BLASTX nr result

ID: Coptis25_contig00024776 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024776
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307030.1| predicted protein [Populus trichocarpa] gi|2...   282   2e-74
ref|XP_002310517.1| predicted protein [Populus trichocarpa] gi|2...   278   4e-73
ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [...   270   7e-71
ref|XP_002526639.1| polygalacturonase, putative [Ricinus communi...   270   7e-71
emb|CBI37530.3| unnamed protein product [Vitis vinifera]              267   8e-70

>ref|XP_002307030.1| predicted protein [Populus trichocarpa] gi|222856479|gb|EEE94026.1|
           predicted protein [Populus trichocarpa]
          Length = 394

 Score =  282 bits (722), Expect = 2e-74
 Identities = 130/152 (85%), Positives = 145/152 (95%)
 Frame = +2

Query: 2   KDFGGVSDGKTCNTLAFRKAMQHLKSFGDKGGSQLNVPKGRWVTGSFNLTSNFTLFLEFG 181
           KDFGGV DGKT NT AFR+AM++++ FG++GG+QLNVP+GRWVTGSFNLTSNFTLFLE G
Sbjct: 4   KDFGGVGDGKTSNTEAFRRAMRYVQGFGERGGAQLNVPEGRWVTGSFNLTSNFTLFLEEG 63

Query: 182 AVLLGSQNPQEWPIIEPLPSYGRGRERLGGRHISLIHGDGLYDVVITGENGTIDGQGKMW 361
           AV+LGSQ+P+EWPIIEPLPSYGRGRERLGGRHISLIHGDGL +VVITG NGTIDGQGKMW
Sbjct: 64  AVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGDGLANVVITGNNGTIDGQGKMW 123

Query: 362 WDLWWNRTLEHTRGHLVELMNSQNILISNLTF 457
           W+LWWNRTLEHTRGHLVELMNSQ+ILISNLTF
Sbjct: 124 WELWWNRTLEHTRGHLVELMNSQDILISNLTF 155


>ref|XP_002310517.1| predicted protein [Populus trichocarpa] gi|222853420|gb|EEE90967.1|
           predicted protein [Populus trichocarpa]
          Length = 445

 Score =  278 bits (710), Expect = 4e-73
 Identities = 127/152 (83%), Positives = 142/152 (93%)
 Frame = +2

Query: 2   KDFGGVSDGKTCNTLAFRKAMQHLKSFGDKGGSQLNVPKGRWVTGSFNLTSNFTLFLEFG 181
           ++FGGV DGKT NT  FRKA+++L+ FG+ GG+QLNVPKGRWVTGSFNLTSNFTLFLE G
Sbjct: 38  REFGGVGDGKTSNTETFRKAIRYLQRFGESGGAQLNVPKGRWVTGSFNLTSNFTLFLEEG 97

Query: 182 AVLLGSQNPQEWPIIEPLPSYGRGRERLGGRHISLIHGDGLYDVVITGENGTIDGQGKMW 361
           AV+LGSQ+P+EWPIIEPLPSYGRGRERLGGRHISL+HGDGL +VVITG NGTIDGQGKMW
Sbjct: 98  AVILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLVHGDGLTNVVITGNNGTIDGQGKMW 157

Query: 362 WDLWWNRTLEHTRGHLVELMNSQNILISNLTF 457
           W+LWWNRTLEHTRGHLVELMNS NILI+NLTF
Sbjct: 158 WELWWNRTLEHTRGHLVELMNSNNILIANLTF 189


>ref|XP_004147365.1| PREDICTED: probable polygalacturonase-like [Cucumis sativus]
          Length = 472

 Score =  270 bits (691), Expect = 7e-71
 Identities = 125/151 (82%), Positives = 138/151 (91%)
 Frame = +2

Query: 5   DFGGVSDGKTCNTLAFRKAMQHLKSFGDKGGSQLNVPKGRWVTGSFNLTSNFTLFLEFGA 184
           DFGGV DGKT NT AFRKA+Q+++ FGDKGGS+L VPKG WVTGSFNLTSNFTLFL+ GA
Sbjct: 74  DFGGVGDGKTSNTEAFRKAIQYMRRFGDKGGSKLTVPKGSWVTGSFNLTSNFTLFLQRGA 133

Query: 185 VLLGSQNPQEWPIIEPLPSYGRGRERLGGRHISLIHGDGLYDVVITGENGTIDGQGKMWW 364
           ++L SQ+P EWPIIEPLPSYGRGRERLGGRHISLIHG+ L +VVITGENGTIDGQGKMWW
Sbjct: 134 LILASQDPDEWPIIEPLPSYGRGRERLGGRHISLIHGNALSNVVITGENGTIDGQGKMWW 193

Query: 365 DLWWNRTLEHTRGHLVELMNSQNILISNLTF 457
           +LWWNRTL HTRGHLVEL+NS NILISNLTF
Sbjct: 194 ELWWNRTLNHTRGHLVELINSHNILISNLTF 224


>ref|XP_002526639.1| polygalacturonase, putative [Ricinus communis]
           gi|223534031|gb|EEF35751.1| polygalacturonase, putative
           [Ricinus communis]
          Length = 480

 Score =  270 bits (691), Expect = 7e-71
 Identities = 124/151 (82%), Positives = 140/151 (92%)
 Frame = +2

Query: 5   DFGGVSDGKTCNTLAFRKAMQHLKSFGDKGGSQLNVPKGRWVTGSFNLTSNFTLFLEFGA 184
           DFGGV DGKT NT  FRKA+++++ F +KGGSQL VP+GRW+TGSFNLTSNFTLFLE GA
Sbjct: 82  DFGGVGDGKTSNTETFRKAVRYMQRFAEKGGSQLIVPRGRWLTGSFNLTSNFTLFLEEGA 141

Query: 185 VLLGSQNPQEWPIIEPLPSYGRGRERLGGRHISLIHGDGLYDVVITGENGTIDGQGKMWW 364
           V+LGSQ+P+EWPIIEPLPSYGRGRERLGGRHISLIHG+GL +V+ITG NG+IDGQGKMWW
Sbjct: 142 VILGSQDPKEWPIIEPLPSYGRGRERLGGRHISLIHGNGLTNVIITGNNGSIDGQGKMWW 201

Query: 365 DLWWNRTLEHTRGHLVELMNSQNILISNLTF 457
           +LWWNRTLEHTRGHLVELMNS NILISNLTF
Sbjct: 202 ELWWNRTLEHTRGHLVELMNSHNILISNLTF 232


>emb|CBI37530.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  267 bits (682), Expect = 8e-70
 Identities = 122/153 (79%), Positives = 141/153 (92%)
 Frame = +2

Query: 2   KDFGGVSDGKTCNTLAFRKAMQHLKSFGDKGGSQLNVPKGRWVTGSFNLTSNFTLFLEFG 181
           +DFGGV DG T NT  FR+A+++++SFG+ GGSQLNVP+GRWVTGSFNLTSNFTLFLE G
Sbjct: 80  RDFGGVGDGVTSNTETFRRAIRYMQSFGNIGGSQLNVPRGRWVTGSFNLTSNFTLFLEEG 139

Query: 182 AVLLGSQNPQEWPIIEPLPSYGRGRERLGGRHISLIHGDGLYDVVITGENGTIDGQGKMW 361
           AV+LGSQ+ ++WPIIEPLPSYGRGRERLGGRHISLIHGD L +VVITG+NGTIDGQGKMW
Sbjct: 140 AVILGSQDLEDWPIIEPLPSYGRGRERLGGRHISLIHGDALANVVITGQNGTIDGQGKMW 199

Query: 362 WDLWWNRTLEHTRGHLVELMNSQNILISNLTFL 460
           W+LWWNRTLEHTRGHL+E+ NS NILISNLTF+
Sbjct: 200 WELWWNRTLEHTRGHLLEIKNSHNILISNLTFM 232


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