BLASTX nr result

ID: Coptis25_contig00024857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024857
         (1582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283891.2| PREDICTED: uncharacterized protein LOC100247...   325   3e-86
ref|XP_002310494.1| predicted protein [Populus trichocarpa] gi|2...   320   5e-85
ref|XP_002514025.1| conserved hypothetical protein [Ricinus comm...   317   4e-84
ref|XP_003615269.1| hypothetical protein MTR_5g065970 [Medicago ...   308   2e-81
ref|XP_002273743.2| PREDICTED: uncharacterized protein LOC100249...   300   5e-79

>ref|XP_002283891.2| PREDICTED: uncharacterized protein LOC100247170 [Vitis vinifera]
            gi|147776518|emb|CAN74009.1| hypothetical protein
            VITISV_003546 [Vitis vinifera]
          Length = 403

 Score =  325 bits (832), Expect = 3e-86
 Identities = 190/387 (49%), Positives = 253/387 (65%), Gaps = 12/387 (3%)
 Frame = -3

Query: 1130 ENQLVIT-IPNSRV-MKVIARSILLALIIVTFPFIESFIQDSRDRSLVVENGLSFNPIDS 957
            + QL++T  P+S + +KV+ RS+L++L+I++ P   S +            G S +  DS
Sbjct: 28   DTQLLVTRFPDSGLFLKVVGRSLLISLVILSIPLFGSIL-----------GGSSPSEPDS 76

Query: 956  V---LLPLIFQDLIHEGLFKLGDKALFVSSGFYNLNDYENRNILIDNGIDLVSEADQERL 786
                LLP++F DL++EGL K+GDK+LFVS G  +   YE+R ++ DN +DL+S +D ER 
Sbjct: 77   TNVELLPVLFHDLMNEGLLKMGDKSLFVS-GASDQAAYESR-VISDNKMDLISVSDFERQ 134

Query: 785  SSIPDGSFDFVISSALHASE-FVDRSLKIGGIALVQLNTDPSNAFEKPSNYKIVYVRKFD 609
            SSIP+ + DF       A+  F+DR+LKIGGIA+VQL+ D S AF+KPSNY+IVY+R+FD
Sbjct: 135  SSIPEATVDFAFVHDFSATATFIDRTLKIGGIAVVQLSNDASVAFDKPSNYRIVYLRRFD 194

Query: 608  STIVALRKISDYE-KSPAKRRLCSFQSEAKMAALDGLEDVILEPPRGSSSVFKKYSRKTK 432
            ST+VA+RK    +  S  +RRLC   SEAK AAL  LEDV+LEPPR +S     Y ++TK
Sbjct: 195  STVVAMRKTDHTQTNSRTQRRLCGLSSEAKKAALKNLEDVLLEPPRAASRKSSSYLKRTK 254

Query: 431  YLPELTGDSLDGYSRRVFIDVTLPGKSEG-SIEWFKKNYPTRNRVFDIFNIEMVPEES-- 261
            YLP+LTGDSL+ Y RRVFI V  P   EG ++ WF  +YPTRNR F+++ IE   EES  
Sbjct: 255  YLPDLTGDSLESYPRRVFIHVGPPETDEGKNVRWFASHYPTRNRDFEMYKIETTTEESKG 314

Query: 260  -TMPQIGVSDWLRKNXXXXXXXXXXXXXXXXXXMISSKAICLVDELFLECKHQWQRGKK- 87
                ++G+S+WLRKN                  M+ SKAI LVDELFLECK Q    +K 
Sbjct: 315  KEEAELGMSEWLRKNVKEEEYVVMKAEAEVVEEMVKSKAIGLVDELFLECKPQSLNNRKS 374

Query: 86   NKSRRAYWECLAL*GRLRDEGIAVHHW 6
            N   RAYWECLAL G+LRDEG+AVH W
Sbjct: 375  NTGGRAYWECLALYGQLRDEGVAVHQW 401


>ref|XP_002310494.1| predicted protein [Populus trichocarpa] gi|222853397|gb|EEE90944.1|
            predicted protein [Populus trichocarpa]
          Length = 379

 Score =  320 bits (821), Expect = 5e-85
 Identities = 174/378 (46%), Positives = 241/378 (63%), Gaps = 6/378 (1%)
 Frame = -3

Query: 1121 LVITIPNSRVMKVIARSILLALIIVTFPFIESFIQDSRDRSLVVENGLSFNPIDSVLLPL 942
            LV+ +P+SRVM+V++RS  LA++++T PF+ S +++    S   + G +   ++S    L
Sbjct: 5    LVLKLPDSRVMRVVSRSFFLAMLVLTLPFVVSILRELDSSSYYDDPGSASFDLES--FDL 62

Query: 941  IFQDLIHEGLFKLGDKALFVSSGFYNLNDYENRNILIDNGIDLVSEADQERLSSIPDGSF 762
            + QDL  EGL K GDKAL V SG   + D      L DN ID VSE+D E+    P+ +F
Sbjct: 63   LLQDLAKEGLIKKGDKALIVCSGVGAVVD--TSRFLNDNDIDFVSESDLEQERLFPNATF 120

Query: 761  DFVISSALHASEFVDRSLKIGGIALVQLNTDPSNAFEKPSNYKIVYVRKFDSTIVALRKI 582
            DF ++  +  + FVDR +K+GGI + QL++DPSNAF+K SNY+ VY+R++DSTIVA+RK 
Sbjct: 121  DFALTLRIGDARFVDRVVKVGGILVTQLSSDPSNAFQKLSNYRAVYLRRYDSTIVAMRKT 180

Query: 581  SDYEK---SPAKRRLCSFQSEAKMAALDGLEDVILEPPRGSSSVFKKYSRKTKYLPELTG 411
            S   +   S AKRR      +AK  AL GLEDV+LEPPR + +  + Y ++ KYLP L G
Sbjct: 181  SLVNQVVVSSAKRRPLQLALDAKKTALQGLEDVLLEPPRKALAKSRVYLKRFKYLPNLLG 240

Query: 410  DSLDGYSRRVFIDVTLPGKSEGSIEWFKKNYPTRNRVFDIFNIEMVPE---ESTMPQIGV 240
            DSL+ YSRRVFI   L  + +G+++WF +NYPTRN+ F+  +I   PE   +       V
Sbjct: 241  DSLEDYSRRVFIHAGLHEEKKGAMQWFNENYPTRNQDFEFHSINTSPEGHSKRVASPADV 300

Query: 239  SDWLRKNXXXXXXXXXXXXXXXXXXMISSKAICLVDELFLECKHQWQRGKKNKSRRAYWE 60
            S+WL KN                  M+  K I LVDELFLEC +QW+ G++ KS+RAYWE
Sbjct: 301  SNWLMKNVREDEFVVMKAEAEVAEEMMKRKTIGLVDELFLECNNQWKNGERKKSKRAYWE 360

Query: 59   CLAL*GRLRDEGIAVHHW 6
            C+AL GRLRDEG+AVH W
Sbjct: 361  CVALYGRLRDEGVAVHQW 378


>ref|XP_002514025.1| conserved hypothetical protein [Ricinus communis]
            gi|223547111|gb|EEF48608.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 422

 Score =  317 bits (813), Expect = 4e-84
 Identities = 185/393 (47%), Positives = 254/393 (64%), Gaps = 18/393 (4%)
 Frame = -3

Query: 1130 ENQLVITIPNSRVMKVIARSILLALIIVTFPFIESFIQDSRDRSLVVENGLSFNPIDSV- 954
            E  LVI +P+SR+++++ARSI+L+LI  T      F   S   SL V    S  P  ++ 
Sbjct: 33   ETYLVIKLPHSRLLRLVARSIVLSLIFFTCTMFSPF---SPGTSLAVSEPESLGPRSNIN 89

Query: 953  --LLPLIFQDLI-HEGLFKLGDKALFVSSGFYNLND----YENRNILI-DNGIDLVSEAD 798
              +LPL+F+DLI +EGL K GDKA+FV++G  N ND    Y +  IL  D  ++ +S +D
Sbjct: 90   LDVLPLLFRDLITNEGLIKTGDKAVFVTNG--NGNDDRAIYSSERILNEDYDMEFISVSD 147

Query: 797  QERLSSIPDGSFDFVISSALHAS-EFVDRSLKIGGIALVQLNTDPSNAFEKPSNYKIVYV 621
             ++   + D SFDF ++ + HA+ EF+DR+LK+GGIA+VQL  +PS  F KP NYKIVY+
Sbjct: 148  LDQQQKVNDASFDFALTYSFHAAQEFIDRTLKVGGIAIVQLGDNPSFLFNKPMNYKIVYL 207

Query: 620  RKFDSTIVALRKISDYEKS-PAKRRLCSFQSEAKMAALDGLEDVILEPPRGSSSVFKKYS 444
            R+F  T +A++K      +   +R+L S+++EA+ A L+ LEDV+LEPPR +S   + Y 
Sbjct: 208  RRFQWTFMAMKKTGYGNTNLSTQRKLLSYRTEARKAVLNNLEDVLLEPPRAASGKSRTYL 267

Query: 443  RKTKYLPELTGDSLDGYSRRVFIDVTLPGKSEGS-IEWFKKNYPTRNRVFDIFNIEMVPE 267
            ++TKYLP+L GDSL+ Y RRVFIDV LP +  GS I WF K+YPTRN  F+++ IE V E
Sbjct: 268  KRTKYLPDLMGDSLESYPRRVFIDVGLPERERGSGIGWFAKHYPTRNLDFEMYKIETVTE 327

Query: 266  EST------MPQIGVSDWLRKNXXXXXXXXXXXXXXXXXXMISSKAICLVDELFLECKHQ 105
             S+      + +IG+S WL KN                  MI S++I LVDELF++CK +
Sbjct: 328  VSSGKEVPQVEEIGMSGWLSKNVKEEEYVVMKAEAEVVEEMIESRSIRLVDELFMDCKPR 387

Query: 104  WQRGKKNKSRRAYWECLAL*GRLRDEGIAVHHW 6
               GK N SRRAYWECLAL GRLRDEGIAVH W
Sbjct: 388  GHGGKGNGSRRAYWECLALYGRLRDEGIAVHQW 420


>ref|XP_003615269.1| hypothetical protein MTR_5g065970 [Medicago truncatula]
            gi|355516604|gb|AES98227.1| hypothetical protein
            MTR_5g065970 [Medicago truncatula]
          Length = 478

 Score =  308 bits (790), Expect = 2e-81
 Identities = 200/472 (42%), Positives = 264/472 (55%), Gaps = 16/472 (3%)
 Frame = -3

Query: 1373 MEAQRMKELLLLWSRIRTTRVALVGGNHTASRFCTR*KFTNQSPFDXXXXXXXXXLNQRP 1194
            ME QRMKELL L    ++ RVALVGGNHTA+RFC+         F           N+  
Sbjct: 1    MEIQRMKELLSLLLAFKSNRVALVGGNHTAARFCS-------PAFSFGPKGYISNKNKH- 52

Query: 1193 XXXXXXXXXXXXKYTPRSVMYENQLVITIPNSRVMKVIARSILLALIIVTFPFIESF--- 1023
                         + P++      L+I  P S   K+  R +LLAL + +FP I S    
Sbjct: 53   --------VSALAFNPKAYY----LIIRFPYSGTWKIFYRLVLLALFVASFPLISSSFVS 100

Query: 1022 ----IQDSRDRSLVVE----NGLSFNPIDSVLLPLIFQDLIHEGLFKLGDKALFVSSGFY 867
                + DS     ++     NG  F  +D  LL L+F DL +EGL K  +K   V  G  
Sbjct: 101  RNPSLDDSASNMKILPQQQLNG--FVNMDQ-LLTLLFNDLTNEGLVKKSNKHRAVFLGDQ 157

Query: 866  NLNDYENRNILIDN-GIDLVSEADQERLSSIPDGSFDFVISSALHAS-EFVDRSLKIGGI 693
             L         ID   +D +S  D E+ SSI DG+ DFV +S   AS +F+DR+LK  GI
Sbjct: 158  ELEGVHQFQSFIDQYNMDYISLNDMEKQSSILDGTVDFVFTSNFPASSQFIDRTLKTNGI 217

Query: 692  ALVQLNTDPSNAFEKPSNYKIVYVRKFDSTIVALRKISDYE-KSPAKRRLCSFQSEAKMA 516
            A V +    + AF KPSNYK+ Y+R+F   ++A++K +    K  ++R+L  + +EAK A
Sbjct: 218  AAVVILN--AAAFHKPSNYKVAYMRRFQKVVMAMKKTTTSPVKLGSQRKLLGYATEAKRA 275

Query: 515  ALDGLEDVILEPPRGSSSVFKKYSRKTKYLPELTGDSLDGYSRRVFIDVTLPGKSEGS-I 339
            AL  LEDV+LEPPR +S   + Y ++TKYLP+L GD+L+ Y RRVFIDV LP K  GS  
Sbjct: 276  ALQKLEDVLLEPPRAASGKSRVYLKRTKYLPDLMGDTLESYPRRVFIDVGLPQKDGGSGT 335

Query: 338  EWFKKNYPTRNRVFDIFNIEMVPEESTMPQIGVSDWLRKNXXXXXXXXXXXXXXXXXXMI 159
            +WF KNYPTRN+ F+++ IE V E S   Q+ +SDWL KN                  M+
Sbjct: 336  DWFSKNYPTRNKNFEMYKIETVVEGSPTTQVEMSDWLMKNVKDEEYVVMKAEAEVVEEMM 395

Query: 158  SSKAICLVDELFLECKHQWQRGKK-NKSRRAYWECLAL*GRLRDEGIAVHHW 6
             SK+I LVDELFLECK Q    K+  + RRAYWECLAL G+LRDEG+AVH W
Sbjct: 396  RSKSIMLVDELFLECKPQGLNLKRGTRGRRAYWECLALYGKLRDEGVAVHQW 447


>ref|XP_002273743.2| PREDICTED: uncharacterized protein LOC100249012 [Vitis vinifera]
          Length = 426

 Score =  300 bits (769), Expect = 5e-79
 Identities = 172/403 (42%), Positives = 244/403 (60%), Gaps = 28/403 (6%)
 Frame = -3

Query: 1130 ENQLVITIPNSRVMKVIARSILLALIIVTFPFIESFIQDSRDRSLVVENGLSFNPIDSV- 954
            +N LVI +P+SRV++V++RS+ LA+++V+ P I  FI      S +  +  S N  DS+ 
Sbjct: 29   DNLLVIKLPDSRVLRVVSRSLFLAMVVVSLPCI-GFIFRGPSASYIEASEFS-NEADSIE 86

Query: 953  --LLPLIFQDLIHEGLFKLGDKALFVSSGF----YNLNDYE-----------NRNILIDN 825
               LPL+FQDL+HEGL + G +AL +SSG     YNL  +            N  +  DN
Sbjct: 87   FESLPLLFQDLVHEGLIREGHRALILSSGIGDPVYNLRFFNILSSGFGDPVYNLGLFNDN 146

Query: 824  GIDLVSEADQERLSSIPDGSFDFVISSALHASEFVDRSLKIGGIALVQLNTDPSNAFEKP 645
             I++V E+D E    IPD  FD V +S+  A + VD  +K GGI  +QL    S  F++ 
Sbjct: 147  EIEIVPESDLEHSGFIPDEKFDIVFASSFRAIKLVDPLIKTGGILALQL----SETFKEI 202

Query: 644  SNYKIVYVRKFDSTIVALRKISDYEK---SPAKRRLCSFQSEAKMAALDGLEDVILEPPR 474
             NY+IVYVR+F+ST+VA+RK  +  +   S  KR LC+  S+AK AAL GLE  +LE PR
Sbjct: 203  PNYRIVYVRRFNSTVVAVRKTVEGNEELNSSTKRGLCAMPSQAKKAALKGLESALLESPR 262

Query: 473  GSSSVFKKYSRKTKYLPELTGDSLDGYSRRVFIDVTLPGKSEGSIEWFKKNYPTRNRVFD 294
             +    ++Y ++TK+LP+L GDSL+GY +R+FI+V     S  +++WF +NYP RN+ F 
Sbjct: 263  HALKQSRQYLKRTKFLPDLLGDSLEGYPQRIFINVGFKEDSSATMDWFHQNYPKRNQDFV 322

Query: 293  IFNIE-------MVPEESTMPQIGVSDWLRKNXXXXXXXXXXXXXXXXXXMISSKAICLV 135
            I+N+E       ++P+      +G+S WL +N                  MI  + +CLV
Sbjct: 323  IYNLEIDCQPGSLMPQMGKATNVGISGWLMENVKEEEYVVMKAEAEVVEEMIKGRTVCLV 382

Query: 134  DELFLECKHQWQRGKKNKSRRAYWECLAL*GRLRDEGIAVHHW 6
            DELFL C HQ Q+G+ NK +RAYWECLAL GRLRDEG+AVH W
Sbjct: 383  DELFLGCNHQRQKGENNK-QRAYWECLALYGRLRDEGVAVHQW 424


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