BLASTX nr result

ID: Coptis25_contig00024820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024820
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551620.1| PREDICTED: 4-hydroxybenzoate polyprenyltrans...    53   3e-13
ref|XP_002306388.1| predicted protein [Populus trichocarpa] gi|2...    53   6e-13
ref|XP_004163305.1| PREDICTED: 4-hydroxybenzoate polyprenyltrans...    52   8e-13
ref|XP_004148572.1| PREDICTED: 4-hydroxybenzoate polyprenyltrans...    52   8e-13
ref|XP_002867696.1| ATPPT1 [Arabidopsis lyrata subsp. lyrata] gi...    53   1e-12

>ref|XP_003551620.1| PREDICTED: 4-hydroxybenzoate polyprenyltransferase,
           mitochondrial-like [Glycine max]
          Length = 466

 Score = 53.1 bits (126), Expect(2) = 3e-13
 Identities = 25/27 (92%), Positives = 25/27 (92%)
 Frame = +1

Query: 67  NNYSCVLGASSLLLVFSYPLMKRVTFW 147
           NNYS VLGASSLLLVFSYPLMKR TFW
Sbjct: 213 NNYSRVLGASSLLLVFSYPLMKRFTFW 239



 Score = 46.2 bits (108), Expect(2) = 3e-13
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +3

Query: 135 GDILGWAAVRGSLDPAIVLPLYCSG 209
           G +LGWAA++GSLDP+IVLPLY SG
Sbjct: 251 GALLGWAAIKGSLDPSIVLPLYASG 275


>ref|XP_002306388.1| predicted protein [Populus trichocarpa] gi|222855837|gb|EEE93384.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score = 52.8 bits (125), Expect(2) = 6e-13
 Identities = 24/27 (88%), Positives = 25/27 (92%)
 Frame = +1

Query: 67  NNYSCVLGASSLLLVFSYPLMKRVTFW 147
           NNYS +LGASSLLLVFSYPLMKR TFW
Sbjct: 118 NNYSRILGASSLLLVFSYPLMKRFTFW 144



 Score = 45.8 bits (107), Expect(2) = 6e-13
 Identities = 19/25 (76%), Positives = 23/25 (92%)
 Frame = +3

Query: 135 GDILGWAAVRGSLDPAIVLPLYCSG 209
           G +LGW+AV+GSLDPAIV+PLY SG
Sbjct: 156 GALLGWSAVKGSLDPAIVIPLYASG 180


>ref|XP_004163305.1| PREDICTED: 4-hydroxybenzoate polyprenyltransferase,
           mitochondrial-like [Cucumis sativus]
          Length = 394

 Score = 51.6 bits (122), Expect(2) = 8e-13
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +1

Query: 67  NNYSCVLGASSLLLVFSYPLMKRVTFW 147
           NNYS +LGASSLLLVFSYPLMKR T+W
Sbjct: 218 NNYSRILGASSLLLVFSYPLMKRFTYW 244



 Score = 46.6 bits (109), Expect(2) = 8e-13
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 135 GDILGWAAVRGSLDPAIVLPLYCSG 209
           G +LGWAA+RG+LDPAIVLPLY SG
Sbjct: 256 GALLGWAAIRGTLDPAIVLPLYFSG 280


>ref|XP_004148572.1| PREDICTED: 4-hydroxybenzoate polyprenyltransferase,
           mitochondrial-like [Cucumis sativus]
          Length = 394

 Score = 51.6 bits (122), Expect(2) = 8e-13
 Identities = 23/27 (85%), Positives = 25/27 (92%)
 Frame = +1

Query: 67  NNYSCVLGASSLLLVFSYPLMKRVTFW 147
           NNYS +LGASSLLLVFSYPLMKR T+W
Sbjct: 218 NNYSRILGASSLLLVFSYPLMKRFTYW 244



 Score = 46.6 bits (109), Expect(2) = 8e-13
 Identities = 20/25 (80%), Positives = 23/25 (92%)
 Frame = +3

Query: 135 GDILGWAAVRGSLDPAIVLPLYCSG 209
           G +LGWAA+RG+LDPAIVLPLY SG
Sbjct: 256 GALLGWAAIRGTLDPAIVLPLYFSG 280


>ref|XP_002867696.1| ATPPT1 [Arabidopsis lyrata subsp. lyrata]
           gi|297313532|gb|EFH43955.1| ATPPT1 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 405

 Score = 53.1 bits (126), Expect(2) = 1e-12
 Identities = 25/27 (92%), Positives = 25/27 (92%)
 Frame = +1

Query: 67  NNYSCVLGASSLLLVFSYPLMKRVTFW 147
           NNYS VLGASSLLLVFSYPLMKR TFW
Sbjct: 229 NNYSRVLGASSLLLVFSYPLMKRFTFW 255



 Score = 44.7 bits (104), Expect(2) = 1e-12
 Identities = 18/25 (72%), Positives = 22/25 (88%)
 Frame = +3

Query: 135 GDILGWAAVRGSLDPAIVLPLYCSG 209
           G +LGW AV+GS+DPA+VLPLY SG
Sbjct: 267 GALLGWTAVKGSIDPAVVLPLYLSG 291


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