BLASTX nr result

ID: Coptis25_contig00024830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024830
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
ref|XP_002511462.1| conserved hypothetical protein [Ricinus comm...    95   7e-18
gb|AFK48292.1| unknown [Lotus japonicus]                               95   9e-18
ref|XP_003608927.1| hypothetical protein MTR_4g106500 [Medicago ...    94   1e-17
ref|XP_003525171.1| PREDICTED: uncharacterized protein LOC100813...    94   1e-17

>ref|XP_002322148.1| predicted protein [Populus trichocarpa] gi|222869144|gb|EEF06275.1|
           predicted protein [Populus trichocarpa]
          Length = 82

 Score = 99.4 bits (246), Expect = 4e-19
 Identities = 47/83 (56%), Positives = 59/83 (71%)
 Frame = -3

Query: 384 MEKSNSYGASWADQWDYSNPDPVHTEDPNKKKSGTSNKYGKKVGEGFDKTKAVASTGMKK 205
           M  ++S+  SWADQWDY NPDP   +      S ++ KY +KVGEG  KTK VASTG+KK
Sbjct: 1   MSGNSSHETSWADQWDY-NPDPAVYDHSKDSSSDSTAKYKQKVGEGLGKTKQVASTGIKK 59

Query: 204 VKEGTTLGFNWIKEKYNKRNQKN 136
           VKEGT++GF WIK+KY K  QK+
Sbjct: 60  VKEGTSVGFRWIKDKYQKTTQKH 82


>ref|XP_002511462.1| conserved hypothetical protein [Ricinus communis]
           gi|223550577|gb|EEF52064.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 81

 Score = 95.1 bits (235), Expect = 7e-18
 Identities = 48/80 (60%), Positives = 56/80 (70%), Gaps = 1/80 (1%)
 Frame = -3

Query: 372 NSYGASWADQWDYSNPDPVHTEDPNKKKSGTSN-KYGKKVGEGFDKTKAVASTGMKKVKE 196
           +S   SWADQWD   PDPVH    +K  S +S  KY +KVGEG  KTK VASTG KKVKE
Sbjct: 3   SSNETSWADQWD-DGPDPVHDYQNSKSNSTSSTAKYKQKVGEGLGKTKEVASTGFKKVKE 61

Query: 195 GTTLGFNWIKEKYNKRNQKN 136
           GT  GF+WIK+KY K+ QK+
Sbjct: 62  GTVSGFHWIKDKYQKKTQKH 81


>gb|AFK48292.1| unknown [Lotus japonicus]
          Length = 84

 Score = 94.7 bits (234), Expect = 9e-18
 Identities = 44/80 (55%), Positives = 57/80 (71%), Gaps = 1/80 (1%)
 Frame = -3

Query: 372 NSYGASWADQWDYSNPDPVHTEDPNKKKSG-TSNKYGKKVGEGFDKTKAVASTGMKKVKE 196
           NSYG SWADQWD   PDP+     NK   G  + KY +K+GEG  KTK VAS+G+KK+K+
Sbjct: 6   NSYGTSWADQWD-DGPDPIMVGSNNKSNGGGATTKYKEKLGEGLGKTKTVASSGIKKLKD 64

Query: 195 GTTLGFNWIKEKYNKRNQKN 136
           GT++G +WIK KY+K  QK+
Sbjct: 65  GTSVGIHWIKTKYSKATQKH 84


>ref|XP_003608927.1| hypothetical protein MTR_4g106500 [Medicago truncatula]
           gi|355509982|gb|AES91124.1| hypothetical protein
           MTR_4g106500 [Medicago truncatula]
          Length = 82

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 44/79 (55%), Positives = 57/79 (72%)
 Frame = -3

Query: 372 NSYGASWADQWDYSNPDPVHTEDPNKKKSGTSNKYGKKVGEGFDKTKAVASTGMKKVKEG 193
           NSYG SWADQWD + PDP+  +  N K   ++ KY +K GEG  KTK VASTG+KK+K+G
Sbjct: 8   NSYGTSWADQWD-NGPDPIMADTNNNK---STTKYKEKFGEGLGKTKGVASTGVKKLKDG 63

Query: 192 TTLGFNWIKEKYNKRNQKN 136
           T++G NWIK KY+K   K+
Sbjct: 64  TSVGLNWIKTKYSKATHKH 82


>ref|XP_003525171.1| PREDICTED: uncharacterized protein LOC100813287 [Glycine max]
          Length = 80

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/79 (56%), Positives = 58/79 (73%)
 Frame = -3

Query: 372 NSYGASWADQWDYSNPDPVHTEDPNKKKSGTSNKYGKKVGEGFDKTKAVASTGMKKVKEG 193
           N+Y  SWADQWD   PDPV     NK  +  + KY +K+GEGF KTKAVASTG+KK+K+G
Sbjct: 4   NNYN-SWADQWD-DGPDPVMVGSNNKNSNDNTAKYKQKLGEGFGKTKAVASTGVKKLKDG 61

Query: 192 TTLGFNWIKEKYNKRNQKN 136
           T++G +WIK KY+K  QK+
Sbjct: 62  TSVGLHWIKTKYSKATQKH 80


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