BLASTX nr result

ID: Coptis25_contig00024809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024809
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270448.2| PREDICTED: transcription factor bHLH25-like ...   149   4e-34
emb|CAN67117.1| hypothetical protein VITISV_026466 [Vitis vinifera]   148   1e-33
ref|XP_002262764.1| PREDICTED: transcription factor bHLH25-like ...   143   4e-32
ref|XP_003635290.1| PREDICTED: transcription factor bHLH25-like,...   142   8e-32
ref|XP_002276304.2| PREDICTED: transcription factor bHLH25-like,...   140   2e-31

>ref|XP_002270448.2| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
          Length = 365

 Score =  149 bits (377), Expect = 4e-34
 Identities = 98/220 (44%), Positives = 127/220 (57%), Gaps = 7/220 (3%)
 Frame = -1

Query: 641 MDMSTVSWLSEMGMEDPTFIHQYQMNSLCDFTPQQLGAAFGEDFHHPYSC---ETFSSHP 471
           MD+S+  W S++GM+D  FI    +NSL +FT Q +  A  ED   P      E++SS+P
Sbjct: 1   MDISSDRWFSDLGMDDYNFIDPCHVNSLDEFTTQHITTALREDLRAPSLSSDHESYSSYP 60

Query: 470 TFNPLINTNTIGHSSSLELEASRTCFERPKKQLKSDSWDSCTTER-ISTPEASSSPNMLS 294
           T NP   + T   SS   +E   T F RP KQLK++SW S T +  I  P  SSS ++LS
Sbjct: 61  TLNPETTSTTFSASS---IEPHYTSFGRPAKQLKTNSWSSDTKQHVIPKPPPSSSSSLLS 117

Query: 293 FGNSNSPE--THHQSYGSSVGAAKPKNEVVXXXXXXXXXXXXXXQGTHVNQNYAQK-YQG 123
           F N+ SP     HQ YG      KPK+EV+              +G++ NQNY  K  QG
Sbjct: 118 FMNNGSPPAVNTHQYYGDC--TMKPKDEVI--SHGNVNFPSQISKGSYENQNYVPKANQG 173

Query: 122 NKRASTPTTKPPSYTQDHILAERRRREKLSQRFIALSAIV 3
            KR  TP  +  S+ QDHI+AER+RREKLSQRFIALSA+V
Sbjct: 174 TKRV-TPMRRTSSHAQDHIMAERKRREKLSQRFIALSALV 212


>emb|CAN67117.1| hypothetical protein VITISV_026466 [Vitis vinifera]
          Length = 365

 Score =  148 bits (373), Expect = 1e-33
 Identities = 97/220 (44%), Positives = 126/220 (57%), Gaps = 7/220 (3%)
 Frame = -1

Query: 641 MDMSTVSWLSEMGMEDPTFIHQYQMNSLCDFTPQQLGAAFGEDFHHPYSC---ETFSSHP 471
           MD+S+  W S++GM+D  FI    +NSL +FT Q +  A  ED   P      E++SS+P
Sbjct: 1   MDISSDRWFSDLGMDDYNFIDPCHVNSLDEFTTQHITTALREDLRAPSLSSDHESYSSYP 60

Query: 470 TFNPLINTNTIGHSSSLELEASRTCFERPKKQLKSDSWDSCTTER-ISTPEASSSPNMLS 294
           T NP   + T   SS   +E     F RP KQLK++SW S T +  I  P  SSS ++LS
Sbjct: 61  TLNPETTSTTFSASS---IETHYASFGRPAKQLKTNSWSSDTKQHVIPKPPPSSSSSLLS 117

Query: 293 FGNSNSPE--THHQSYGSSVGAAKPKNEVVXXXXXXXXXXXXXXQGTHVNQNYAQK-YQG 123
           F N+ SP     HQ YG      KPK+EV+              +G++ NQNY  K  QG
Sbjct: 118 FMNNGSPPAVNTHQYYGDC--TMKPKDEVI--SHGNVNFPSQISKGSYENQNYVPKANQG 173

Query: 122 NKRASTPTTKPPSYTQDHILAERRRREKLSQRFIALSAIV 3
            KR  TP  +  S+ QDHI+AER+RREKLSQRFIALSA+V
Sbjct: 174 TKRV-TPMRRTSSHAQDHIMAERKRREKLSQRFIALSALV 212


>ref|XP_002262764.1| PREDICTED: transcription factor bHLH25-like [Vitis vinifera]
          Length = 358

 Score =  143 bits (360), Expect = 4e-32
 Identities = 92/220 (41%), Positives = 125/220 (56%), Gaps = 7/220 (3%)
 Frame = -1

Query: 641 MDMSTVSWLSEMGMEDPTFIHQYQM----NSLCDFTPQQLGAAFGEDFHHPYSCETFSSH 474
           MD+S+  WL+E  MEDPTFIHQYQM    NSL  F                +S E+ SS+
Sbjct: 1   MDVSSGKWLTEQEMEDPTFIHQYQMPPFDNSLDGFN------------FDSFSSESNSSY 48

Query: 473 PTFNPLINTNTIGHSSSLELEASRTCFERPKKQLKSDSWDSCTTERISTPEASSSP-NML 297
           P+F+P    N  G  S++E   +     RP KQLK++SWDSCT E I++ ++SSS   ++
Sbjct: 49  PSFSPETTPNFCG--STIEYFQAAGVVGRPSKQLKTNSWDSCTAEPITSRKSSSSSVQLI 106

Query: 296 SFGNSNSPETHH--QSYGSSVGAAKPKNEVVXXXXXXXXXXXXXXQGTHVNQNYAQKYQG 123
           SFGNSN P      + +G     AKPKNE                +G++ NQNY+ K   
Sbjct: 107 SFGNSNLPPPTDTLKFHGHQDKKAKPKNEA--SSDRNMKFASLISEGSYENQNYSPKSGD 164

Query: 122 NKRASTPTTKPPSYTQDHILAERRRREKLSQRFIALSAIV 3
             +  + TT+ P    DH++AER+RREKL+QRFIALSA+V
Sbjct: 165 RTKRVSSTTRNPLNNHDHVVAERKRREKLTQRFIALSALV 204


>ref|XP_003635290.1| PREDICTED: transcription factor bHLH25-like, partial [Vitis
           vinifera]
          Length = 233

 Score =  142 bits (357), Expect = 8e-32
 Identities = 93/220 (42%), Positives = 130/220 (59%), Gaps = 7/220 (3%)
 Frame = -1

Query: 641 MDMSTVSWLSEMGMEDPTFIHQYQMNSLCDFTPQQLGAAFGEDFHHPYSCETFSSHPTFN 462
           MD+S+  WL+E+G+EDPTFIHQYQM S  +  P   G  F       +S +++SS+ +F+
Sbjct: 1   MDVSSAKWLTELGIEDPTFIHQYQMQSFGN--PVDHGFNF-----QSFSSDSYSSYLSFS 53

Query: 461 PLINTNTIGHSSSLELEASRTCFERPKKQLKSDSWDSCTTERISTPEASSSPN--MLSFG 288
           P    ++        +E  +T  ER  KQLK++SW+S T+ RI TP+ASSS +  +LSFG
Sbjct: 54  PKTTLSSA-------VENFQTDIERTAKQLKTNSWESSTSNRI-TPKASSSSSSQLLSFG 105

Query: 287 NSNSP-----ETHHQSYGSSVGAAKPKNEVVXXXXXXXXXXXXXXQGTHVNQNYAQKYQG 123
           NSNSP     +  H++   +V   KPK+E                  ++ NQN+     G
Sbjct: 106 NSNSPLPTDVQNFHENLDCTV---KPKDEAASHGNMNFASVISK--SSYGNQNHGH---G 157

Query: 122 NKRASTPTTKPPSYTQDHILAERRRREKLSQRFIALSAIV 3
            KR  TP T+ P   QDH++AER+RREKL+QRFIALSAIV
Sbjct: 158 TKRVGTPITRNPLNNQDHVIAERKRREKLTQRFIALSAIV 197


>ref|XP_002276304.2| PREDICTED: transcription factor bHLH25-like, partial [Vitis
           vinifera]
          Length = 239

 Score =  140 bits (354), Expect = 2e-31
 Identities = 93/220 (42%), Positives = 129/220 (58%), Gaps = 7/220 (3%)
 Frame = -1

Query: 641 MDMSTVSWLSEMGMEDPTFIHQYQMNSLCDFTPQQLGAAFGEDFHHPYSCETFSSHPTFN 462
           MD+S+  WL+E+G+EDPTFIHQYQM S  +  P   G  F       +S +++SS+ +F+
Sbjct: 1   MDVSSAKWLTELGIEDPTFIHQYQMQSFGN--PVDHGFNF-----QSFSSDSYSSYLSFS 53

Query: 461 PLINTNTIGHSSSLELEASRTCFERPKKQLKSDSWDSCTTERISTPEASSSPN--MLSFG 288
           P     T  +  S  +E  +T  ER  KQLK++SW+S T+  I TP+ASSS +  +LSFG
Sbjct: 54  P----KTTPNFCSSAVENFQTDIERTAKQLKTNSWESSTSNHI-TPKASSSSSSQLLSFG 108

Query: 287 NSNSP-----ETHHQSYGSSVGAAKPKNEVVXXXXXXXXXXXXXXQGTHVNQNYAQKYQG 123
           NSNSP     +  H++   +V   KPK+E                  ++ NQN+     G
Sbjct: 109 NSNSPLPTDVQNFHENLDCTV---KPKDEAASHGNMNFASVISK--SSYGNQNHGH---G 160

Query: 122 NKRASTPTTKPPSYTQDHILAERRRREKLSQRFIALSAIV 3
            KR  TP T+ P    DH++AER+RREKL+QRFIALSAIV
Sbjct: 161 TKRVGTPITRNPLNNHDHVIAERKRREKLTQRFIALSAIV 200


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