BLASTX nr result

ID: Coptis25_contig00024771 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024771
         (932 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279783.1| PREDICTED: uncharacterized protein ycf36 [Vi...   318   1e-84
ref|XP_002308564.1| predicted protein [Populus trichocarpa] gi|2...   316   4e-84
ref|XP_002516448.1| conserved hypothetical protein [Ricinus comm...   300   3e-79
ref|XP_003589013.1| hypothetical protein MTR_1g016360 [Medicago ...   288   1e-75
ref|XP_004157359.1| PREDICTED: uncharacterized protein LOC101226...   286   5e-75

>ref|XP_002279783.1| PREDICTED: uncharacterized protein ycf36 [Vitis vinifera]
          Length = 268

 Score =  318 bits (815), Expect = 1e-84
 Identities = 173/269 (64%), Positives = 198/269 (73%), Gaps = 14/269 (5%)
 Frame = -2

Query: 883 MATLSILSPKPPLKTIFLHN------PISINKQTTLPNLQHKHTIILSSK---SSSFR-- 737
           MAT   LS K    T F  +      PI+  K    P+L ++   IL S+   SSSF   
Sbjct: 1   MATPLFLSTKSTQLTFFFPSKPNFLPPINPIKN---PSLHYRDQKILISRIPLSSSFTNG 57

Query: 736 ---PPEAECPVPFDQQPINEYQSLSSSFPFSWAVTDDLVEYSIRLIATGASFAFFIGLPV 566
              PPE ECPVP DQQPINEYQ+LS+SFPFSWA + D VEY  RL  TG SFA FIGLPV
Sbjct: 58  SNTPPETECPVPLDQQPINEYQTLSTSFPFSWA-SGDFVEYCSRLAVTGVSFALFIGLPV 116

Query: 565 AWFGVVNPESQPLKCGIGALSSGLFVVTLAVLRMHLGWAYVGNRLLSATVEYEETGWYDG 386
           AWFG V P+S+PLK  +GA+SSG+FVVTLAV+RM+LGWAYVGNRLLSATVEYEETGWYDG
Sbjct: 117 AWFGAVGPDSEPLKRILGAVSSGIFVVTLAVVRMYLGWAYVGNRLLSATVEYEETGWYDG 176

Query: 385 QVWIKSAQVLARDRLLGSYSVKPVLSRLKLTLVGLATSLAACIFLLVNIEGSQKVSYFSS 206
           Q+W+K+A+VLARDRLLGS+SVKPVLSRLK TLV LA SL  C FLL+NIEGSQ+     S
Sbjct: 177 QIWVKTAEVLARDRLLGSFSVKPVLSRLKYTLVTLAASLFVCAFLLINIEGSQRNLNIVS 236

Query: 205 QEPGGRSVVGVYKDDSARLFEQDDFCGEP 119
              GGR++ GVY DDSAR FE D FCGEP
Sbjct: 237 NGGGGRAIPGVYNDDSARSFEPDAFCGEP 265


>ref|XP_002308564.1| predicted protein [Populus trichocarpa] gi|222854540|gb|EEE92087.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score =  316 bits (810), Expect = 4e-84
 Identities = 161/252 (63%), Positives = 190/252 (75%), Gaps = 10/252 (3%)
 Frame = -2

Query: 838 IFLHNPISINKQTTLPNLQHKH----TIILSSKSSSFR------PPEAECPVPFDQQPIN 689
           + L +P  ++  T    + H H      +    SSSFR      PPE ECPVP DQQPIN
Sbjct: 6   LHLSSPFLLSSLTQKRFIYHHHHNYKNTLPKIPSSSFRNGSSNTPPETECPVPLDQQPIN 65

Query: 688 EYQSLSSSFPFSWAVTDDLVEYSIRLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGA 509
           EYQ+LS+SFPFSWA + D+VEY  RL  TGASFA  I LPVAWFG V P+++PLK  + A
Sbjct: 66  EYQNLSTSFPFSWA-SGDIVEYCSRLFVTGASFALLIALPVAWFGTVAPKTEPLKPVLAA 124

Query: 508 LSSGLFVVTLAVLRMHLGWAYVGNRLLSATVEYEETGWYDGQVWIKSAQVLARDRLLGSY 329
           LSSG+FVV+LAV+RM+LGWAYVGNRLLSATVEYEETGWYDGQ+W+K+A+VLARDRLLGS+
Sbjct: 125 LSSGVFVVSLAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGSF 184

Query: 328 SVKPVLSRLKLTLVGLATSLAACIFLLVNIEGSQKVSYFSSQEPGGRSVVGVYKDDSARL 149
           SVKPVLSRLK TLV LA SL  C+ L +NIEG QK SY   +E GGR++ GVY DDSAR 
Sbjct: 185 SVKPVLSRLKYTLVTLAASLFVCVVLFINIEGGQKGSYTPFEEAGGRAIPGVYNDDSARS 244

Query: 148 FEQDDFCGEPSP 113
           FE D FCGEP+P
Sbjct: 245 FEPDAFCGEPAP 256


>ref|XP_002516448.1| conserved hypothetical protein [Ricinus communis]
           gi|223544268|gb|EEF45789.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 267

 Score =  300 bits (768), Expect = 3e-79
 Identities = 151/229 (65%), Positives = 177/229 (77%), Gaps = 5/229 (2%)
 Frame = -2

Query: 790 NLQHKHTIILSSKSSSFR-----PPEAECPVPFDQQPINEYQSLSSSFPFSWAVTDDLVE 626
           N +H   +I     SSFR     P E ECPVP +QQPINEYQSLS+SFPFSW  ++ +VE
Sbjct: 37  NQRHCRNLIPKLPLSSFRNGSNTPSETECPVPLEQQPINEYQSLSTSFPFSWPASN-IVE 95

Query: 625 YSIRLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGALSSGLFVVTLAVLRMHLGWAY 446
           Y  RL  TGASFA FIGLPVAWFG V PES+P K  I A SSG+ +V+LAV+RM+LGWAY
Sbjct: 96  YCSRLFVTGASFALFIGLPVAWFGSVRPESEPFKPIIAAASSGILLVSLAVVRMYLGWAY 155

Query: 445 VGNRLLSATVEYEETGWYDGQVWIKSAQVLARDRLLGSYSVKPVLSRLKLTLVGLATSLA 266
           VGNRLLSATVEYEETGWYDGQ+W+K+A+VLARDRLLGS+SVKPVLSRLK TL+ LAT L 
Sbjct: 156 VGNRLLSATVEYEETGWYDGQIWVKTAEVLARDRLLGSFSVKPVLSRLKYTLLTLATLLL 215

Query: 265 ACIFLLVNIEGSQKVSYFSSQEPGGRSVVGVYKDDSARLFEQDDFCGEP 119
            C+ L +NIEG+QK  Y +S+    R++ GVY DDSAR FE D FCGEP
Sbjct: 216 GCVVLFINIEGAQKGVYVTSEATRDRTIPGVYNDDSARSFEPDAFCGEP 264


>ref|XP_003589013.1| hypothetical protein MTR_1g016360 [Medicago truncatula]
           gi|355478061|gb|AES59264.1| hypothetical protein
           MTR_1g016360 [Medicago truncatula]
          Length = 252

 Score =  288 bits (738), Expect = 1e-75
 Identities = 155/262 (59%), Positives = 186/262 (70%), Gaps = 4/262 (1%)
 Frame = -2

Query: 883 MATLSI-LSPK---PPLKTIFLHNPISINKQTTLPNLQHKHTIILSSKSSSFRPPEAECP 716
           MAT+SI +SPK   P  KT+F   PI  NK  T+ N  ++  + L   SS       ECP
Sbjct: 1   MATISIRMSPKLFSPSTKTLF---PIHTNKSITITNNSNRTKLSLLYLSSR---NGTECP 54

Query: 715 VPFDQQPINEYQSLSSSFPFSWAVTDDLVEYSIRLIATGASFAFFIGLPVAWFGVVNPES 536
           VP +QQPINEYQSLS+SFPFSWA   D+VEY  RL   G SFA  +GLPVAWFG V  + 
Sbjct: 55  VPLEQQPINEYQSLSTSFPFSWAA-GDVVEYGSRLFVVGFSFALLVGLPVAWFGTVGAQY 113

Query: 535 QPLKCGIGALSSGLFVVTLAVLRMHLGWAYVGNRLLSATVEYEETGWYDGQVWIKSAQVL 356
           +P K  + A SSG+  VT AV+RM+LGWAYVGNRLLSATVEYEETGWYDGQ+W+K+A+VL
Sbjct: 114 EPAKRIVCAASSGVLAVTFAVVRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAEVL 173

Query: 355 ARDRLLGSYSVKPVLSRLKLTLVGLATSLAACIFLLVNIEGSQKVSYFSSQEPGGRSVVG 176
           ARDRLLGS+SVKPVLSRLK+TLVGLA  L  C  + +NI+     SY +S+E G R++ G
Sbjct: 174 ARDRLLGSFSVKPVLSRLKITLVGLAACLVTCALIFINID----ESYLTSRETGVRAIPG 229

Query: 175 VYKDDSARLFEQDDFCGEPSPQ 110
            Y D+SAR FE D FCGEP  Q
Sbjct: 230 AYNDESARSFEPDAFCGEPDLQ 251


>ref|XP_004157359.1| PREDICTED: uncharacterized protein LOC101226963 [Cucumis sativus]
          Length = 297

 Score =  286 bits (732), Expect = 5e-75
 Identities = 147/241 (60%), Positives = 179/241 (74%), Gaps = 5/241 (2%)
 Frame = -2

Query: 832 LHNPISINKQTTLPNLQHKHTIILSSKSSSFRPPEAECPVPFDQQPINEYQSLSSSFPFS 653
           L +P +  +   L N   + T+  S +  S  PPE  CPVP +Q PINEYQ+LS+SFPFS
Sbjct: 50  LISPFTNTRLLHLRNSVSRMTLSFSFRKGSNVPPETGCPVPPEQLPINEYQTLSASFPFS 109

Query: 652 WAVTDDLVEYSIRLIATGASFAFFIGLPVAWFGVVNPESQPLKCGIGALSSGLFVVTLAV 473
           WA   D+VE+  RL+ATGASFA FIGLPVAWFG V  ES PLK  + A+SSG+  VT+AV
Sbjct: 110 WAA-GDIVEFCSRLVATGASFALFIGLPVAWFGTVGVESDPLKRSLCAVSSGILFVTIAV 168

Query: 472 LRMHLGWAYVGNRLLSATVEYEETGWYDGQVWIKSAQVLARDRLLGSYSVKPVLSRLKLT 293
           LRM+LGWAYVGNRLLSATVEYEETGWYDGQ+W+K+AQVLARDRLLGSY+VKPVL+RLK T
Sbjct: 169 LRMYLGWAYVGNRLLSATVEYEETGWYDGQIWVKTAQVLARDRLLGSYTVKPVLNRLKYT 228

Query: 292 LVGLATSLAACIFLLVNIEGSQKVSYF-----SSQEPGGRSVVGVYKDDSARLFEQDDFC 128
           LV LA SL   I +L+NI+G + +  F     ++ + GGR + GVY D+SAR FE D FC
Sbjct: 229 LVSLAASLFVSIVVLINIDGGELLGPFFTGKSAANDGGGRVIPGVYSDESARSFEPDAFC 288

Query: 127 G 125
           G
Sbjct: 289 G 289