BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024836
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat...   140   1e-31
ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266...   139   2e-31
emb|CBI35955.3| unnamed protein product [Vitis vinifera]              139   2e-31
emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]   139   2e-31
ref|XP_002527400.1| pentatricopeptide repeat-containing protein,...   135   5e-30

>ref|XP_003547637.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g17630-like [Glycine max]
          Length = 696

 Score =  140 bits (352), Expect = 1e-31
 Identities = 66/114 (57%), Positives = 87/114 (76%)
 Frame = +3

Query: 6   LGFFPDGFSYPLVIRACGSLGSLELCKIVHCRVVVSGFGYNLHVGNEVVGMHGKLGCMEL 185
           LGF PDGF+ PLVIRAC SLGS  LC+IVHC  +  GF  +LHV NE+VGM+GKLG ME 
Sbjct: 126 LGFLPDGFTLPLVIRACSSLGSSYLCRIVHCHALQMGFRNHLHVVNELVGMYGKLGRMED 185

Query: 186 SVKVFDRMPSRTHISWNTVISGFSQNYDCKGAVKIYERMKLEGFEPTLVTWTSL 347
           + ++FD M  R+ +SWNT++SG++ N D  GA ++++RM+LEG +P  VTWTSL
Sbjct: 186 ARQLFDGMFVRSIVSWNTMVSGYALNRDSLGASRVFKRMELEGLQPNSVTWTSL 239


>ref|XP_002279880.2| PREDICTED: uncharacterized protein LOC100266920 [Vitis vinifera]
          Length = 1753

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/114 (56%), Positives = 86/114 (75%)
 Frame = +3

Query: 6    LGFFPDGFSYPLVIRACGSLGSLELCKIVHCRVVVSGFGYNLHVGNEVVGMHGKLGCMEL 185
            LG   DGF++PLVIRAC  +GS +LC+ VH  VV  GF +NLHVGNE++GM+GK+G M+ 
Sbjct: 967  LGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDD 1026

Query: 186  SVKVFDRMPSRTHISWNTVISGFSQNYDCKGAVKIYERMKLEGFEPTLVTWTSL 347
            + KVF+RM  R+ +SWNT++SG++ NYDC GA +++  M   G EP LVTWTSL
Sbjct: 1027 ARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSL 1080



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/102 (31%), Positives = 61/102 (59%)
 Frame = +3

Query: 42   VIRACGSLGSLELCKIVHCRVVVSGFGYNLHVGNEVVGMHGKLGCMELSVKVFDRMPSRT 221
            V+  C  L +L L + +H  VV S    N+ VGN ++ M+ K G  +    VF+++ ++ 
Sbjct: 1255 VLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKD 1314

Query: 222  HISWNTVISGFSQNYDCKGAVKIYERMKLEGFEPTLVTWTSL 347
             ISWNT+++G+  +   + A++ +++M  +GFEP  VT+ ++
Sbjct: 1315 LISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAV 1356


>emb|CBI35955.3| unnamed protein product [Vitis vinifera]
          Length = 708

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/114 (56%), Positives = 86/114 (75%)
 Frame = +3

Query: 6   LGFFPDGFSYPLVIRACGSLGSLELCKIVHCRVVVSGFGYNLHVGNEVVGMHGKLGCMEL 185
           LG   DGF++PLVIRAC  +GS +LC+ VH  VV  GF +NLHVGNE++GM+GK+G M+ 
Sbjct: 129 LGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDD 188

Query: 186 SVKVFDRMPSRTHISWNTVISGFSQNYDCKGAVKIYERMKLEGFEPTLVTWTSL 347
           + KVF+RM  R+ +SWNT++SG++ NYDC GA +++  M   G EP LVTWTSL
Sbjct: 189 ARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSL 242



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/102 (31%), Positives = 61/102 (59%)
 Frame = +3

Query: 42  VIRACGSLGSLELCKIVHCRVVVSGFGYNLHVGNEVVGMHGKLGCMELSVKVFDRMPSRT 221
           V+  C  L +L L + +H  VV S    N+ VGN ++ M+ K G  +    VF+++ ++ 
Sbjct: 417 VLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKD 476

Query: 222 HISWNTVISGFSQNYDCKGAVKIYERMKLEGFEPTLVTWTSL 347
            ISWNT+++G+  +   + A++ +++M  +GFEP  VT+ ++
Sbjct: 477 LISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAV 518


>emb|CAN78640.1| hypothetical protein VITISV_031739 [Vitis vinifera]
          Length = 954

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/114 (56%), Positives = 86/114 (75%)
 Frame = +3

Query: 6   LGFFPDGFSYPLVIRACGSLGSLELCKIVHCRVVVSGFGYNLHVGNEVVGMHGKLGCMEL 185
           LG   DGF++PLVIRAC  +GS +LC+ VH  VV  GF +NLHVGNE++GM+GK+G M+ 
Sbjct: 129 LGVSADGFTFPLVIRACALMGSRKLCRSVHGHVVEMGFQWNLHVGNELMGMYGKIGRMDD 188

Query: 186 SVKVFDRMPSRTHISWNTVISGFSQNYDCKGAVKIYERMKLEGFEPTLVTWTSL 347
           + KVF+RM  R+ +SWNT++SG++ NYDC GA +++  M   G EP LVTWTSL
Sbjct: 189 ARKVFERMAVRSCVSWNTMVSGYALNYDCHGASEMFRMMGSAGLEPNLVTWTSL 242



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 32/102 (31%), Positives = 61/102 (59%)
 Frame = +3

Query: 42  VIRACGSLGSLELCKIVHCRVVVSGFGYNLHVGNEVVGMHGKLGCMELSVKVFDRMPSRT 221
           V+  C  L +L L + +H  VV S    N+ VGN ++ M+ K G  +    VF+++ ++ 
Sbjct: 417 VLSVCAELAALHLGREIHGHVVRSLMDGNILVGNGLINMYTKSGSFKEGNLVFEKIENKD 476

Query: 222 HISWNTVISGFSQNYDCKGAVKIYERMKLEGFEPTLVTWTSL 347
            ISWNT+++G+  +   + A++ +++M  +GFEP  VT+ ++
Sbjct: 477 LISWNTMVAGYGIHGLGENAIRTFDQMIKDGFEPDGVTFVAV 518


>ref|XP_002527400.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223533210|gb|EEF34966.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score =  135 bits (339), Expect = 5e-30
 Identities = 62/114 (54%), Positives = 85/114 (74%)
 Frame = +3

Query: 6   LGFFPDGFSYPLVIRACGSLGSLELCKIVHCRVVVSGFGYNLHVGNEVVGMHGKLGCMEL 185
           +G   DGF++PLVIRAC  +GS  L K +H  V+  GF  +LHVGNE++GM+ KLG M  
Sbjct: 36  IGTLGDGFTFPLVIRACAYMGSFILGKTIHGHVLEMGFQSHLHVGNELIGMYAKLGRMRD 95

Query: 186 SVKVFDRMPSRTHISWNTVISGFSQNYDCKGAVKIYERMKLEGFEPTLVTWTSL 347
           +  +FDRM  R++ISWNT++S ++ NYDC GA++I++RM+ EG EP LVTWTSL
Sbjct: 96  ARHLFDRMSVRSYISWNTMVSAYAFNYDCNGALEIFQRMESEGMEPNLVTWTSL 149



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/102 (30%), Positives = 59/102 (57%)
 Frame = +3

Query: 42  VIRACGSLGSLELCKIVHCRVVVSGFGYNLHVGNEVVGMHGKLGCMELSVKVFDRMPSRT 221
           V+  C  L +L L + +H  VV +    N+ VGN +V M+ K GC++    +F++   + 
Sbjct: 324 VLSLCAELAALHLGREIHGHVVRAVMVNNILVGNGLVNMYAKCGCLKEGHMIFEKTERKD 383

Query: 222 HISWNTVISGFSQNYDCKGAVKIYERMKLEGFEPTLVTWTSL 347
            ISWN++I+G+  +     A++ +++M   GF+P  VT+ ++
Sbjct: 384 LISWNSMITGYGMHGLGMNALETFDQMIKLGFKPDGVTFVAV 425