BLASTX nr result

ID: Coptis25_contig00024743 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024743
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262985.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinife...   141   5e-32
gb|ACD62528.1| bet1-like snare 1-1 [Malus x domestica]                139   2e-31
gb|AFK36257.1| unknown [Medicago truncatula]                          138   4e-31
ref|XP_003521277.1| PREDICTED: bet1-like SNARE 1-1-like [Glycine...   137   9e-31
gb|ACU19551.1| unknown [Glycine max]                                  137   9e-31

>ref|XP_002262985.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinifera]
           gi|297744115|emb|CBI37085.3| unnamed protein product
           [Vitis vinifera]
          Length = 123

 Score =  141 bits (356), Expect = 5e-32
 Identities = 68/95 (71%), Positives = 83/95 (87%), Gaps = 2/95 (2%)
 Frame = -3

Query: 374 DGIEEGGIRAT--VYSHDVNDHDNEKALDGLHDRVNLLRTLTGDIHEEVNSHNRVLDGMG 201
           DGIEEGGIRA+    SH++++HDNE+A+DGL DRVNLL+ LTGDIHEEV SHNR+LD +G
Sbjct: 16  DGIEEGGIRASSSYSSHEIDEHDNERAVDGLQDRVNLLKRLTGDIHEEVESHNRMLDRVG 75

Query: 200 NDMDASRGTMSGTMDRFKSVFKTKSSRRTFTLAST 96
           NDMDASRG +SGTMDRFK VF+T+SSRR FTL ++
Sbjct: 76  NDMDASRGILSGTMDRFKMVFETRSSRRMFTLVAS 110


>gb|ACD62528.1| bet1-like snare 1-1 [Malus x domestica]
          Length = 122

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/94 (68%), Positives = 83/94 (88%), Gaps = 1/94 (1%)
 Frame = -3

Query: 374 DGIEEGGIRATV-YSHDVNDHDNEKALDGLHDRVNLLRTLTGDIHEEVNSHNRVLDGMGN 198
           DGIEEGGIR++  YSH++++HDNE+A+DGL DRVNLL+ L+GDIHEEV +HN +LD MGN
Sbjct: 16  DGIEEGGIRSSASYSHEIDEHDNERAVDGLQDRVNLLKRLSGDIHEEVETHNHMLDRMGN 75

Query: 197 DMDASRGTMSGTMDRFKSVFKTKSSRRTFTLAST 96
           DMD+SRG +SGTMD+FK VF+TKSS+R FTL ++
Sbjct: 76  DMDSSRGVLSGTMDKFKMVFETKSSQRMFTLVAS 109


>gb|AFK36257.1| unknown [Medicago truncatula]
          Length = 127

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/98 (67%), Positives = 84/98 (85%), Gaps = 5/98 (5%)
 Frame = -3

Query: 374 DGIEEGGIRATVY-----SHDVNDHDNEKALDGLHDRVNLLRTLTGDIHEEVNSHNRVLD 210
           DGIEEGGIRA+       SH++++HDNE+A+DGL DRVNLL+ L+GDIHEEV+SHNR+LD
Sbjct: 17  DGIEEGGIRASSMYSSGSSHEIDEHDNEQAMDGLQDRVNLLKRLSGDIHEEVDSHNRMLD 76

Query: 209 GMGNDMDASRGTMSGTMDRFKSVFKTKSSRRTFTLAST 96
            MGNDMD+SRG +SGTMD+FK VF+TKSSRR F+L ++
Sbjct: 77  HMGNDMDSSRGVLSGTMDKFKMVFETKSSRRMFSLVAS 114


>ref|XP_003521277.1| PREDICTED: bet1-like SNARE 1-1-like [Glycine max]
          Length = 125

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/96 (69%), Positives = 86/96 (89%), Gaps = 3/96 (3%)
 Frame = -3

Query: 374 DGIEEGGIRAT-VYS--HDVNDHDNEKALDGLHDRVNLLRTLTGDIHEEVNSHNRVLDGM 204
           DGIEEGGIRA+ VYS  H++++HDNE+ALDGL DRVNLL+ L+GDI+EEV+SHNR+LD M
Sbjct: 16  DGIEEGGIRASSVYSSSHEIDEHDNEQALDGLQDRVNLLKRLSGDINEEVDSHNRMLDRM 75

Query: 203 GNDMDASRGTMSGTMDRFKSVFKTKSSRRTFTLAST 96
           GNDMD+SRG +SGTMD+FK VF+TKS++R FTL ++
Sbjct: 76  GNDMDSSRGVLSGTMDKFKMVFETKSNQRMFTLVAS 111


>gb|ACU19551.1| unknown [Glycine max]
          Length = 124

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/96 (69%), Positives = 86/96 (89%), Gaps = 3/96 (3%)
 Frame = -3

Query: 374 DGIEEGGIRAT-VYS--HDVNDHDNEKALDGLHDRVNLLRTLTGDIHEEVNSHNRVLDGM 204
           DGIEEGGIRA+ VYS  H++++HDNE+ALDGL DRVNLL+ L+GDI+EEV+SHNR+LD M
Sbjct: 16  DGIEEGGIRASSVYSSSHEIDEHDNEQALDGLQDRVNLLKRLSGDINEEVDSHNRMLDRM 75

Query: 203 GNDMDASRGTMSGTMDRFKSVFKTKSSRRTFTLAST 96
           GNDMD+SRG +SGTMD+FK VF+TKS++R FTL ++
Sbjct: 76  GNDMDSSRGVLSGTMDKFKMVFETKSNQRMFTLVAS 111