BLASTX nr result
ID: Coptis25_contig00024730
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00024730
(438 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002271239.1| PREDICTED: NF-X1-type zinc finger protein NF... 135 1e-55
emb|CBI25476.3| unnamed protein product [Vitis vinifera] 135 1e-55
ref|XP_003552843.1| PREDICTED: NF-X1-type zinc finger protein NF... 129 5e-55
ref|XP_004138563.1| PREDICTED: NF-X1-type zinc finger protein NF... 129 1e-53
ref|XP_004172842.1| PREDICTED: LOW QUALITY PROTEIN: NF-X1-type z... 129 1e-53
>ref|XP_002271239.1| PREDICTED: NF-X1-type zinc finger protein NFXL2 [Vitis vinifera]
Length = 875
Score = 135 bits (341), Expect(2) = 1e-55
Identities = 55/70 (78%), Positives = 61/70 (87%)
Frame = +3
Query: 3 QGKRTCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKS 182
QG+RTC CGK+ YEGMACD P CG+TCDKMLSCGFH CPERCHRG C+ETCRTVV+K
Sbjct: 314 QGRRTCPCGKRVYEGMACDVSVPLCGATCDKMLSCGFHSCPERCHRGQCIETCRTVVIKG 373
Query: 183 CRCGSLKKEL 212
CRCGSLKKE+
Sbjct: 374 CRCGSLKKEV 383
Score = 106 bits (264), Expect(2) = 1e-55
Identities = 46/75 (61%), Positives = 50/75 (66%)
Frame = +2
Query: 212 LVCERKCQTVXXXXXXXXXXXXXXXXXXXXSEICGRKLRCNNHKCPSPCHRGACAPCPLM 391
L CERKCQ V SEICG++LRC NHKCPSPCHRG CAPCP+M
Sbjct: 389 LACERKCQKVRDCGRHACKRRCCDGDCPPCSEICGKRLRCKNHKCPSPCHRGPCAPCPVM 448
Query: 392 VTISCACGETRFEVP 436
VTISC+CGET FEVP
Sbjct: 449 VTISCSCGETHFEVP 463
Score = 52.0 bits (123), Expect(2) = 2e-13
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +3
Query: 18 CSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKSCRCGS 197
C CG + + C +C + C K+L CG HRC + CH G C C+ + C+CG
Sbjct: 213 CFCGSVE-DVQRCGFKKFSCKNICSKLLDCGIHRCSDTCHDGPC-PPCQARSVYRCQCGE 270
Query: 198 LKKE 209
+++E
Sbjct: 271 IEEE 274
Score = 48.1 bits (113), Expect(2) = 2e-13
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +2
Query: 311 CGRKLRCNNHKCPSPCHRGACAPCPLMVTISCACGETRFE 430
CGR L C H C CH G C CPL +C CG+ +E
Sbjct: 288 CGRVLGCGKHACSKGCHSGECGQCPLQGRRTCPCGKRVYE 327
Score = 58.2 bits (139), Expect(2) = 9e-10
Identities = 25/63 (39%), Positives = 30/63 (47%)
Frame = +3
Query: 24 CGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKSCRCGSLK 203
CG+ + CD P C C K L C H+CP CHRG C C +V SC CG
Sbjct: 401 CGRHACKRRCCDGDCPPCSEICGKRLRCKNHKCPSPCHRGPCA-PCPVMVTISCSCGETH 459
Query: 204 KEL 212
E+
Sbjct: 460 FEV 462
Score = 29.6 bits (65), Expect(2) = 9e-10
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 308 ICGRKLRCNNHKCPSPCHRGACAPCPLMVTISCACG 415
+C C H+C H GAC PC L+ CG
Sbjct: 484 LCKHGSDCKPHRC----HYGACPPCRLLCEEEFPCG 515
>emb|CBI25476.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 135 bits (341), Expect(2) = 1e-55
Identities = 55/70 (78%), Positives = 61/70 (87%)
Frame = +3
Query: 3 QGKRTCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKS 182
QG+RTC CGK+ YEGMACD P CG+TCDKMLSCGFH CPERCHRG C+ETCRTVV+K
Sbjct: 36 QGRRTCPCGKRVYEGMACDVSVPLCGATCDKMLSCGFHSCPERCHRGQCIETCRTVVIKG 95
Query: 183 CRCGSLKKEL 212
CRCGSLKKE+
Sbjct: 96 CRCGSLKKEV 105
Score = 106 bits (264), Expect(2) = 1e-55
Identities = 46/75 (61%), Positives = 50/75 (66%)
Frame = +2
Query: 212 LVCERKCQTVXXXXXXXXXXXXXXXXXXXXSEICGRKLRCNNHKCPSPCHRGACAPCPLM 391
L CERKCQ V SEICG++LRC NHKCPSPCHRG CAPCP+M
Sbjct: 111 LACERKCQKVRDCGRHACKRRCCDGDCPPCSEICGKRLRCKNHKCPSPCHRGPCAPCPVM 170
Query: 392 VTISCACGETRFEVP 436
VTISC+CGET FEVP
Sbjct: 171 VTISCSCGETHFEVP 185
Score = 58.2 bits (139), Expect(2) = 9e-10
Identities = 25/63 (39%), Positives = 30/63 (47%)
Frame = +3
Query: 24 CGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKSCRCGSLK 203
CG+ + CD P C C K L C H+CP CHRG C C +V SC CG
Sbjct: 123 CGRHACKRRCCDGDCPPCSEICGKRLRCKNHKCPSPCHRGPCA-PCPVMVTISCSCGETH 181
Query: 204 KEL 212
E+
Sbjct: 182 FEV 184
Score = 29.6 bits (65), Expect(2) = 9e-10
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 308 ICGRKLRCNNHKCPSPCHRGACAPCPLMVTISCACG 415
+C C H+C H GAC PC L+ CG
Sbjct: 206 LCKHGSDCKPHRC----HYGACPPCRLLCEEEFPCG 237
>ref|XP_003552843.1| PREDICTED: NF-X1-type zinc finger protein NFXL2-like [Glycine max]
Length = 877
Score = 129 bits (323), Expect(2) = 5e-55
Identities = 53/70 (75%), Positives = 59/70 (84%)
Frame = +3
Query: 3 QGKRTCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKS 182
+GKRTC CGK+ YEGM CDA CG+TCDKML CG+HRCPERCHRG CVETCR VV KS
Sbjct: 323 KGKRTCPCGKRVYEGMPCDAPLQLCGATCDKMLPCGYHRCPERCHRGQCVETCRVVVKKS 382
Query: 183 CRCGSLKKEL 212
CRCGSLKK++
Sbjct: 383 CRCGSLKKDV 392
Score = 110 bits (276), Expect(2) = 5e-55
Identities = 49/75 (65%), Positives = 51/75 (68%)
Frame = +2
Query: 212 LVCERKCQTVXXXXXXXXXXXXXXXXXXXXSEICGRKLRCNNHKCPSPCHRGACAPCPLM 391
L CERKCQ + SEICGRKLRC NHKCPSPCHRG CAPCP+M
Sbjct: 398 LACERKCQRMRDCGRHACKRRCCDGDCPPCSEICGRKLRCKNHKCPSPCHRGPCAPCPIM 457
Query: 392 VTISCACGETRFEVP 436
VTISCACGETRFEVP
Sbjct: 458 VTISCACGETRFEVP 472
Score = 57.4 bits (137), Expect(2) = 7e-14
Identities = 28/67 (41%), Positives = 36/67 (53%)
Frame = +3
Query: 9 KRTCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKSCR 188
K C CG + + C +C C K L CG HRC E CH G+C CRT + +CR
Sbjct: 219 KVRCFCGCLE-DVRRCGFKEFSCNKPCSKFLDCGVHRCIELCHPGAC-PPCRTRGVYTCR 276
Query: 189 CGSLKKE 209
CG +K+E
Sbjct: 277 CGKVKEE 283
Score = 44.3 bits (103), Expect(2) = 7e-14
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = +2
Query: 311 CGRKLRCNNHKCPSPCHRGACAPCPLMVTISCACGETRFE 430
C ++L C H C CH G C CPL +C CG+ +E
Sbjct: 297 CEKRLGCGKHVCERGCHSGECGECPLKGKRTCPCGKRVYE 336
Score = 50.4 bits (119), Expect(2) = 8e-13
Identities = 26/64 (40%), Positives = 31/64 (48%)
Frame = +3
Query: 3 QGKRTCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKS 182
+G TC CGK K E D C + C+K L CG H C CH G C E C ++
Sbjct: 270 RGVYTCRCGKVKEERECFDR-GFQCENPCEKRLGCGKHVCERGCHSGECGE-CPLKGKRT 327
Query: 183 CRCG 194
C CG
Sbjct: 328 CPCG 331
Score = 47.8 bits (112), Expect(2) = 8e-13
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 311 CGRKLRCNNHKCPSPCHRGACA-PCPLMVTISCACGETRFEVP 436
C + L C H+CP CHRG C C ++V SC CG + +VP
Sbjct: 351 CDKMLPCGYHRCPERCHRGQCVETCRVVVKKSCRCGSLKKDVP 393
Score = 58.5 bits (140), Expect = 5e-07
Identities = 25/68 (36%), Positives = 33/68 (48%)
Frame = +3
Query: 9 KRTCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKSCR 188
+R CG+ + CD P C C + L C H+CP CHRG C C +V SC
Sbjct: 405 QRMRDCGRHACKRRCCDGDCPPCSEICGRKLRCKNHKCPSPCHRGPCA-PCPIMVTISCA 463
Query: 189 CGSLKKEL 212
CG + E+
Sbjct: 464 CGETRFEV 471
>ref|XP_004138563.1| PREDICTED: NF-X1-type zinc finger protein NFXL2-like [Cucumis
sativus]
Length = 870
Score = 129 bits (325), Expect(2) = 1e-53
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = +3
Query: 3 QGKRTCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKS 182
+GKRTC CGKK YEGM CD P CG+TCDKML+CG HRCPERCHRG C+ TCR VV KS
Sbjct: 309 KGKRTCPCGKKAYEGMPCDVAVPLCGATCDKMLACGLHRCPERCHRGPCIGTCRIVVFKS 368
Query: 183 CRCGSLKKEL 212
CRCGSL+KE+
Sbjct: 369 CRCGSLRKEI 378
Score = 105 bits (262), Expect(2) = 1e-53
Identities = 46/75 (61%), Positives = 49/75 (65%)
Frame = +2
Query: 212 LVCERKCQTVXXXXXXXXXXXXXXXXXXXXSEICGRKLRCNNHKCPSPCHRGACAPCPLM 391
L CERKC + SEICGR+LRC NHKCPSPCHRG CAPCP+M
Sbjct: 384 LACERKCNRMRDCGRHACRRRCCDGDCPPCSEICGRRLRCKNHKCPSPCHRGPCAPCPVM 443
Query: 392 VTISCACGETRFEVP 436
VTISCACGET FEVP
Sbjct: 444 VTISCACGETHFEVP 458
Score = 49.7 bits (117), Expect(2) = 1e-12
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 311 CGRKLRCNNHKCPSPCHRGAC-APCPLMVTISCACGETRFEVP 436
C + L C H+CP CHRG C C ++V SC CG R E+P
Sbjct: 337 CDKMLACGLHRCPERCHRGPCIGTCRIVVFKSCRCGSLRKEIP 379
Score = 48.1 bits (113), Expect(2) = 1e-12
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = +3
Query: 3 QGKRTCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKS 182
QG C CGK + E C + C C+K+L CG H C + CH G C + C ++
Sbjct: 256 QGVFKCQCGKTE-EKRECWDRSFRCEDECNKLLGCGKHSCNKGCHSGECGQ-CPFKGKRT 313
Query: 183 CRCG 194
C CG
Sbjct: 314 CPCG 317
Score = 53.1 bits (126), Expect(2) = 2e-12
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 15 TCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKSCRCG 194
+C CG + + C +C + C K+L CG H+C E CH GSC CR + C+CG
Sbjct: 207 SCYCGSVR-DARRCGFKNFSCNNVCSKVLDCGRHKCAEICHEGSC-PPCRIQGVFKCQCG 264
Query: 195 SLKKE 209
+++
Sbjct: 265 KTEEK 269
Score = 43.5 bits (101), Expect(2) = 2e-12
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 311 CGRKLRCNNHKCPSPCHRGACAPCPLMVTISCACGETRFE 430
C + L C H C CH G C CP +C CG+ +E
Sbjct: 283 CNKLLGCGKHSCNKGCHSGECGQCPFKGKRTCPCGKKAYE 322
Score = 49.3 bits (116), Expect(2) = 6e-11
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 302 SEICGRKLRCNNHKCPSPCHRGACAPCPLMVTISCACGET 421
+ +C + L C HKC CH G+C PC + C CG+T
Sbjct: 227 NNVCSKVLDCGRHKCAEICHEGSCPPCRIQGVFKCQCGKT 266
Score = 42.4 bits (98), Expect(2) = 6e-11
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 18 CSCGKKKYEGMACDAVAP-TCGSTCDKML--SCGFHRCPERCHRGSCVETCRTVVMKSCR 188
C CGK + + P +CG C + L +CG H C CH G C +C +V SC
Sbjct: 152 CFCGKLENPPSDDPWILPHSCGEVCGRPLKHNCG-HHCLLLCHPGPC-PSCPKIVQASCY 209
Query: 189 CGSLK 203
CGS++
Sbjct: 210 CGSVR 214
Score = 57.0 bits (136), Expect(2) = 1e-09
Identities = 25/67 (37%), Positives = 30/67 (44%)
Frame = +3
Query: 12 RTCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKSCRC 191
R CG+ CD P C C + L C H+CP CHRG C C +V SC C
Sbjct: 392 RMRDCGRHACRRRCCDGDCPPCSEICGRRLRCKNHKCPSPCHRGPCA-PCPVMVTISCAC 450
Query: 192 GSLKKEL 212
G E+
Sbjct: 451 GETHFEV 457
Score = 30.4 bits (67), Expect(2) = 1e-09
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 302 SEICGRKLRCNNHKCPSPCHRGACAPCPLMVTISCACG 415
S +C +L HKC H GAC PC + +CG
Sbjct: 477 SPLCNHRLSQKPHKC----HYGACPPCRRICEEEYSCG 510
>ref|XP_004172842.1| PREDICTED: LOW QUALITY PROTEIN: NF-X1-type zinc finger protein
NFXL2-like, partial [Cucumis sativus]
Length = 628
Score = 129 bits (325), Expect(2) = 1e-53
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = +3
Query: 3 QGKRTCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKS 182
+GKRTC CGKK YEGM CD P CG+TCDKML+CG HRCPERCHRG C+ TCR VV KS
Sbjct: 309 KGKRTCPCGKKAYEGMPCDVAVPLCGATCDKMLACGLHRCPERCHRGPCIGTCRIVVFKS 368
Query: 183 CRCGSLKKEL 212
CRCGSL+KE+
Sbjct: 369 CRCGSLRKEI 378
Score = 105 bits (262), Expect(2) = 1e-53
Identities = 46/75 (61%), Positives = 49/75 (65%)
Frame = +2
Query: 212 LVCERKCQTVXXXXXXXXXXXXXXXXXXXXSEICGRKLRCNNHKCPSPCHRGACAPCPLM 391
L CERKC + SEICGR+LRC NHKCPSPCHRG CAPCP+M
Sbjct: 384 LACERKCNRMRDCGRHACRRRCCDGDCPPCSEICGRRLRCKNHKCPSPCHRGPCAPCPVM 443
Query: 392 VTISCACGETRFEVP 436
VTISCACGET FEVP
Sbjct: 444 VTISCACGETHFEVP 458
Score = 49.7 bits (117), Expect(2) = 1e-12
Identities = 20/43 (46%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +2
Query: 311 CGRKLRCNNHKCPSPCHRGAC-APCPLMVTISCACGETRFEVP 436
C + L C H+CP CHRG C C ++V SC CG R E+P
Sbjct: 337 CDKMLACGLHRCPERCHRGPCIGTCRIVVFKSCRCGSLRKEIP 379
Score = 48.1 bits (113), Expect(2) = 1e-12
Identities = 24/64 (37%), Positives = 32/64 (50%)
Frame = +3
Query: 3 QGKRTCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKS 182
QG C CGK + E C + C C+K+L CG H C + CH G C + C ++
Sbjct: 256 QGVFKCQCGKTE-EKRECWDRSFRCEDECNKLLGCGKHSCNKGCHSGECGQ-CPFKGKRT 313
Query: 183 CRCG 194
C CG
Sbjct: 314 CPCG 317
Score = 53.1 bits (126), Expect(2) = 2e-12
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 15 TCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKSCRCG 194
+C CG + + C +C + C K+L CG H+C E CH GSC CR + C+CG
Sbjct: 207 SCYCGSVR-DARRCGFKNFSCNNVCSKVLDCGRHKCAEICHEGSC-PPCRIQGVFKCQCG 264
Query: 195 SLKKE 209
+++
Sbjct: 265 KTEEK 269
Score = 43.5 bits (101), Expect(2) = 2e-12
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 311 CGRKLRCNNHKCPSPCHRGACAPCPLMVTISCACGETRFE 430
C + L C H C CH G C CP +C CG+ +E
Sbjct: 283 CNKLLGCGKHSCNKGCHSGECGQCPFKGKRTCPCGKKAYE 322
Score = 49.3 bits (116), Expect(2) = 6e-11
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +2
Query: 302 SEICGRKLRCNNHKCPSPCHRGACAPCPLMVTISCACGET 421
+ +C + L C HKC CH G+C PC + C CG+T
Sbjct: 227 NNVCSKVLDCGRHKCAEICHEGSCPPCRIQGVFKCQCGKT 266
Score = 42.4 bits (98), Expect(2) = 6e-11
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +3
Query: 18 CSCGKKKYEGMACDAVAP-TCGSTCDKML--SCGFHRCPERCHRGSCVETCRTVVMKSCR 188
C CGK + + P +CG C + L +CG H C CH G C +C +V SC
Sbjct: 152 CFCGKLENPPSDDPWILPHSCGEVCGRPLKHNCG-HHCLLLCHPGPC-PSCPKIVQASCY 209
Query: 189 CGSLK 203
CGS++
Sbjct: 210 CGSVR 214
Score = 57.0 bits (136), Expect(2) = 1e-09
Identities = 25/67 (37%), Positives = 30/67 (44%)
Frame = +3
Query: 12 RTCSCGKKKYEGMACDAVAPTCGSTCDKMLSCGFHRCPERCHRGSCVETCRTVVMKSCRC 191
R CG+ CD P C C + L C H+CP CHRG C C +V SC C
Sbjct: 392 RMRDCGRHACRRRCCDGDCPPCSEICGRRLRCKNHKCPSPCHRGPCA-PCPVMVTISCAC 450
Query: 192 GSLKKEL 212
G E+
Sbjct: 451 GETHFEV 457
Score = 30.4 bits (67), Expect(2) = 1e-09
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +2
Query: 302 SEICGRKLRCNNHKCPSPCHRGACAPCPLMVTISCACG 415
S +C +L HKC H GAC PC + +CG
Sbjct: 477 SPLCNHRLSQKPHKC----HYGACPPCRRICEEEYSCG 510