BLASTX nr result

ID: Coptis25_contig00024766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024766
         (1040 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263...   609   e-172
emb|CBI36804.3| unnamed protein product [Vitis vinifera]              609   e-172
ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|2...   595   e-168
ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putat...   592   e-167
ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777...   586   e-165

>ref|XP_002280635.2| PREDICTED: uncharacterized protein LOC100263126 [Vitis vinifera]
          Length = 2002

 Score =  609 bits (1570), Expect = e-172
 Identities = 301/346 (86%), Positives = 324/346 (93%)
 Frame = +2

Query: 2    INRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLP 181
            INRTSELARVFGIDFFSVLSRGSQY VESMFLRLAHTQN+LAISPG QQVA+QPAMECLP
Sbjct: 567  INRTSELARVFGIDFFSVLSRGSQYHVESMFLRLAHTQNFLAISPGPQQVATQPAMECLP 626

Query: 182  LVMEPESRFYADPVVVLDFQSLYPSMIIAYNLCFCTCLGKVIPAKEDILGVCSYIPDPQH 361
            LVMEPES FYADPVVVLDFQSLYPSMIIAYNLC+ TCLGKV P+K D+LGV  Y PDP  
Sbjct: 627  LVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCYSTCLGKVAPSKADVLGVSIYSPDPHA 686

Query: 362  LMDIKNRILLTPNGVMYVPSEVRKGVLPRLLEEILSTRIMVKRAMKSLTPSERVSYRIFN 541
            L D+K++ILLTPNGVMYVPS+ RKGVLPRLLEEILSTRIMVK+AMK L PS++V  RIFN
Sbjct: 687  LHDLKDQILLTPNGVMYVPSKARKGVLPRLLEEILSTRIMVKKAMKKLVPSQQVLQRIFN 746

Query: 542  ARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRRTLENAISYVNSHDKWKARVI 721
            ARQLALKLI+NVTYGYTAAG+SGRMPCAELADSIVQCGRRTLENAIS VN+HDKWKA+VI
Sbjct: 747  ARQLALKLIANVTYGYTAAGYSGRMPCAELADSIVQCGRRTLENAISLVNTHDKWKAKVI 806

Query: 722  YGDTDSMFVLLKGRTMKESFSIGQEIASVITSMNPAPVTLKMEKVYHPCFLLTKKRYVGY 901
            YGDTDSMFVLLKGRT+KESF IG EIAS +T+MNP PVTLKMEKVYHPCFLLTKKRYVGY
Sbjct: 807  YGDTDSMFVLLKGRTVKESFQIGHEIASAVTAMNPNPVTLKMEKVYHPCFLLTKKRYVGY 866

Query: 902  SYETPDQVEPSFDAKGIETVRRDSCGAVAKTMEQSLRLFFEHQDIS 1039
            SYE+PDQ+EP+FDAKGIETVRRD+CGAVAKTMEQSLRLFFEHQDIS
Sbjct: 867  SYESPDQIEPTFDAKGIETVRRDTCGAVAKTMEQSLRLFFEHQDIS 912


>emb|CBI36804.3| unnamed protein product [Vitis vinifera]
          Length = 1732

 Score =  609 bits (1570), Expect = e-172
 Identities = 301/346 (86%), Positives = 324/346 (93%)
 Frame = +2

Query: 2    INRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLP 181
            INRTSELARVFGIDFFSVLSRGSQY VESMFLRLAHTQN+LAISPG QQVA+QPAMECLP
Sbjct: 1124 INRTSELARVFGIDFFSVLSRGSQYHVESMFLRLAHTQNFLAISPGPQQVATQPAMECLP 1183

Query: 182  LVMEPESRFYADPVVVLDFQSLYPSMIIAYNLCFCTCLGKVIPAKEDILGVCSYIPDPQH 361
            LVMEPES FYADPVVVLDFQSLYPSMIIAYNLC+ TCLGKV P+K D+LGV  Y PDP  
Sbjct: 1184 LVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCYSTCLGKVAPSKADVLGVSIYSPDPHA 1243

Query: 362  LMDIKNRILLTPNGVMYVPSEVRKGVLPRLLEEILSTRIMVKRAMKSLTPSERVSYRIFN 541
            L D+K++ILLTPNGVMYVPS+ RKGVLPRLLEEILSTRIMVK+AMK L PS++V  RIFN
Sbjct: 1244 LHDLKDQILLTPNGVMYVPSKARKGVLPRLLEEILSTRIMVKKAMKKLVPSQQVLQRIFN 1303

Query: 542  ARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRRTLENAISYVNSHDKWKARVI 721
            ARQLALKLI+NVTYGYTAAG+SGRMPCAELADSIVQCGRRTLENAIS VN+HDKWKA+VI
Sbjct: 1304 ARQLALKLIANVTYGYTAAGYSGRMPCAELADSIVQCGRRTLENAISLVNTHDKWKAKVI 1363

Query: 722  YGDTDSMFVLLKGRTMKESFSIGQEIASVITSMNPAPVTLKMEKVYHPCFLLTKKRYVGY 901
            YGDTDSMFVLLKGRT+KESF IG EIAS +T+MNP PVTLKMEKVYHPCFLLTKKRYVGY
Sbjct: 1364 YGDTDSMFVLLKGRTVKESFQIGHEIASAVTAMNPNPVTLKMEKVYHPCFLLTKKRYVGY 1423

Query: 902  SYETPDQVEPSFDAKGIETVRRDSCGAVAKTMEQSLRLFFEHQDIS 1039
            SYE+PDQ+EP+FDAKGIETVRRD+CGAVAKTMEQSLRLFFEHQDIS
Sbjct: 1424 SYESPDQIEPTFDAKGIETVRRDTCGAVAKTMEQSLRLFFEHQDIS 1469


>ref|XP_002319017.1| predicted protein [Populus trichocarpa] gi|222857393|gb|EEE94940.1|
            predicted protein [Populus trichocarpa]
          Length = 760

 Score =  595 bits (1535), Expect = e-168
 Identities = 293/346 (84%), Positives = 322/346 (93%)
 Frame = +2

Query: 2    INRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLP 181
            INRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLP
Sbjct: 151  INRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLP 210

Query: 182  LVMEPESRFYADPVVVLDFQSLYPSMIIAYNLCFCTCLGKVIPAKEDILGVCSYIPDPQH 361
            LVMEPES FYADPVVVLDFQSLYPSMIIAYNLCFCTCLG V P+K + LGV S+  DP  
Sbjct: 211  LVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCFCTCLGNVAPSKANTLGVSSFSTDPSV 270

Query: 362  LMDIKNRILLTPNGVMYVPSEVRKGVLPRLLEEILSTRIMVKRAMKSLTPSERVSYRIFN 541
            L D+K++ILLTPNG MYVPSE+RKGVLPRLLEEILSTRIM+K+AMK L PS++V +RIFN
Sbjct: 271  LRDLKDKILLTPNGTMYVPSEIRKGVLPRLLEEILSTRIMLKQAMKKLAPSQQVLHRIFN 330

Query: 542  ARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRRTLENAISYVNSHDKWKARVI 721
            ARQLALKLI+NVTYGYTAAGFSGRMPCAELADSIVQCGR TLE AIS VN+++KWKA+VI
Sbjct: 331  ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISLVNANEKWKAKVI 390

Query: 722  YGDTDSMFVLLKGRTMKESFSIGQEIASVITSMNPAPVTLKMEKVYHPCFLLTKKRYVGY 901
            YGDTDSMFVLLKGR++KESF IG+EIAS +T++NP PVTLK+EKVYHPCFLLTKKRYVGY
Sbjct: 391  YGDTDSMFVLLKGRSVKESFQIGREIASAVTAINPDPVTLKLEKVYHPCFLLTKKRYVGY 450

Query: 902  SYETPDQVEPSFDAKGIETVRRDSCGAVAKTMEQSLRLFFEHQDIS 1039
            SYE+ DQ+EP FDAKGIETVRRD+CGAVAK MEQSLR+FFEH+DIS
Sbjct: 451  SYESADQIEPMFDAKGIETVRRDTCGAVAKIMEQSLRIFFEHEDIS 496


>ref|XP_002512387.1| DNA polymerase zeta catalytic subunit, putative [Ricinus communis]
            gi|223548348|gb|EEF49839.1| DNA polymerase zeta catalytic
            subunit, putative [Ricinus communis]
          Length = 2066

 Score =  592 bits (1527), Expect = e-167
 Identities = 296/346 (85%), Positives = 319/346 (92%)
 Frame = +2

Query: 2    INRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLP 181
            INRTSELARVFGIDFFSVLSRGSQYRVESM LRLAHTQNYLAISPGNQQVASQPAMECLP
Sbjct: 588  INRTSELARVFGIDFFSVLSRGSQYRVESMLLRLAHTQNYLAISPGNQQVASQPAMECLP 647

Query: 182  LVMEPESRFYADPVVVLDFQSLYPSMIIAYNLCFCTCLGKVIPAKEDILGVCSYIPDPQH 361
            LVMEPES FYADPVVVLDFQSLYPSMIIAYNLCFCTCLG V  +K + LGV S+ PDP+ 
Sbjct: 648  LVMEPESGFYADPVVVLDFQSLYPSMIIAYNLCFCTCLGNVSSSKVNTLGVSSFSPDPRV 707

Query: 362  LMDIKNRILLTPNGVMYVPSEVRKGVLPRLLEEILSTRIMVKRAMKSLTPSERVSYRIFN 541
            L D+K+ ILLTPNGVMYVPS+VRKGVLPRLLEEILSTRIMVK+AMK L P+++V +RIFN
Sbjct: 708  LGDLKDEILLTPNGVMYVPSKVRKGVLPRLLEEILSTRIMVKQAMKKLAPTQQVLHRIFN 767

Query: 542  ARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRRTLENAISYVNSHDKWKARVI 721
            ARQLALKLI+NVTYGYTAAGFSGRMPCAELADSIVQCGR TLE AIS VN+ DKW ARVI
Sbjct: 768  ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISLVNASDKWNARVI 827

Query: 722  YGDTDSMFVLLKGRTMKESFSIGQEIASVITSMNPAPVTLKMEKVYHPCFLLTKKRYVGY 901
            YGDTDSMFVLLKGRT++ESF IG+EIAS +T+MNP PVTLK+EKVYHPCFLLTKKRYVGY
Sbjct: 828  YGDTDSMFVLLKGRTVEESFQIGREIASAVTAMNPDPVTLKLEKVYHPCFLLTKKRYVGY 887

Query: 902  SYETPDQVEPSFDAKGIETVRRDSCGAVAKTMEQSLRLFFEHQDIS 1039
            SYE+ DQ EP FDAKGIETVRRD+CGAVAK +EQSLRLFFEHQDIS
Sbjct: 888  SYESADQTEPVFDAKGIETVRRDTCGAVAKMLEQSLRLFFEHQDIS 933


>ref|XP_003520807.1| PREDICTED: uncharacterized protein LOC100777934 [Glycine max]
          Length = 2793

 Score =  586 bits (1510), Expect = e-165
 Identities = 287/345 (83%), Positives = 319/345 (92%)
 Frame = +2

Query: 2    INRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGNQQVASQPAMECLP 181
            +NRTSELARVFGI+FFSVLSRGSQYRVESMFLRLAHTQNYLAISPG QQVASQPAMECLP
Sbjct: 1341 VNRTSELARVFGIEFFSVLSRGSQYRVESMFLRLAHTQNYLAISPGKQQVASQPAMECLP 1400

Query: 182  LVMEPESRFYADPVVVLDFQSLYPSMIIAYNLCFCTCLGKVIPAKEDILGVCSYIPDPQH 361
            LVMEPES FY+DPVVVLDFQSLYPSMIIAYNLCFCTCLGKV+ +K + LGV S+ P+   
Sbjct: 1401 LVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVVASKANTLGVSSFSPEQHV 1460

Query: 362  LMDIKNRILLTPNGVMYVPSEVRKGVLPRLLEEILSTRIMVKRAMKSLTPSERVSYRIFN 541
            L D+K++ILLTPNGVM+VPS+VR+G+LPRLLEEIL+TRIMVK+A+K L P E+V  RIFN
Sbjct: 1461 LQDLKDQILLTPNGVMFVPSKVRRGILPRLLEEILTTRIMVKQAIKKLAPPEKVLQRIFN 1520

Query: 542  ARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRRTLENAISYVNSHDKWKARVI 721
            ARQLALKLI+NVTYGYTAAGFSGRMPCAELADSIVQCGR TLE AIS+VN H+KW A+VI
Sbjct: 1521 ARQLALKLIANVTYGYTAAGFSGRMPCAELADSIVQCGRSTLEKAISFVNLHEKWNAKVI 1580

Query: 722  YGDTDSMFVLLKGRTMKESFSIGQEIASVITSMNPAPVTLKMEKVYHPCFLLTKKRYVGY 901
            YGDTDSMFVLL+G T+KESF IG EIAS IT+MNP+PVTLKMEKVYHPCFLLTKKRYVGY
Sbjct: 1581 YGDTDSMFVLLRGCTVKESFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLLTKKRYVGY 1640

Query: 902  SYETPDQVEPSFDAKGIETVRRDSCGAVAKTMEQSLRLFFEHQDI 1036
            SYE+PDQ+EP FDAKGIETVRRD+CGAVAK MEQSLRLFFEHQ++
Sbjct: 1641 SYESPDQIEPVFDAKGIETVRRDTCGAVAKIMEQSLRLFFEHQNL 1685


Top