BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024797
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30170.3| unnamed protein product [Vitis vinifera]               97   1e-18
ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vit...    97   1e-18
ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like...    92   3e-17
gb|ABK24792.1| unknown [Picea sitchensis]                              92   6e-17
gb|ABK24557.1| unknown [Picea sitchensis]                              92   6e-17

>emb|CBI30170.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/60 (78%), Positives = 50/60 (83%), Gaps = 3/60 (5%)
 Frame = +2

Query: 2   YEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLYFKVKPPEA---KPALVANGTEAPG 172
           YEIIAFKVPS EIDKS+ K F+HWDPDSKMFTLQLYFK KPPEA   +PA  ANGT APG
Sbjct: 174 YEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASAANGTTAPG 233


>ref|XP_002266748.1| PREDICTED: splicing factor 3A subunit 2 [Vitis vinifera]
          Length = 357

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/60 (78%), Positives = 50/60 (83%), Gaps = 3/60 (5%)
 Frame = +2

Query: 2   YEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLYFKVKPPEA---KPALVANGTEAPG 172
           YEIIAFKVPS EIDKS+ K F+HWDPDSKMFTLQLYFK KPPEA   +PA  ANGT APG
Sbjct: 174 YEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKTKPPEANKPQPASAANGTTAPG 233


>ref|XP_003543690.1| PREDICTED: splicing factor 3A subunit 2-like [Glycine max]
          Length = 350

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/61 (72%), Positives = 49/61 (80%), Gaps = 3/61 (4%)
 Frame = +2

Query: 2   YEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLYFKVKPPEA---KPALVANGTEAPG 172
           YEI+AFKVPS EIDKS+ K F+HWDPDSKMFTLQLYFK KPPEA   +PA  ANGT   G
Sbjct: 174 YEIVAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPPEANKPQPATTANGTAPSG 233

Query: 173 I 175
           +
Sbjct: 234 V 234


>gb|ABK24792.1| unknown [Picea sitchensis]
          Length = 359

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/60 (75%), Positives = 49/60 (81%), Gaps = 3/60 (5%)
 Frame = +2

Query: 2   YEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLYFKVKPPEAKPA---LVANGTEAPG 172
           YEIIAFKVPSIEIDKS+SK F+HWDPD+KMFTLQLYFKVKP EA        A+GT APG
Sbjct: 174 YEIIAFKVPSIEIDKSTSKFFSHWDPDTKMFTLQLYFKVKPMEANKGAAPATASGTSAPG 233


>gb|ABK24557.1| unknown [Picea sitchensis]
          Length = 308

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/60 (75%), Positives = 49/60 (81%), Gaps = 3/60 (5%)
 Frame = +2

Query: 2   YEIIAFKVPSIEIDKSSSKLFTHWDPDSKMFTLQLYFKVKPPEAKPA---LVANGTEAPG 172
           YEIIAFKVPSIEIDKS+SK F+HWDPD+KMFTLQLYFKVKP EA        A+GT APG
Sbjct: 174 YEIIAFKVPSIEIDKSTSKFFSHWDPDTKMFTLQLYFKVKPMEANKGAAPATASGTSAPG 233