  DES+H+ +   + W+N I+ YP  E  R+K+ PI+ QLC 
Sbjct: 396 VLRRWYNNINSLLYQAGFSWDESKHMVMADGKTWENHIKAYPECETIRNKECPIFKQLCJ 455

Query: 79  IFSESGGIGRYAQSSHYIEVDKETI 5
           +FS     GRY QS H  E D E +
Sbjct: 456 LFSGXEAEGRYVQSGHDFEXDHEIV 480



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/75 (44%), Positives = 43/75 (57%)
 Frame = -1

Query: 259 VLRNRYDNVKSQLLQGSFGGDESRHIFVTGAEVWDNFIEDYPMGEPTRSKDSPIYDQLCK 80
           VLR RY+ VK  L Q  F  D S+ + +    VW  +IE +P  E  R K  PIY+QLC 
Sbjct: 99  VLRKRYNYVKVLLDQNEFSWDVSQCMVIAEDAVWKKYIEAHPEAEAIRKKGCPIYEQLCT 158

Query: 79  IFSESGGIGRYAQSS 35
           IFS+S   G+ A S+
Sbjct: 159 IFSDSEADGKCALSN 173


>ref|XP_003634385.1| PREDICTED: uncharacterized protein LOC100854357 [Vitis vinifera]
          Length = 310

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 40/86 (46%), Positives = 55/86 (63%)
 Frame = -1

Query: 259 VLRNRYDNVKSQLLQGSFGGDESRHIFVTGAEVWDNFIEDYPMGEPTRSKDSPIYDQLCK 80
           VLR RY N+KS   Q  +  D+S  I   G ++W++     P  +  + KD PIYDQLC 
Sbjct: 75  VLRTRYYNLKSAFDQNEYAMDDSCCI---GFDLWEDI---GPRPDTIKIKDCPIYDQLCM 128

Query: 79  IFSESGGIGRYAQSSHYIEVDKETIG 2
           IF+ESG  G+YAQSSHY E+D +++G
Sbjct: 129 IFTESGADGKYAQSSHYEELDDKSVG 154


>ref|XP_002264968.2| PREDICTED: cell cycle checkpoint protein RAD17-like [Vitis vinifera]
          Length = 1013

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 38/79 (48%), Positives = 46/79 (58%)
 Frame = -1

Query: 259  VLRNRYDNVKSQLLQGSFGGDESRHIFVTGAEVWDNFIEDYPMGEPTRSKDSPIYDQLCK 80
            VLR +Y  VKS L Q  F  DE+  I     E WDN+I+++P  E  RS   PIY QLC 
Sbjct: 784  VLRRQYVIVKSLLDQSDFNWDENTGIITAKDEAWDNYIKEHPDAESMRSAGCPIYKQLCT 843

Query: 79   IFSESGGIGRYAQSSHYIE 23
            IFSESG  G   QS+ + E
Sbjct: 844  IFSESGANGTNEQSAEHEE 862


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