BLASTX nr result
ID: Coptis25_contig00024703
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024703 (935 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002514918.1| protein with unknown function [Ricinus commu... 97 7e-18 tpg|DAA40482.1| TPA: putative protein kinase superfamily protein... 96 1e-17 ref|XP_003578389.1| PREDICTED: uncharacterized protein LOC100842... 94 4e-17 gb|AFP73615.1| asynapsis 1 [Hordeum vulgare subsp. vulgare] 92 1e-16 ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus... 69 2e-16 >ref|XP_002514918.1| protein with unknown function [Ricinus communis] gi|223545969|gb|EEF47472.1| protein with unknown function [Ricinus communis] Length = 613 Score = 96.7 bits (239), Expect = 7e-18 Identities = 53/75 (70%), Positives = 59/75 (78%), Gaps = 4/75 (5%) Frame = -1 Query: 470 ALYHALPMDYVTV----TKLDAEASQTTVRKLIDKMEQDGYLEGVNN*RLGKRVVVHSES 303 ALYHALPM+YVTV TKLD EA+QTTVRKLIDKM +DGYLE N RLGKR V+HS Sbjct: 402 ALYHALPMNYVTVAKLQTKLDGEANQTTVRKLIDKMTRDGYLEAKGNRRLGKR-VIHSIQ 460 Query: 302 TNKKLLEVKKALGDN 258 T KKL E+KK LG+N Sbjct: 461 TEKKLAELKKILGNN 475 >tpg|DAA40482.1| TPA: putative protein kinase superfamily protein [Zea mays] Length = 881 Score = 95.9 bits (237), Expect = 1e-17 Identities = 55/82 (67%), Positives = 62/82 (75%), Gaps = 4/82 (4%) Frame = -1 Query: 470 ALYHALPMDYVTVTKL----DAEASQTTVRKLIDKMEQDGYLEGVNN*RLGKRVVVHSES 303 ALYHALPMDYVT+ KL D EASQ TVRKLIDKM QDGY++ N RLGK V+HSES Sbjct: 671 ALYHALPMDYVTIAKLQGKLDGEASQNTVRKLIDKMVQDGYVKNSANRRLGK-AVIHSES 729 Query: 302 TNKKLLEVKKALGDNPSGLKMS 237 TNK+LLE+KK L N G KM+ Sbjct: 730 TNKRLLEIKKILEVN-EGEKMA 750 >ref|XP_003578389.1| PREDICTED: uncharacterized protein LOC100842600 [Brachypodium distachyon] Length = 602 Score = 94.4 bits (233), Expect = 4e-17 Identities = 50/75 (66%), Positives = 59/75 (78%), Gaps = 4/75 (5%) Frame = -1 Query: 470 ALYHALPMDYVTVTKL----DAEASQTTVRKLIDKMEQDGYLEGVNN*RLGKRVVVHSES 303 ALYHALPMDYVT+ KL D EA+Q TVRKLIDKM QDGY++ +N RLGK V+HSE+ Sbjct: 395 ALYHALPMDYVTIAKLQGKLDGEANQNTVRKLIDKMVQDGYIKNSSNRRLGK-AVIHSEA 453 Query: 302 TNKKLLEVKKALGDN 258 TN+KLLE+KK L N Sbjct: 454 TNRKLLEIKKILEVN 468 >gb|AFP73615.1| asynapsis 1 [Hordeum vulgare subsp. vulgare] Length = 592 Score = 92.4 bits (228), Expect = 1e-16 Identities = 50/72 (69%), Positives = 57/72 (79%), Gaps = 4/72 (5%) Frame = -1 Query: 470 ALYHALPMDYVTVTKL----DAEASQTTVRKLIDKMEQDGYLEGVNN*RLGKRVVVHSES 303 ALYHALPMDYVTV KL D EA+Q+TVRKLIDKM QDGY++ N RLGK V+HSE Sbjct: 395 ALYHALPMDYVTVAKLQGKLDGEANQSTVRKLIDKMVQDGYIKNSANRRLGK-AVIHSEV 453 Query: 302 TNKKLLEVKKAL 267 TN+KLLE+KK L Sbjct: 454 TNRKLLEIKKIL 465 >ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus communis] gi|223541763|gb|EEF43311.1| multidrug resistance pump, putative [Ricinus communis] Length = 496 Score = 68.9 bits (167), Expect(2) = 2e-16 Identities = 29/42 (69%), Positives = 33/42 (78%) Frame = -1 Query: 209 HGVAVGAGWQFLVAFINDVCYYVIGLPIATLLGYKFNFGVQG 84 HGVAVGAGWQ VA IN CYY++GLPI +LGYKF GV+G Sbjct: 399 HGVAVGAGWQLSVALINIACYYIVGLPIGAVLGYKFKLGVKG 440 Score = 43.5 bits (101), Expect(2) = 2e-16 Identities = 17/29 (58%), Positives = 23/29 (79%) Frame = -3 Query: 87 GIWSGLLIGVLMQTVIMLAILFRTNWQKE 1 GIWSG+L G ++Q VI++ I+ RTNW KE Sbjct: 440 GIWSGMLAGCVLQIVILIFIMLRTNWNKE 468