BLASTX nr result

ID: Coptis25_contig00024783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024783
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282657.1| PREDICTED: lon protease homolog 2, peroxisom...   182   3e-44
emb|CAN75012.1| hypothetical protein VITISV_034238 [Vitis vinifera]   182   3e-44
ref|XP_002329591.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_002326492.1| predicted protein [Populus trichocarpa] gi|2...   177   6e-43
sp|O04979.2|LONP2_SPIOL RecName: Full=Lon protease homolog 2, pe...   177   8e-43

>ref|XP_002282657.1| PREDICTED: lon protease homolog 2, peroxisomal [Vitis vinifera]
           gi|297742183|emb|CBI33970.3| unnamed protein product
           [Vitis vinifera]
          Length = 888

 Score =  182 bits (461), Expect = 3e-44
 Identities = 94/103 (91%), Positives = 97/103 (94%), Gaps = 2/103 (1%)
 Frame = -1

Query: 303 TELVDRH*QSFRVAEKITQKVEGQLSKSQKEFLLCQQMRAIKEELGD--DDEDDVAALER 130
           TELVDRH QS RVAEKITQKVEGQLSKSQKEFLL QQMRAIKEELGD  DDEDDVAALER
Sbjct: 249 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALER 308

Query: 129 KMQSAGMPPNVWKHAQRELRRLRKMQPQQPGYSSSHVYLELLA 1
           KMQSAGMPPN+WKHAQRELRRL+KMQPQQPGY+SS VYLELLA
Sbjct: 309 KMQSAGMPPNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELLA 351


>emb|CAN75012.1| hypothetical protein VITISV_034238 [Vitis vinifera]
          Length = 904

 Score =  182 bits (461), Expect = 3e-44
 Identities = 94/103 (91%), Positives = 97/103 (94%), Gaps = 2/103 (1%)
 Frame = -1

Query: 303 TELVDRH*QSFRVAEKITQKVEGQLSKSQKEFLLCQQMRAIKEELGD--DDEDDVAALER 130
           TELVDRH QS RVAEKITQKVEGQLSKSQKEFLL QQMRAIKEELGD  DDEDDVAALER
Sbjct: 265 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALER 324

Query: 129 KMQSAGMPPNVWKHAQRELRRLRKMQPQQPGYSSSHVYLELLA 1
           KMQSAGMPPN+WKHAQRELRRL+KMQPQQPGY+SS VYLELLA
Sbjct: 325 KMQSAGMPPNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELLA 367


>ref|XP_002329591.1| predicted protein [Populus trichocarpa] gi|222870300|gb|EEF07431.1|
           predicted protein [Populus trichocarpa]
          Length = 893

 Score =  179 bits (453), Expect = 3e-43
 Identities = 93/103 (90%), Positives = 96/103 (93%), Gaps = 2/103 (1%)
 Frame = -1

Query: 303 TELVDRH*QSFRVAEKITQKVEGQLSKSQKEFLLCQQMRAIKEELGD--DDEDDVAALER 130
           TELVDRH QS RVAEKITQKVEGQLSKSQKEFLL QQMRAIKEELGD  DDEDDVAALER
Sbjct: 254 TELVDRHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAALER 313

Query: 129 KMQSAGMPPNVWKHAQRELRRLRKMQPQQPGYSSSHVYLELLA 1
           KMQSAGMP N+WKHAQRELRRL+KMQPQQPGY+SS VYLELLA
Sbjct: 314 KMQSAGMPSNIWKHAQRELRRLKKMQPQQPGYNSSRVYLELLA 356


>ref|XP_002326492.1| predicted protein [Populus trichocarpa] gi|222833814|gb|EEE72291.1|
           predicted protein [Populus trichocarpa]
          Length = 893

 Score =  177 bits (450), Expect = 6e-43
 Identities = 91/102 (89%), Positives = 96/102 (94%), Gaps = 2/102 (1%)
 Frame = -1

Query: 300 ELVDRH*QSFRVAEKITQKVEGQLSKSQKEFLLCQQMRAIKEELGD--DDEDDVAALERK 127
           ELVD+H QS RVAEKITQKVEGQLSKSQKEFLL QQMRAIKEELGD  DDEDDVAA+ERK
Sbjct: 255 ELVDQHLQSIRVAEKITQKVEGQLSKSQKEFLLRQQMRAIKEELGDNDDDEDDVAAIERK 314

Query: 126 MQSAGMPPNVWKHAQRELRRLRKMQPQQPGYSSSHVYLELLA 1
           MQSAGMP N+WKHAQRELRRL+KMQPQQPGY+SSHVYLELLA
Sbjct: 315 MQSAGMPSNIWKHAQRELRRLKKMQPQQPGYNSSHVYLELLA 356


>sp|O04979.2|LONP2_SPIOL RecName: Full=Lon protease homolog 2, peroxisomal
          Length = 887

 Score =  177 bits (449), Expect = 8e-43
 Identities = 92/103 (89%), Positives = 95/103 (92%), Gaps = 2/103 (1%)
 Frame = -1

Query: 303 TELVDRH*QSFRVAEKITQKVEGQLSKSQKEFLLCQQMRAIKEELGD--DDEDDVAALER 130
           TELVDRH QS RVAEKITQKVEGQLSKSQ+EFLL QQMRAIKEELGD  DDEDDVA LER
Sbjct: 249 TELVDRHLQSIRVAEKITQKVEGQLSKSQREFLLRQQMRAIKEELGDNDDDEDDVAVLER 308

Query: 129 KMQSAGMPPNVWKHAQRELRRLRKMQPQQPGYSSSHVYLELLA 1
           KMQSAGMP N+WKHAQRELRRL+KMQPQQPGYSSS VYLELLA
Sbjct: 309 KMQSAGMPANIWKHAQRELRRLKKMQPQQPGYSSSRVYLELLA 351


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