BLASTX nr result

ID: Coptis25_contig00024838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024838
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272787.2| PREDICTED: inactive protein kinase SELMODRAF...    68   7e-10
emb|CAN78896.1| hypothetical protein VITISV_025420 [Vitis vinifera]    68   7e-10
ref|XP_002525575.1| serine-threonine protein kinase, plant-type,...    62   6e-08
ref|XP_003523916.1| PREDICTED: uncharacterized protein LOC100794...    61   1e-07
emb|CAN79236.1| hypothetical protein VITISV_021061 [Vitis vinifera]    59   3e-07

>ref|XP_002272787.2| PREDICTED: inactive protein kinase SELMODRAFT_444075-like [Vitis
           vinifera]
          Length = 714

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
 Frame = -2

Query: 514 VAEKCLTKDTDRRLSMEKVVDILTYITAGDTVCSIVDFSPAHSDSVSSISESQCDEG--- 344
           VAEKCL+KD  +RL ME VVD L YI  G+T  SI  FSP  SDSVS+  ES   +G   
Sbjct: 574 VAEKCLSKDPHKRLPMENVVDALCYIMGGNTCYSIKGFSPGLSDSVSNHPESPESQGECR 633

Query: 343 -NEQDSLFTEVHSLSNSSQRSAMFSSDYSS 257
             E++S  +E   LS++ Q S   S  +++
Sbjct: 634 ATEKESFSSETTRLSSTIQMSGSLSPTWTN 663


>emb|CAN78896.1| hypothetical protein VITISV_025420 [Vitis vinifera]
          Length = 648

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
 Frame = -2

Query: 514 VAEKCLTKDTDRRLSMEKVVDILTYITAGDTVCSIVDFSPAHSDSVSSISESQCDEG--- 344
           VAEKCL+KD  +RL ME VVD L YI  G+T  SI  FSP  SDSVS+  ES   +G   
Sbjct: 508 VAEKCLSKDPHKRLPMENVVDALCYIMGGNTCYSIKGFSPGLSDSVSNHPESPESQGECR 567

Query: 343 -NEQDSLFTEVHSLSNSSQRSAMFSSDYSS 257
             E++S  +E   LS++ Q S   S  +++
Sbjct: 568 ATEKESFSSETTRLSSTIQMSGSLSPTWTN 597


>ref|XP_002525575.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223535154|gb|EEF36834.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 726

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
 Frame = -2

Query: 514 VAEKCLTKDTDRRLSMEKVVDILTYITAGDTVCSIVDFSPAHSDSVSSISESQCDEGNEQ 335
           VAEKCL+KD  +RL+M+KVV  L +I A D  C I D+SPA S+S SS   S     +  
Sbjct: 618 VAEKCLSKDPHKRLTMDKVVYALNHIMASDKACGIKDYSPAQSNSASSTPGSY---DSRD 674

Query: 334 DSLF----TEVHSLSNSSQR 287
           DS F    T + S+S+ S++
Sbjct: 675 DSTFTIGTTSISSISHISEK 694


>ref|XP_003523916.1| PREDICTED: uncharacterized protein LOC100794450 [Glycine max]
          Length = 693

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/77 (48%), Positives = 49/77 (63%), Gaps = 2/77 (2%)
 Frame = -2

Query: 514 VAEKCLTKDTDRRLSMEKVVDILTYITAGDTVCSIV--DFSPAHSDSVSSISESQCDEGN 341
           +AEKCL+++  RRL+M +VVD LT I  G T C I+  D+SPA SDS  S S+S   E  
Sbjct: 554 IAEKCLSREPQRRLNMIQVVDALTDIVEGRT-CDIILRDYSPARSDSTYSASDSDESEDE 612

Query: 340 EQDSLFTEVHSLSNSSQ 290
            Q+ L  E   LS+SS+
Sbjct: 613 MQEPLRFESELLSHSSE 629


>emb|CAN79236.1| hypothetical protein VITISV_021061 [Vitis vinifera]
          Length = 537

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/57 (56%), Positives = 38/57 (66%)
 Frame = -2

Query: 514 VAEKCLTKDTDRRLSMEKVVDILTYITAGDTVCSIVDFSPAHSDSVSSISESQCDEG 344
           VAEKCL+KD  ++L ME VVD L YI  G+T  SI  FSP  SDSVS+  ES   +G
Sbjct: 472 VAEKCLSKDPHKQLPMENVVDALCYIMGGNTCYSIKGFSPGLSDSVSNHPESPESQG 528


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