BLASTX nr result
ID: Coptis25_contig00024701
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024701 (310 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003619324.1| Resistance protein [Medicago truncatula] gi|... 59 9e-09 ref|XP_003619322.1| NBS resistance protein [Medicago truncatula]... 57 3e-08 ref|XP_002301715.1| predicted protein [Populus trichocarpa] gi|2... 56 7e-08 gb|ADB43255.1| blight resistance protein [Capsicum annuum] 53 2e-07 ref|XP_003601846.1| Nucleotide binding site leucine-rich repeat ... 49 3e-07 >ref|XP_003619324.1| Resistance protein [Medicago truncatula] gi|355494339|gb|AES75542.1| Resistance protein [Medicago truncatula] Length = 1120 Score = 58.9 bits (141), Expect(2) = 9e-09 Identities = 29/49 (59%), Positives = 35/49 (71%) Frame = -2 Query: 213 FPDLPCLPEWIQFLPALRELRVSWCHALKSRCPKDTGED*HKIAHIPRI 67 FP L LP+ Q L L+ELR+S C L +RC K+TGED HKIAHIPR+ Sbjct: 1027 FPMLTSLPDSFQELINLKELRISNCPMLMNRCKKETGEDWHKIAHIPRL 1075 Score = 25.4 bits (54), Expect(2) = 9e-09 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -3 Query: 308 LPALKFLTIIAFITLPEWLQNFTSLQVLQI 219 L L+ + +LP+WL TSLQ L+I Sbjct: 995 LQNLQLYDCSSLASLPQWLGAMTSLQTLEI 1024 >ref|XP_003619322.1| NBS resistance protein [Medicago truncatula] gi|355494337|gb|AES75540.1| NBS resistance protein [Medicago truncatula] Length = 620 Score = 57.4 bits (137), Expect(2) = 3e-08 Identities = 28/49 (57%), Positives = 34/49 (69%) Frame = -2 Query: 213 FPDLPCLPEWIQFLPALRELRVSWCHALKSRCPKDTGED*HKIAHIPRI 67 FP L LP + L L+ELR+S C L +RC K+TGED HKIAHIPR+ Sbjct: 564 FPKLTSLPNSFKELINLKELRISNCPMLMNRCKKETGEDWHKIAHIPRL 612 Score = 25.0 bits (53), Expect(2) = 3e-08 Identities = 13/33 (39%), Positives = 17/33 (51%) Frame = -3 Query: 308 LPALKFLTIIAFITLPEWLQNFTSLQVLQICDF 210 L L+ + +LP WL TSLQ L+I F Sbjct: 532 LQNLQLYDCSSLASLPHWLGAMTSLQTLEIKRF 564 >ref|XP_002301715.1| predicted protein [Populus trichocarpa] gi|222843441|gb|EEE80988.1| predicted protein [Populus trichocarpa] Length = 626 Score = 56.2 bits (134), Expect(2) = 7e-08 Identities = 26/56 (46%), Positives = 38/56 (67%) Frame = -2 Query: 210 PDLPCLPEWIQFLPALRELRVSWCHALKSRCPKDTGED*HKIAHIPRIIVNLIQIQ 43 PDL LP+ ++ L L++L + C L+ RC K+TGED IAHIP+I++N +IQ Sbjct: 564 PDLMSLPDGVKRLNMLKQLEIEECPNLERRCKKETGEDWLNIAHIPKIVINSEEIQ 619 Score = 25.0 bits (53), Expect(2) = 7e-08 Identities = 10/19 (52%), Positives = 15/19 (78%) Frame = -3 Query: 269 TLPEWLQNFTSLQVLQICD 213 +LP+ +Q+ TSL+ L ICD Sbjct: 520 SLPQSIQHLTSLRSLTICD 538 >gb|ADB43255.1| blight resistance protein [Capsicum annuum] Length = 994 Score = 53.1 bits (126), Expect(2) = 2e-07 Identities = 25/48 (52%), Positives = 31/48 (64%) Frame = -2 Query: 204 LPCLPEWIQFLPALRELRVSWCHALKSRCPKDTGED*HKIAHIPRIIV 61 L LPE +Q L AL LRV+ C + RC + TGED HKIAHIP + + Sbjct: 946 LKSLPEALQHLTALTNLRVTGCPEVAKRCERGTGEDWHKIAHIPNVYI 993 Score = 26.6 bits (57), Expect(2) = 2e-07 Identities = 15/41 (36%), Positives = 22/41 (53%) Frame = -3 Query: 308 LPALKFLTIIAFITLPEWLQNFTSLQVLQICDFQICLACQN 186 L LK+L+I F L E + TSL L+ D + C A ++ Sbjct: 883 LANLKYLSISYFENLKELPTSLTSLNDLKCLDIRYCYALES 923 >ref|XP_003601846.1| Nucleotide binding site leucine-rich repeat disease resistance protein [Medicago truncatula] gi|355490894|gb|AES72097.1| Nucleotide binding site leucine-rich repeat disease resistance protein [Medicago truncatula] Length = 1136 Score = 49.3 bits (116), Expect(2) = 3e-07 Identities = 25/54 (46%), Positives = 31/54 (57%) Frame = -2 Query: 213 FPDLPCLPEWIQFLPALRELRVSWCHALKSRCPKDTGED*HKIAHIPRIIVNLI 52 FP L LP+ Q L L+ L + C L+ RC + GED HKIAHIP +N I Sbjct: 1040 FPKLSSLPDNFQQLQNLQRLYIVACPMLEKRCKRGKGEDWHKIAHIPEFELNFI 1093 Score = 29.6 bits (65), Expect(2) = 3e-07 Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 3/36 (8%) Frame = -3 Query: 308 LPALKFLTIIAF---ITLPEWLQNFTSLQVLQICDF 210 +P+L+ L + F +LP+WL TSLQVL I F Sbjct: 1005 IPSLQNLCLFDFPSITSLPDWLGAMTSLQVLHILKF 1040