BLASTX nr result

ID: Coptis25_contig00024764 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024764
         (214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26296.3| unnamed protein product [Vitis vinifera]              101   7e-20
ref|XP_002279192.1| PREDICTED: leucine-rich repeat extensin-like...   101   7e-20
ref|XP_002514492.1| LRX2, putative [Ricinus communis] gi|2235463...   100   9e-20
ref|XP_002308141.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_002324259.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19

>emb|CBI26296.3| unnamed protein product [Vitis vinifera]
          Length = 433

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/68 (67%), Positives = 58/68 (85%)
 Frame = +2

Query: 2   NNDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLLKNLTVFDVSRNKLVGSLPET 181
           NN+L+GC PSSL+++  TLNE+I+ N+G+ GCL PEIGLLKN+TVFDVS N+LVG LPET
Sbjct: 268 NNNLNGCLPSSLSKMAKTLNELIITNAGLKGCLSPEIGLLKNVTVFDVSSNELVGPLPET 327

Query: 182 MGNMKSSE 205
           +G MKS E
Sbjct: 328 IGEMKSLE 335


>ref|XP_002279192.1| PREDICTED: leucine-rich repeat extensin-like protein 6-like [Vitis
           vinifera]
          Length = 394

 Score =  101 bits (251), Expect = 7e-20
 Identities = 46/68 (67%), Positives = 58/68 (85%)
 Frame = +2

Query: 2   NNDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLLKNLTVFDVSRNKLVGSLPET 181
           NN+L+GC PSSL+++  TLNE+I+ N+G+ GCL PEIGLLKN+TVFDVS N+LVG LPET
Sbjct: 218 NNNLNGCLPSSLSKMAKTLNELIITNAGLKGCLSPEIGLLKNVTVFDVSSNELVGPLPET 277

Query: 182 MGNMKSSE 205
           +G MKS E
Sbjct: 278 IGEMKSLE 285


>ref|XP_002514492.1| LRX2, putative [Ricinus communis] gi|223546391|gb|EEF47892.1| LRX2,
           putative [Ricinus communis]
          Length = 766

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/68 (69%), Positives = 53/68 (77%)
 Frame = +2

Query: 2   NNDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLLKNLTVFDVSRNKLVGSLPET 181
           NN+L GC P S+  +G TLNEIILMN  +TGCLPPEIGLLK LTVFDVS N L GSLP +
Sbjct: 225 NNNLGGCIPGSIGNMGKTLNEIILMNDNLTGCLPPEIGLLKELTVFDVSFNNLQGSLPSS 284

Query: 182 MGNMKSSE 205
           +GNMK  E
Sbjct: 285 IGNMKKVE 292


>ref|XP_002308141.1| predicted protein [Populus trichocarpa] gi|222854117|gb|EEE91664.1|
           predicted protein [Populus trichocarpa]
          Length = 525

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 45/68 (66%), Positives = 55/68 (80%)
 Frame = +2

Query: 2   NNDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLLKNLTVFDVSRNKLVGSLPET 181
           NN+L GC P S+ ++G TLNEIILMN  +TGCLPP+IG+LK +TVFDVS N L GSLP +
Sbjct: 224 NNNLGGCIPGSIGKMGKTLNEIILMNDNLTGCLPPQIGMLKEVTVFDVSFNHLQGSLPSS 283

Query: 182 MGNMKSSE 205
           +GNMKS E
Sbjct: 284 IGNMKSVE 291


>ref|XP_002324259.1| predicted protein [Populus trichocarpa] gi|222865693|gb|EEF02824.1|
           predicted protein [Populus trichocarpa]
          Length = 496

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/68 (66%), Positives = 54/68 (79%)
 Frame = +2

Query: 2   NNDLSGCFPSSLARLGNTLNEIILMNSGITGCLPPEIGLLKNLTVFDVSRNKLVGSLPET 181
           NN   GCFP SLA +  TLNE+ILMN+G+  CLP EIGLLK +TVFD S NKLVGSLP+T
Sbjct: 250 NNKFHGCFPPSLANMSKTLNEVILMNNGLRSCLPKEIGLLKKVTVFDASNNKLVGSLPDT 309

Query: 182 MGNMKSSE 205
           +G+M+S E
Sbjct: 310 IGDMESLE 317


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