BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024717
         (1128 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22168.3| unnamed protein product [Vitis vinifera]              530   e-148
ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, ...   530   e-148
ref|XP_002517483.1| GTP-binding protein lepA, putative [Ricinus ...   518   e-144
ref|XP_002323840.1| predicted protein [Populus trichocarpa] gi|2...   508   e-141
ref|NP_001056783.1| Os06g0144800 [Oryza sativa Japonica Group] g...   504   e-140

>emb|CBI22168.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  530 bits (1365), Expect = e-148
 Identities = 266/312 (85%), Positives = 282/312 (90%)
 Frame = -3

Query: 1126 GFKPAKHMVFSGVYPADGSDFEALNHAIERLTCNDASVSVAKESSTAXXXXXXXXXXXXL 947
            GFKPAKHMVFSG+YPADGSDFEALNHAIERLTCNDASVSV KESSTA            L
Sbjct: 205  GFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSVTKESSTALGLGFRCGFLGLL 264

Query: 946  HMDVFHQRLEQEHGARVISTTPTVPYIFEFSDGSKVQVQNPAALALTPGKRVTACWEPTV 767
            HMDVFHQRLEQE+GA +IST PTVPYIFE+SDGSK+QVQNPAALA  PGKRVTACWEPTV
Sbjct: 265  HMDVFHQRLEQEYGAHIISTVPTVPYIFEYSDGSKIQVQNPAALASNPGKRVTACWEPTV 324

Query: 766  MATIIIPSEYVGPVITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREIVVDFYNELKSITS 587
            +ATIIIPSEYVGPVITLCS+RRG+QLEYSFIDSQRAFMKYR+PLREIVVDFYNELKSITS
Sbjct: 325  IATIIIPSEYVGPVITLCSERRGEQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSITS 384

Query: 586  GYASFDYEDADYQTSDLVKLDILLNGQPVDAMATIVHNLKAQRIGREMVDKLKKFIDRQM 407
            GYASFDYEDA+YQ SDLVKLDILLNGQPVDAMATIVHNLKAQR+GRE+V+KLKKFIDRQM
Sbjct: 385  GYASFDYEDAEYQASDLVKLDILLNGQPVDAMATIVHNLKAQRVGRELVEKLKKFIDRQM 444

Query: 406  FEXXXXXXXXXXXXARETLSAMRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDV 227
            FE            ARET+SAMRKNVLAKCYGGDV+RKRKLLEKQKEGKKRMKRVGSVD+
Sbjct: 445  FEIVIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDI 504

Query: 226  PQEAFHELLKVS 191
            PQEAFHELLKVS
Sbjct: 505  PQEAFHELLKVS 516


>ref|XP_002277245.1| PREDICTED: translation factor GUF1 homolog, mitochondrial [Vitis
            vinifera]
          Length = 681

 Score =  530 bits (1365), Expect = e-148
 Identities = 266/312 (85%), Positives = 282/312 (90%)
 Frame = -3

Query: 1126 GFKPAKHMVFSGVYPADGSDFEALNHAIERLTCNDASVSVAKESSTAXXXXXXXXXXXXL 947
            GFKPAKHMVFSG+YPADGSDFEALNHAIERLTCNDASVSV KESSTA            L
Sbjct: 370  GFKPAKHMVFSGLYPADGSDFEALNHAIERLTCNDASVSVTKESSTALGLGFRCGFLGLL 429

Query: 946  HMDVFHQRLEQEHGARVISTTPTVPYIFEFSDGSKVQVQNPAALALTPGKRVTACWEPTV 767
            HMDVFHQRLEQE+GA +IST PTVPYIFE+SDGSK+QVQNPAALA  PGKRVTACWEPTV
Sbjct: 430  HMDVFHQRLEQEYGAHIISTVPTVPYIFEYSDGSKIQVQNPAALASNPGKRVTACWEPTV 489

Query: 766  MATIIIPSEYVGPVITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREIVVDFYNELKSITS 587
            +ATIIIPSEYVGPVITLCS+RRG+QLEYSFIDSQRAFMKYR+PLREIVVDFYNELKSITS
Sbjct: 490  IATIIIPSEYVGPVITLCSERRGEQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSITS 549

Query: 586  GYASFDYEDADYQTSDLVKLDILLNGQPVDAMATIVHNLKAQRIGREMVDKLKKFIDRQM 407
            GYASFDYEDA+YQ SDLVKLDILLNGQPVDAMATIVHNLKAQR+GRE+V+KLKKFIDRQM
Sbjct: 550  GYASFDYEDAEYQASDLVKLDILLNGQPVDAMATIVHNLKAQRVGRELVEKLKKFIDRQM 609

Query: 406  FEXXXXXXXXXXXXARETLSAMRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDV 227
            FE            ARET+SAMRKNVLAKCYGGDV+RKRKLLEKQKEGKKRMKRVGSVD+
Sbjct: 610  FEIVIQAAIGSKIIARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDI 669

Query: 226  PQEAFHELLKVS 191
            PQEAFHELLKVS
Sbjct: 670  PQEAFHELLKVS 681


>ref|XP_002517483.1| GTP-binding protein lepA, putative [Ricinus communis]
            gi|317411652|sp|B9RUN8.1|GUF1_RICCO RecName:
            Full=Translation factor GUF1 homolog, mitochondrial;
            AltName: Full=Elongation factor 4 homolog; Short=EF-4;
            AltName: Full=GTPase GUF1 homolog; AltName:
            Full=Ribosomal back-translocase; Flags: Precursor
            gi|223543494|gb|EEF45025.1| GTP-binding protein lepA,
            putative [Ricinus communis]
          Length = 673

 Score =  518 bits (1333), Expect = e-144
 Identities = 262/312 (83%), Positives = 279/312 (89%)
 Frame = -3

Query: 1126 GFKPAKHMVFSGVYPADGSDFEALNHAIERLTCNDASVSVAKESSTAXXXXXXXXXXXXL 947
            GFKPAKHMVFSG+YPADGSDF+ALNHAIERLTCNDASVSV KESS+A            L
Sbjct: 362  GFKPAKHMVFSGLYPADGSDFDALNHAIERLTCNDASVSVTKESSSALGLGFRCGFLGLL 421

Query: 946  HMDVFHQRLEQEHGARVISTTPTVPYIFEFSDGSKVQVQNPAALALTPGKRVTACWEPTV 767
            HMDVFHQRLEQE+GA VIST PTVPYIFE+SDGSKVQVQNPAAL   P KRVTA WEPTV
Sbjct: 422  HMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGSKVQVQNPAALPSNPKKRVTASWEPTV 481

Query: 766  MATIIIPSEYVGPVITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREIVVDFYNELKSITS 587
            +ATIIIPSEYVGPVITLCS+RRGQQLEYSFIDSQRAFMKYR+PLREIVVDFYNELKSITS
Sbjct: 482  VATIIIPSEYVGPVITLCSERRGQQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSITS 541

Query: 586  GYASFDYEDADYQTSDLVKLDILLNGQPVDAMATIVHNLKAQRIGREMVDKLKKFIDRQM 407
            GYASFDYED++YQ ++LVKLDILLNGQPVDAMATIVHNLKAQR+GRE+VDKLKKFIDRQM
Sbjct: 542  GYASFDYEDSEYQEAELVKLDILLNGQPVDAMATIVHNLKAQRVGRELVDKLKKFIDRQM 601

Query: 406  FEXXXXXXXXXXXXARETLSAMRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDV 227
            FE            ARET+SAMRKNVLAKCYGGDV+RKRKLLEKQKEGKKRMKRVGSVD+
Sbjct: 602  FEITIQAAIGSKVVARETISAMRKNVLAKCYGGDVTRKRKLLEKQKEGKKRMKRVGSVDI 661

Query: 226  PQEAFHELLKVS 191
            PQEAFHELLKVS
Sbjct: 662  PQEAFHELLKVS 673


>ref|XP_002323840.1| predicted protein [Populus trichocarpa] gi|222866842|gb|EEF03973.1|
            predicted protein [Populus trichocarpa]
          Length = 611

 Score =  508 bits (1308), Expect = e-141
 Identities = 255/310 (82%), Positives = 273/310 (88%)
 Frame = -3

Query: 1126 GFKPAKHMVFSGVYPADGSDFEALNHAIERLTCNDASVSVAKESSTAXXXXXXXXXXXXL 947
            GFKPAKHMVFSG+YP DGSDF+ALNHAIERLTCNDASVSV KESS+A            L
Sbjct: 302  GFKPAKHMVFSGLYPVDGSDFDALNHAIERLTCNDASVSVTKESSSALGLGFRCGFLGLL 361

Query: 946  HMDVFHQRLEQEHGARVISTTPTVPYIFEFSDGSKVQVQNPAALALTPGKRVTACWEPTV 767
            HMDVFHQRLEQEHGA VIST PTVPYIFE+SDGSKVQVQNPA L   P KRVTA WEPTV
Sbjct: 362  HMDVFHQRLEQEHGAHVISTVPTVPYIFEYSDGSKVQVQNPAMLTSNPNKRVTASWEPTV 421

Query: 766  MATIIIPSEYVGPVITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREIVVDFYNELKSITS 587
            +ATIIIPSEYVGPVITLCS+RRGQQLEYSF+DSQRAFMKYR+PLREIVVDFYNELKSITS
Sbjct: 422  IATIIIPSEYVGPVITLCSERRGQQLEYSFVDSQRAFMKYRLPLREIVVDFYNELKSITS 481

Query: 586  GYASFDYEDADYQTSDLVKLDILLNGQPVDAMATIVHNLKAQRIGREMVDKLKKFIDRQM 407
            GYASFDYED+DYQ SDLVKLDI+LNGQ VDAMATIVH LKAQRIGRE+V+KLKKFIDRQM
Sbjct: 482  GYASFDYEDSDYQESDLVKLDIVLNGQSVDAMATIVHKLKAQRIGRELVEKLKKFIDRQM 541

Query: 406  FEXXXXXXXXXXXXARETLSAMRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDV 227
            FE            ARET+SAMRKNVLAKCYGGDV+RK+KLLEKQKEGKKRMKR+GSVD+
Sbjct: 542  FEITIQAAIGAKVFARETISAMRKNVLAKCYGGDVTRKKKLLEKQKEGKKRMKRIGSVDI 601

Query: 226  PQEAFHELLK 197
            PQEAFHELL+
Sbjct: 602  PQEAFHELLR 611


>ref|NP_001056783.1| Os06g0144800 [Oryza sativa Japonica Group]
            gi|75109937|sp|Q5VQ69.1|GUF1_ORYSJ RecName:
            Full=Translation factor GUF1 homolog, mitochondrial;
            AltName: Full=Elongation factor 4 homolog; Short=EF-4;
            AltName: Full=GTPase GUF1 homolog; AltName:
            Full=Ribosomal back-translocase; Flags: Precursor
            gi|55296361|dbj|BAD68406.1| putative GTP-binding membrane
            protein LepA [Oryza sativa Japonica Group]
            gi|113594823|dbj|BAF18697.1| Os06g0144800 [Oryza sativa
            Japonica Group] gi|222634942|gb|EEE65074.1| hypothetical
            protein OsJ_20104 [Oryza sativa Japonica Group]
          Length = 663

 Score =  504 bits (1298), Expect = e-140
 Identities = 248/312 (79%), Positives = 277/312 (88%)
 Frame = -3

Query: 1126 GFKPAKHMVFSGVYPADGSDFEALNHAIERLTCNDASVSVAKESSTAXXXXXXXXXXXXL 947
            GFKPA+HMVFSG+YPADGSDF+AL+HAIE+LTCNDASVSV KE+STA            L
Sbjct: 349  GFKPARHMVFSGLYPADGSDFDALSHAIEKLTCNDASVSVTKETSTALGMGFRCGFLGLL 408

Query: 946  HMDVFHQRLEQEHGARVISTTPTVPYIFEFSDGSKVQVQNPAALALTPGKRVTACWEPTV 767
            HMDVFHQRLEQEHGA+VIST PTVPYIFE+ DGSKVQV+NPAALA  PGKR+ ACWEPTV
Sbjct: 409  HMDVFHQRLEQEHGAQVISTIPTVPYIFEYGDGSKVQVENPAALASNPGKRIAACWEPTV 468

Query: 766  MATIIIPSEYVGPVITLCSDRRGQQLEYSFIDSQRAFMKYRIPLREIVVDFYNELKSITS 587
            +ATIIIPSEYVGPVI LCS+RRG+Q EY+FID+QRA +KYR+PLREI+VDFYNELKSITS
Sbjct: 469  IATIIIPSEYVGPVIMLCSERRGEQQEYTFIDAQRALLKYRLPLREIIVDFYNELKSITS 528

Query: 586  GYASFDYEDADYQTSDLVKLDILLNGQPVDAMATIVHNLKAQRIGREMVDKLKKFIDRQM 407
            GYA+FDYED++YQ SDLVK+DILLNGQPVDAMATIVHN KAQR+GRE+VDKLKKFI+RQM
Sbjct: 529  GYATFDYEDSEYQQSDLVKMDILLNGQPVDAMATIVHNQKAQRVGRELVDKLKKFIERQM 588

Query: 406  FEXXXXXXXXXXXXARETLSAMRKNVLAKCYGGDVSRKRKLLEKQKEGKKRMKRVGSVDV 227
            FE            ARETLSAMRKNVLAKCYGGD++RK+KLLEKQKEGKKRMKRVGSVD+
Sbjct: 589  FEITIQAAVGSKVIARETLSAMRKNVLAKCYGGDITRKKKLLEKQKEGKKRMKRVGSVDI 648

Query: 226  PQEAFHELLKVS 191
            PQEAFHELLKVS
Sbjct: 649  PQEAFHELLKVS 660