BLASTX nr result

ID: Coptis25_contig00024846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024846
         (1341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]   172   2e-40
emb|CBI19030.3| unnamed protein product [Vitis vinifera]              158   3e-36
ref|XP_002302240.1| predicted protein [Populus trichocarpa] gi|2...   157   5e-36
ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784...   142   2e-31
ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784...   141   3e-31

>emb|CAN67425.1| hypothetical protein VITISV_006652 [Vitis vinifera]
          Length = 1170

 Score =  172 bits (436), Expect = 2e-40
 Identities = 108/299 (36%), Positives = 152/299 (50%), Gaps = 49/299 (16%)
 Frame = +1

Query: 583  SPRKVPTPSKLKGPHCRRIMTDFNTKDVDIQSEHATEQMIDLRLEEKIAAEENARLFAGR 762
            +P K  T + LK P  R+I TD       +QSE AT+ + DLRLE K+ AEEN+R+FAGR
Sbjct: 14   TPIKNVTINGLKRPCTRQISTD------SVQSEPATQPIPDLRLEAKMTAEENSRMFAGR 67

Query: 763  QTHPFFSSWKVGKKTLGTSEATELESKQCSILRDGQSVSYHTVHVFEMPQDDPVPLDWSN 942
            Q HPFFSSWKVGK+    +E T+ E+  C I +  + +++  +HVFE  QDD V +DW N
Sbjct: 68   QLHPFFSSWKVGKRC---NETTDPENMGCLIEKKDKGITFGPIHVFERIQDDDVSVDWKN 124

Query: 943  WKFSEQSSFDSSCNLENYCSSSFNGSVNPLKFDDFRTNQTTVGASFPQNETFLKH----- 1107
            W F E+S   +SC  E+  SS F GS   L FD+F     ++GAS+ Q+E  L       
Sbjct: 125  WIFCERSIVKASCAPESASSSVFEGSAESLDFDNFLNVPHSIGASYFQSEESLDQRPIQL 184

Query: 1108 --------------------------------------------CSSGMYSKSPTFAFVD 1155
                                                        C   + +  P+    +
Sbjct: 185  NLHEISTPCSTMSANEQVPYHQLSKNMEGNQEGNHIGFFTGDSGCGRNIDAMPPSRLLQE 244

Query: 1156 GIMSHHLPTKASEHGHENSLWTSKYQPTKASEVCGNYESVRRVNEWLGSWRERYFRNPK 1332
             +M ++L      +  E+SLW +KYQP KA EVCGN ESV+ ++EWL  W E+  ++ K
Sbjct: 245  SMMPYYL---GCGNQPEDSLWINKYQPEKAIEVCGNGESVKLLSEWLHLWHEKDSQSSK 300


>emb|CBI19030.3| unnamed protein product [Vitis vinifera]
          Length = 394

 Score =  158 bits (399), Expect = 3e-36
 Identities = 119/338 (35%), Positives = 168/338 (49%), Gaps = 11/338 (3%)
 Frame = +1

Query: 121  MEELTEAEKTGIMQAKNGNLLDSEIQTPRRRFDQSTLYPHGSQEKGEVKYNIKEED---- 288
            M+   E EK  +++   G+L   E++T RRR  Q TL+PH SQ   E     +E+D    
Sbjct: 1    MDCSAEQEKP-VVEDNGGDLGSPELRTVRRRLIQKTLFPHRSQGAEEHIDGREEKDCGAD 59

Query: 289  ------EEYCXXXXXXXXXXXXXXXXXXXXXXXDSINGQ-VALNGSTQTITNENRLQHNE 447
                  EEYC                         I    +   GS   +   +R     
Sbjct: 60   EEEDQTEEYCGSQGKKKKRPKRKAMSRPRASKKYFILIYFLFFVGSDFFVKVSSR---RL 116

Query: 448  QKDQEGADSPNGNEKTCIELESGHCKRTYRKKGQRDASPRKVSTPSPRKVPTPSKLKGPH 627
            QK ++  +S  GN+ TC    S H      ++  +  +       +P K  T + LK P 
Sbjct: 117  QKKKQCINSDEGNDDTCSP--SKHVPNMRSRQWLKWQA-----NTTPIKNVTINGLKRPC 169

Query: 628  CRRIMTDFNTKDVDIQSEHATEQMIDLRLEEKIAAEENARLFAGRQTHPFFSSWKVGKKT 807
             R+I TD       +QSE AT+ + DLRLE K+ AEEN+R+FAGRQ HPFFSSWKVGK+ 
Sbjct: 170  TRQISTD------SVQSEPATQPIPDLRLEAKMTAEENSRMFAGRQLHPFFSSWKVGKRC 223

Query: 808  LGTSEATELESKQCSILRDGQSVSYHTVHVFEMPQDDPVPLDWSNWKFSEQSSFDSSCNL 987
               +E T+ E+  C I +  +S+++  +HVFE  QDD V +DW NW F E+S   +SC  
Sbjct: 224  ---NETTDPENMGCLIEKKNKSITFGPIHVFERIQDDDVSVDWKNWIFCERSIVKASCAP 280

Query: 988  ENYCSSSFNGSVNPLKFDDFRTNQTTVGASFPQNETFL 1101
            E+  SS F GS   L FD+F     ++GAS+ Q+E  L
Sbjct: 281  ESASSSVFEGSAESLDFDNFLNVPHSIGASYFQSEESL 318


>ref|XP_002302240.1| predicted protein [Populus trichocarpa] gi|222843966|gb|EEE81513.1|
            predicted protein [Populus trichocarpa]
          Length = 1068

 Score =  157 bits (398), Expect = 5e-36
 Identities = 129/420 (30%), Positives = 181/420 (43%), Gaps = 47/420 (11%)
 Frame = +1

Query: 196  QTPRRRFDQSTLYPHGSQEKGEVKYNIKEEDEEYCXXXXXXXXXXXXXXXXXXXXXXXDS 375
            Q  RRR  QSTL+PH S E   ++ N ++  +E C                         
Sbjct: 25   QGVRRRLVQSTLFPHKSPE---IEMNSEKNIDENCNGEEYRGSQNKKKRMQKGKTTPLTR 81

Query: 376  INGQVALNGSTQTITNENRLQHNEQKDQEGADSPNGNEKTCIELESGHCKRT-YRKKGQR 552
               +  L G T++   + R +    +D +G       E  C E      KRT   K   +
Sbjct: 82   TAKKHKLPG-TESNCYQKREKECNVEDGKG-------EGECEECCGSQKKRTRIGKATPQ 133

Query: 553  DASPRKVSTPSPRKVPTPSKLKGPHCRRIMTDFNTKDVD--IQSEHATEQMIDLRLEEKI 726
              +P+K    SP    TP K          TD N K +   ++++  +  + +LRLE K+
Sbjct: 134  SRTPKKSKEKSPMN-GTPKKNG--------TD-NGKGISNLVENQGVSSPIPNLRLEAKM 183

Query: 727  AAEENARLFAGRQTHPFFSSWKVGKKTLGTSEATELESKQCSILRDGQSVSYHTVHVFEM 906
            AAEEN+R+FAGRQ HPFFSSWKV K+     E   +ES      R  + ++   +HVFE 
Sbjct: 184  AAEENSRMFAGRQIHPFFSSWKVSKRC---DETNAVESNHHLTRRKAKGINIGPIHVFER 240

Query: 907  PQDDPVPLDWSNWKFSEQSSFDSSCNLENYCSSSFNGSVNPLKFDDFRTNQTTVGASFPQ 1086
             QDD  PLDWS+W   E+   DSS +LE+  SS+F G +  L  +DF ++    G S P+
Sbjct: 241  GQDDARPLDWSDWIVCEKPFIDSSFSLESSFSSNFEGFIGLLDINDFPSSSHPPGTSLPR 300

Query: 1087 NETFLKHC-------------------------------------------SSGMYSKSP 1137
            +   L  C                                            S    KS 
Sbjct: 301  DNASLDQCLCKQEFVCEAPAIVSSRSSDVQLGCCQLAEDAETDCEAVEVHIISASARKSD 360

Query: 1138 TFAFVDGIMSHHLPTKASEHGH-ENSLWTSKYQPTKASEVCGNYESVRRVNEWLGSWRER 1314
                 D +    +P   S     EN LWT KYQP  A+EVCGN ESV+ ++ WL SW++R
Sbjct: 361  AKQLSDLLQERTVPLYISRTKQIENRLWTDKYQPKNATEVCGNDESVKLLSNWLHSWQQR 420


>ref|XP_003522579.1| PREDICTED: uncharacterized protein LOC100784209 [Glycine max]
          Length = 1199

 Score =  142 bits (358), Expect = 2e-31
 Identities = 104/346 (30%), Positives = 154/346 (44%), Gaps = 47/346 (13%)
 Frame = +1

Query: 445  EQKDQEGADSPNGNEKTCIELESGHCKRTYRKKGQRDASPRKVSTPSPRKVPTPSKLKGP 624
            +++D++ +DS N  ++     +    K T RKK  ++A+P+K        V      KG 
Sbjct: 48   DERDEDYSDSENHKKR-----KKPKAKTTPRKKASKNATPKK-------NVSANGTNKGS 95

Query: 625  HCRRIMTDFNTKDVDIQSEHATEQMIDLRLEEKIAAEENARLFAGRQTHPFFSSWKVGKK 804
              R+++ D         S+     + DL LE K+AAEE++R+F GRQ HPFFS WK GKK
Sbjct: 96   TSRQVLAD---------SDRVIAPVHDLFLEAKLAAEEDSRIFTGRQIHPFFSLWKAGKK 146

Query: 805  TLGTSEATELESKQCSILRDGQSVSYHTVHVFEMPQDDPVPLDWSNWKFSEQSSFDSSCN 984
                 +  +  S   +   + +  +   +HVFE  QDD   LDW NW F E ++   +  
Sbjct: 147  ---VQDVADSGSNLSTTKSEDERTTCGPIHVFENTQDDTSSLDWRNWTFLENTT-SMNYG 202

Query: 985  LENYCSSSFNGSVNPLKFDDFRTNQTTVGASFPQN------------------------- 1089
             E+  SS    SV  L FD  R++    G S  QN                         
Sbjct: 203  SESLNSSVLEASVESLNFDKLRSSLYPSGTSISQNSLSSDRLCIHPENLEELSPSNSASL 262

Query: 1090 -------------------ETFLKHCSSGMYSKS---PTFAFVDGIMSHHLPTKASEHGH 1203
                               E+      +G++ KS   P   F+   M  +  +   +   
Sbjct: 263  AKQTCPPTCEDAKLDLEVDESATTTVQAGIFRKSDTEPPIRFLQESMRSYYCSCVDK--A 320

Query: 1204 ENSLWTSKYQPTKASEVCGNYESVRRVNEWLGSWRERYFRNPKMLS 1341
            ENSLWT KY+PTKA EVCGN ESV  + +WL  W ER +++ K +S
Sbjct: 321  ENSLWTYKYKPTKAVEVCGNDESVNFLRDWLHLWHERRYKSRKDIS 366


>ref|XP_003527935.1| PREDICTED: uncharacterized protein LOC100784968 [Glycine max]
          Length = 1197

 Score =  141 bits (356), Expect = 3e-31
 Identities = 108/351 (30%), Positives = 161/351 (45%), Gaps = 48/351 (13%)
 Frame = +1

Query: 433  LQHNEQKDQEGAD-SPNGNEKTCIELESGHCKRTYRKKGQRDASPRKVSTPSPRKVPTPS 609
            ++ N+++D+   D S   N K   + +    K T RKK  ++A+P+K ++ +        
Sbjct: 40   VEKNDKEDERHEDYSDAENHK---KRKKPKAKTTPRKKASKNATPKKNASANGTN----- 91

Query: 610  KLKGPHCRRIMTDFNTKDVDIQSEHATEQMIDLRLEEKIAAEENARLFAGRQTHPFFSSW 789
              KG   R+++ D++  +    +EH      DL LE K+AAEE++R+FAGRQ HPFFS W
Sbjct: 92   --KGSTSRQVLADYDPVNA---TEH------DLFLEAKLAAEEDSRIFAGRQIHPFFSLW 140

Query: 790  KVGKKTLGTSEATELESKQCSILRDGQSVSYHTVHVFEMPQDDPVPLDWSNWKFSEQSSF 969
            K GKK     +  +  S   +   + +  +   +HVFE  QDD   LDW NW F E ++ 
Sbjct: 141  KAGKK---VQDMADSGSNLSTTKSEEERTTCGPIHVFENTQDDTPSLDWRNWAFLENTT- 196

Query: 970  DSSCNLENYCSSSFNGSVNPLKFDDFRTNQTTVGASFPQN-------------------- 1089
              +   E   SS   GSV  L FD  R++    G S  QN                    
Sbjct: 197  TMNYGPEILNSSVLEGSVESLNFDKLRSSLDPSGVSISQNALSSDRLCIHPENLEEVSPS 256

Query: 1090 ------------------------ETFLKHCSSGMYSKS---PTFAFVDGIMSHHLPTKA 1188
                                    E+      +G++ KS   P   F+   M  +   ++
Sbjct: 257  DSASLAEKTCPPTCEDAKQDLEVDESVTTTVQAGIFRKSDTEPPSRFLQESMRSYY--RS 314

Query: 1189 SEHGHENSLWTSKYQPTKASEVCGNYESVRRVNEWLGSWRERYFRNPKMLS 1341
                 ENSLWT KY+PTKA EVCGN ESV  + +WL  W ER +++ K +S
Sbjct: 315  CVDKAENSLWTYKYKPTKAVEVCGNDESVNFLRDWLHLWHERRYKSRKDIS 365


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