BLASTX nr result

ID: Coptis25_contig00024749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024749
         (515 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311209.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_003616603.1| hypothetical protein MTR_5g082260 [Medicago ...   146   2e-33
ref|XP_003544103.1| PREDICTED: uncharacterized protein LOC100816...   145   3e-33
ref|XP_003519388.1| PREDICTED: uncharacterized protein LOC100778...   145   3e-33
ref|XP_002271131.2| PREDICTED: uncharacterized protein LOC100267...   145   3e-33

>ref|XP_002311209.1| predicted protein [Populus trichocarpa] gi|222851029|gb|EEE88576.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  147 bits (370), Expect = 1e-33
 Identities = 75/105 (71%), Positives = 83/105 (79%), Gaps = 8/105 (7%)
 Frame = +2

Query: 104 DGIGVVVDASVFHESFLVGGIAKLLFGDLLKEGTPLSVNPLVIWAWAGLLINAINSIPAG 283
           DGIG+VVDASVFHESFL GGIAKLL GD+LKEGTP+SVNPLVIWAWAGLLINAINSIPAG
Sbjct: 230 DGIGLVVDASVFHESFLAGGIAKLLLGDVLKEGTPISVNPLVIWAWAGLLINAINSIPAG 289

Query: 284 EVDGGRISFALWGRKVYS--------LLSRLNLLIQVCSNWITTI 394
           E+DGGRISFA+WGRK  +        LL   +LL  V   W+  I
Sbjct: 290 ELDGGRISFAIWGRKASARFTGFSIVLLGLSSLLNDVAFFWVVLI 334


>ref|XP_003616603.1| hypothetical protein MTR_5g082260 [Medicago truncatula]
           gi|355517938|gb|AES99561.1| hypothetical protein
           MTR_5g082260 [Medicago truncatula]
          Length = 545

 Score =  146 bits (368), Expect = 2e-33
 Identities = 74/106 (69%), Positives = 82/106 (77%), Gaps = 8/106 (7%)
 Frame = +2

Query: 101 SDGIGVVVDASVFHESFLVGGIAKLLFGDLLKEGTPLSVNPLVIWAWAGLLINAINSIPA 280
           SDGIGVVVDASVFHESFL GGIAKL  G++LKEGTP+S+NPLVIWAWAGLLINAINSIPA
Sbjct: 357 SDGIGVVVDASVFHESFLAGGIAKLFLGNVLKEGTPISINPLVIWAWAGLLINAINSIPA 416

Query: 281 GEVDGGRISFALWGRKV--------YSLLSRLNLLIQVCSNWITTI 394
           GE+DGGRISFA+WGRK           LL   +LL  V   W+  I
Sbjct: 417 GEIDGGRISFAIWGRKASIRFTGFSIVLLGLSSLLNDVAFYWVVLI 462


>ref|XP_003544103.1| PREDICTED: uncharacterized protein LOC100816506 [Glycine max]
          Length = 520

 Score =  145 bits (367), Expect = 3e-33
 Identities = 80/139 (57%), Positives = 88/139 (63%), Gaps = 8/139 (5%)
 Frame = +2

Query: 2   PNREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGIGVVVDASVFHESFLVGGIAKLLF 181
           PNRED                            SDGIGVVVDASVFHESFL GGIAKLL 
Sbjct: 330 PNREDLLKVAAAGPIAGYALGLLLLLLGFILPPSDGIGVVVDASVFHESFLAGGIAKLLL 389

Query: 182 GDLLKEGTPLSVNPLVIWAWAGLLINAINSIPAGEVDGGRISFALWGRKV--------YS 337
           G++LKEGT +S+NPLVIWAWAGLLINAINSIPAGE+DGGRISFALWGRK          +
Sbjct: 390 GNVLKEGTAISINPLVIWAWAGLLINAINSIPAGELDGGRISFALWGRKASLRFTGVSIA 449

Query: 338 LLSRLNLLIQVCSNWITTI 394
           LL   +LL  V   W+  I
Sbjct: 450 LLGVSSLLNDVAFYWVVLI 468


>ref|XP_003519388.1| PREDICTED: uncharacterized protein LOC100778800 [Glycine max]
          Length = 523

 Score =  145 bits (367), Expect = 3e-33
 Identities = 80/139 (57%), Positives = 88/139 (63%), Gaps = 8/139 (5%)
 Frame = +2

Query: 2   PNREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGIGVVVDASVFHESFLVGGIAKLLF 181
           PNRED                            SDGIGVVVDASVFHESFL GGIAKLL 
Sbjct: 333 PNREDLLKVAAAGPIAGYALGLLLLLLGFVLPPSDGIGVVVDASVFHESFLAGGIAKLLL 392

Query: 182 GDLLKEGTPLSVNPLVIWAWAGLLINAINSIPAGEVDGGRISFALWGRKV--------YS 337
           G++LKEGT +S+NPLVIWAWAGLLINAINSIPAGE+DGGRISFALWGRK          +
Sbjct: 393 GNVLKEGTAISINPLVIWAWAGLLINAINSIPAGELDGGRISFALWGRKASLRFTGVSIA 452

Query: 338 LLSRLNLLIQVCSNWITTI 394
           LL   +LL  V   W+  I
Sbjct: 453 LLGVSSLLNDVAFYWVVLI 471


>ref|XP_002271131.2| PREDICTED: uncharacterized protein LOC100267324 [Vitis vinifera]
           gi|297736633|emb|CBI25504.3| unnamed protein product
           [Vitis vinifera]
          Length = 543

 Score =  145 bits (367), Expect = 3e-33
 Identities = 79/139 (56%), Positives = 87/139 (62%), Gaps = 8/139 (5%)
 Frame = +2

Query: 2   PNREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGIGVVVDASVFHESFLVGGIAKLLF 181
           PNRED                            SDGIGVVVDASVFHES L GGIAKLL 
Sbjct: 353 PNREDLLKVAAAGPIAGFSLGLVLLLLGFLLPPSDGIGVVVDASVFHESLLAGGIAKLLL 412

Query: 182 GDLLKEGTPLSVNPLVIWAWAGLLINAINSIPAGEVDGGRISFALWGRKV--------YS 337
           GD+LKEGTP+SVNPL+IWAWAGLLINAINSIPAGE+DGGRISFA+WGRK          +
Sbjct: 413 GDVLKEGTPISVNPLLIWAWAGLLINAINSIPAGELDGGRISFAIWGRKASARFTAASIA 472

Query: 338 LLSRLNLLIQVCSNWITTI 394
           LL   +L   V   W+  I
Sbjct: 473 LLGLSSLFNDVAFYWVVLI 491


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