BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024840
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]    68   1e-09
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]    67   1e-09
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    57   2e-06
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    56   3e-06
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    55   6e-06

>emb|CAN82650.1| hypothetical protein VITISV_024771 [Vitis vinifera]
          Length = 320

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 59/173 (34%), Positives = 88/173 (50%), Gaps = 4/173 (2%)
 Frame = -1

Query: 557 VHMNLPSQSTFNTQIHDPTINQTRSRELMVSKVVLTYPKDPSE-DFIAVAIHTVLKKIAI 381
           V ++LP   TF      P +++T   E  ++KVVL+    PS  + + +AIH+  KK+A 
Sbjct: 121 VQIDLPPAITFEDS--PPDLDETPI-EFFLNKVVLSSTPSPSNANCVIMAIHSNYKKLAF 177

Query: 380 ARPGDKTWTTIQNIPC-VMDVIYFKQQLYGICANRKLYILDIKSNPPKASEVHVSFSL-- 210
            +PGDK W T+++      D++Y+K   Y I    K+   DI  +P       + F+L  
Sbjct: 178 CKPGDKRWITLKSEDIQYKDLLYYKDNFYAI-GRSKVVQCDIGDDPRV-----IPFALLP 231

Query: 209 SFGYFLGVGINRYLVEWSGELLQVLQHESPKXXXXXXGIKKFYTDAFHVFKLD 51
             GYF      RYLVE SG LL VL++   K       + ++ T  F VF LD
Sbjct: 232 KMGYFQ----YRYLVESSGCLLYVLRYMDLKDXEDPLKL-RYETTGFKVFDLD 279


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 24/209 (11%)
 Frame = -1

Query: 557 VHMNLPSQSTFNTQIHDPTINQTRSRELMVSKVVLTYPKDPSE-DFIAVAIHTVLKKIAI 381
           V ++LP   TF      P +++T   E  ++KVVL+    PS  + + +AIH+   K+A 
Sbjct: 121 VQIDLPPAITFEDS--PPDLDETPI-EFFLNKVVLSSTPSPSNANCVIMAIHSNYNKLAF 177

Query: 380 ARPGDKTWTTIQNIPC-VMDVIYFKQQLYGICANRKLYILDIKSNPPKASEVHVSFSL-- 210
            +PGDK W T+++      D++Y+K   Y I    K+   DI  +P       + F+L  
Sbjct: 178 CKPGDKRWITLKSEDIQYKDLLYYKDNFYAI-GRSKVVQCDIGDDPRV-----IPFALLP 231

Query: 209 SFGYFLGVGINRYLVEWSGELLQVLQHESPKXXXXXXGIK-------------------- 90
             GYF      RYLVE SG LL VL++   K       ++                    
Sbjct: 232 KMGYFQ----YRYLVESSGCLLYVLRYMDLKDNEDPLKLRYETTGFKVFDLDSDKRKFSY 287

Query: 89  KFYTDAFHVFKLDFAYNIWRLVESLGQHA 3
           ++ T  F V+  DF    W+L++++ + A
Sbjct: 288 RYETTTFKVYNFDFDQKKWKLIKNIKEKA 316


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 47/173 (27%), Positives = 76/173 (43%), Gaps = 6/173 (3%)
 Frame = -1

Query: 503 TINQTRSRELMVSKVVLTYPKDPSEDFIAVAIHTVLKKIAIARPGDKTWTTIQNIPCVM- 327
           T++  + R+  + KVVL+       +F+ +AI      +A  R GDK+W+ ++N      
Sbjct: 154 TVSLRQMRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFCE 213

Query: 326 DVIYFKQQLYGICANRKLYILDIKSNPPKASEVHVSFSLSFGYFLGVGINRYLVEWSGEL 147
           DVI+     Y +    ++ I DI S+ P+ S +              G  +YLV    EL
Sbjct: 214 DVIFVNGMFYAVNKAGQIVICDISSDSPRVSFMETPRQAG-------GDMQYLVNSGDEL 266

Query: 146 LQV-----LQHESPKXXXXXXGIKKFYTDAFHVFKLDFAYNIWRLVESLGQHA 3
           L V     L++E          I  + T  F VF+LD+    W  + +LG  A
Sbjct: 267 LLVTRYLDLEYEFDHPDMEPHLI--YRTIRFEVFRLDWNGPQWLRMSTLGDKA 317


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 44/164 (26%), Positives = 70/164 (42%), Gaps = 2/164 (1%)
 Frame = -1

Query: 488 RSRELMVSKVVLTYPKDPSEDFIAVAIHTVLKKIAIARPGDKTWTTIQNIPC-VMDVIYF 312
           + R+  + K +L+       DFIAV I      +A+ R  D +WT +++      DVI+ 
Sbjct: 156 KMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFH 215

Query: 311 KQQLYGICANRKLYILDIKSNPPKASEVHVSFSLSFGYFLGVGINRYLVEWSGELLQVLQ 132
           +   Y +     + + D+  + P+ S + +     FG     G  +YLVE   ELL V +
Sbjct: 216 RGLFYAVNKYGSIAVCDVSGSSPRVSIIEM--PQQFG-----GDLQYLVESGEELLLVTR 268

Query: 131 HESPKXXXXXXGIKKFY-TDAFHVFKLDFAYNIWRLVESLGQHA 3
           +               Y T  F V +LD     W +V SLG  A
Sbjct: 269 YLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRA 312


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 55.5 bits (132), Expect = 6e-06
 Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 2/164 (1%)
 Frame = -1

Query: 488 RSRELMVSKVVLTYPKDPSEDFIAVAIHTVLKKIAIARPGDKTWTTIQNIPCVM-DVIYF 312
           + R+  + K +L+       DFIAV I      +A+ R  D +WT +++      DVI+ 
Sbjct: 156 KMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFH 215

Query: 311 KQQLYGICANRKLYILDIKSNPPKASEVHVSFSLSFGYFLGVGINRYLVEWSGELLQVLQ 132
           +   Y +     + + D+  + P+ S + +     FG     G  +YLVE   ELL V +
Sbjct: 216 RGLFYAVNKYGSIAVCDVSGSSPRVSIIEM--PQQFG-----GDLQYLVESGEELLLVTR 268

Query: 131 HESPKXXXXXXGIKKFY-TDAFHVFKLDFAYNIWRLVESLGQHA 3
           +               Y T  F V +LD     W +V SLG  A
Sbjct: 269 YLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRA 312