BLASTX nr result

ID: Coptis25_contig00024742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024742
         (924 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283745.1| PREDICTED: GATA transcription factor 9 [Viti...   201   2e-49
ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Viti...   193   5e-47
gb|ADL36690.1| GATA domain class transcription factor [Malus x d...   186   7e-45
ref|XP_003550120.1| PREDICTED: GATA transcription factor 12-like...   176   9e-42
ref|XP_003545608.1| PREDICTED: GATA transcription factor 12-like...   168   1e-39

>ref|XP_002283745.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera]
           gi|147811360|emb|CAN61228.1| hypothetical protein
           VITISV_004677 [Vitis vinifera]
          Length = 342

 Score =  201 bits (511), Expect = 2e-49
 Identities = 111/190 (58%), Positives = 127/190 (66%), Gaps = 2/190 (1%)
 Frame = +1

Query: 235 MEAPEFFQNTYNSSSRNGNNSQYTPEKRHSADTKPG--DHFIIEDLLDFSNEDIAIGDGT 408
           MEAPEFFQ  +  +      SQ+  EKR S DTKPG  DHFIIEDLLDFSN+D  I DGT
Sbjct: 1   MEAPEFFQGGFCIAPA----SQFGTEKRIS-DTKPGGGDHFIIEDLLDFSNDDAVITDGT 55

Query: 409 FDNITGXXXXXXXXXXXXXXXXXYSGSEPHFTGDMACHSLPDAQFSGELCVPYDDLAELE 588
           FD +TG                  SG EP F GD+   +  DA FS +LCVPYDDLAELE
Sbjct: 56  FDTVTGTSTDSSTFTIVDSCNSV-SGCEPQFAGDIGSRNYTDAHFSSDLCVPYDDLAELE 114

Query: 589 WLSNFVEDSFSSDDLQKLQLISGMKARTNEVSETHDYQPENNRSNPIFSPDVSVPGKARS 768
           WLSN VE+SFSS+DL+KLQLISGMKA T E SET D+QPENN++ P+   D   P KARS
Sbjct: 115 WLSNIVEESFSSEDLEKLQLISGMKANTEEASETRDFQPENNQNPPLSLRD--FPAKARS 172

Query: 769 KRSRAAPCNW 798
           KR+RA PC W
Sbjct: 173 KRARAMPCKW 182


>ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera]
          Length = 329

 Score =  193 bits (490), Expect = 5e-47
 Identities = 99/191 (51%), Positives = 127/191 (66%), Gaps = 2/191 (1%)
 Frame = +1

Query: 235 MEAPEFFQNTYNSSSRNGNNSQYTPEKRHSADTKPGDHFIIEDLLDFSNEDIAIGDGTFD 414
           MEA  FF   Y S+  +    +++ EKR   + KPGDHF++EDLLDF N+D  + DG FD
Sbjct: 1   MEASSFFPGGYYSAGAD----EFSQEKR---EQKPGDHFLVEDLLDFPNDDDIMTDGFFD 53

Query: 415 NITGXXXXXXXXXXXXXXXXXYSGSEPHFTGDMACHSLPDAQFSGELCVPYDDLAELEWL 594
            +TG                  SG+EPHF+GD+ C +  DAQFSGELCVP D+LAELEWL
Sbjct: 54  TVTGNSTDSSTVTVVDSCNSSLSGNEPHFSGDVGCRNFTDAQFSGELCVPCDELAELEWL 113

Query: 595 SNFVEDSFSSDDLQKLQLISGMKA--RTNEVSETHDYQPENNRSNPIFSPDVSVPGKARS 768
           SNFVE+SFSS+DL K+Q++SG+KA   T E  E   +QPE  RS PI  P ++VPGKARS
Sbjct: 114 SNFVEESFSSEDLHKIQVLSGIKAPLHTTESPEP-QFQPETARSEPILQPPMNVPGKARS 172

Query: 769 KRSRAAPCNWA 801
           KR R+ PC+W+
Sbjct: 173 KRPRSVPCDWS 183


>gb|ADL36690.1| GATA domain class transcription factor [Malus x domestica]
          Length = 375

 Score =  186 bits (472), Expect = 7e-45
 Identities = 110/211 (52%), Positives = 133/211 (63%), Gaps = 23/211 (10%)
 Frame = +1

Query: 235 MEAPEFFQNTYNSSSRNGNNSQYTPEKRHSADTKP--------GDHFIIEDLLDFSNEDI 390
           MEAPE+++ T+          Q+TPEKRHS D+          GDHF++EDLLDFSNED 
Sbjct: 1   MEAPEYYKKTFCP--------QFTPEKRHSFDSSNNKTAIGGGGDHFMVEDLLDFSNEDD 52

Query: 391 A-IGDG----TFDNITGXXXXXXXXXXXXXXXXX-YSGSEPHFTGDMACHSLPDAQFSGE 552
           A I DG     FDN+ G                  +SGSEP+F       +L D  FS +
Sbjct: 53  AVITDGGCPAAFDNVIGNSTDSSPLNVIDSCNSSSFSGSEPNF----GSRNLADGPFSSD 108

Query: 553 LCVPYDDLAELEWLSNFVEDSFSSDDLQKLQLISGMKARTNEVS-ETHDYQPE------- 708
           LCVP DDLAELEWLSNFVE+SFSS+DLQKLQLISGMK R ++ + ET  +QP+       
Sbjct: 109 LCVPCDDLAELEWLSNFVEESFSSEDLQKLQLISGMKPRPDQAAFETRQFQPDPTRTNNN 168

Query: 709 -NNRSNPIFSPDVSVPGKARSKRSRAAPCNW 798
            N  +NPIF+P+VSVP KARSKRSRAAPCNW
Sbjct: 169 PNGNNNPIFNPEVSVPAKARSKRSRAAPCNW 199


>ref|XP_003550120.1| PREDICTED: GATA transcription factor 12-like [Glycine max]
          Length = 366

 Score =  176 bits (445), Expect = 9e-42
 Identities = 89/170 (52%), Positives = 111/170 (65%), Gaps = 12/170 (7%)
 Frame = +1

Query: 328 DTKPGDHFIIEDLLDFSNEDIAIGDGTFDNITGXXXXXXXXXXXXXXXXXYSGSEPHFTG 507
           D    DHFI+EDLLDFSN+D+ I D TFD+IT                  +SGS+P+   
Sbjct: 16  DNNNSDHFIVEDLLDFSNDDVVITDATFDSIT-TDSSTVTTTVHSCNSSSFSGSDPNTVP 74

Query: 508 DMACHSLPDAQFSGELCVPYDDLAELEWLSNFVEDSFSSDDLQKLQLISGMKARTNEVSE 687
           D+   +L D  FS +LCVPYDD+AELEWLSNFVE+SFSS+DL K+QLISGM A+ N+VSE
Sbjct: 75  DIGSRNLSDGHFSDDLCVPYDDIAELEWLSNFVEESFSSEDLHKMQLISGMNAQNNDVSE 134

Query: 688 THDYQ------------PENNRSNPIFSPDVSVPGKARSKRSRAAPCNWA 801
             ++             PE  R++PIF+ +VSVP KARSKRSR  PCNWA
Sbjct: 135 AREFHYEPTTTRSGSHTPEPTRNSPIFNSEVSVPAKARSKRSRGPPCNWA 184


>ref|XP_003545608.1| PREDICTED: GATA transcription factor 12-like [Glycine max]
          Length = 383

 Score =  168 bits (426), Expect = 1e-39
 Identities = 95/209 (45%), Positives = 123/209 (58%), Gaps = 22/209 (10%)
 Frame = +1

Query: 241 APEFFQNTYNSSSRNGNNSQYTPEKRHSADTKPGDHFIIEDLLDFSNEDIAIGDGTFDNI 420
           +P F Q T++++  N N                 D+FI+EDLLDFSN+D+ I D TFD+I
Sbjct: 7   SPIFPQFTFDTNKNNNNP----------------DNFIVEDLLDFSNDDVVITDATFDSI 50

Query: 421 TGXXXXXXXXXXXXXXXXXYSGSEPHFTGDMACHSLPDAQFSGELCVPYDDLAELEWLSN 600
           T                  +SGS+P+   D+   +L D  FSG+LCVPYDD+AELEWLSN
Sbjct: 51  T-TDSSTVTTVVDSCNSSSFSGSDPNTVPDVGSQNLSDGHFSGDLCVPYDDIAELEWLSN 109

Query: 601 FVEDSFSSDDLQKLQLISGMKARTNEVSETHD--YQP--------------------ENN 714
           FVE+SFSS+DLQ++QLISGM AR  +VSE  +  Y+P                    E  
Sbjct: 110 FVEESFSSEDLQQMQLISGMNARNYDVSEAREFHYEPTTRSGPHTPEPTTKSGGLHYEPT 169

Query: 715 RSNPIFSPDVSVPGKARSKRSRAAPCNWA 801
           R++PIF+ +VSVP KARSKRSR  PCNWA
Sbjct: 170 RNSPIFNSEVSVPAKARSKRSRGPPCNWA 198


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