BLASTX nr result
ID: Coptis25_contig00024700
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024700 (447 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004133703.1| PREDICTED: uncharacterized protein LOC101203... 69 5e-10 ref|XP_003540092.1| PREDICTED: uncharacterized protein LOC100306... 68 7e-10 ref|XP_002335774.1| predicted protein [Populus trichocarpa] gi|2... 68 9e-10 ref|NP_001046198.1| Os02g0197400 [Oryza sativa Japonica Group] g... 67 1e-09 gb|ACG45040.1| hypothetical protein [Zea mays] gi|413936186|gb|A... 67 2e-09 >ref|XP_004133703.1| PREDICTED: uncharacterized protein LOC101203530 [Cucumis sativus] gi|449478162|ref|XP_004155238.1| PREDICTED: uncharacterized protein LOC101231659 [Cucumis sativus] Length = 59 Score = 68.6 bits (166), Expect = 5e-10 Identities = 29/46 (63%), Positives = 38/46 (82%) Frame = -1 Query: 372 GRGVIGEKWSGRFLWLCALGSAVGLWMVGVERQAQNRERMLRAAME 235 GRGVIG+KWS R LW+CALGS +G++MV ERQ QNR+RML +++ Sbjct: 3 GRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLK 48 >ref|XP_003540092.1| PREDICTED: uncharacterized protein LOC100306575 [Glycine max] gi|255628927|gb|ACU14808.1| unknown [Glycine max] Length = 60 Score = 68.2 bits (165), Expect = 7e-10 Identities = 34/50 (68%), Positives = 39/50 (78%), Gaps = 3/50 (6%) Frame = -1 Query: 369 RGVIGEKWSGRFLWLCALGSAVGLWMVGVERQAQNRERMLR---AAMEAG 229 RGVI +KWS R LW CA+GSAV L+MV VERQAQNR+RML AME+G Sbjct: 4 RGVIADKWSMRILWACAIGSAVSLYMVAVERQAQNRQRMLAEELKAMESG 53 >ref|XP_002335774.1| predicted protein [Populus trichocarpa] gi|224128173|ref|XP_002329099.1| predicted protein [Populus trichocarpa] gi|222834723|gb|EEE73186.1| predicted protein [Populus trichocarpa] gi|222869768|gb|EEF06899.1| predicted protein [Populus trichocarpa] Length = 60 Score = 67.8 bits (164), Expect = 9e-10 Identities = 30/46 (65%), Positives = 36/46 (78%) Frame = -1 Query: 372 GRGVIGEKWSGRFLWLCALGSAVGLWMVGVERQAQNRERMLRAAME 235 GRGVIG+KWS R LW CA+GS V L+MV VERQ QNRERM+ ++ Sbjct: 3 GRGVIGDKWSSRVLWACAIGSVVSLYMVVVERQLQNRERMMAEGLK 48 >ref|NP_001046198.1| Os02g0197400 [Oryza sativa Japonica Group] gi|49388155|dbj|BAD25283.1| unknown protein [Oryza sativa Japonica Group] gi|49388340|dbj|BAD25450.1| unknown protein [Oryza sativa Japonica Group] gi|113535729|dbj|BAF08112.1| Os02g0197400 [Oryza sativa Japonica Group] gi|125538481|gb|EAY84876.1| hypothetical protein OsI_06241 [Oryza sativa Indica Group] gi|215769066|dbj|BAH01295.1| unnamed protein product [Oryza sativa Japonica Group] Length = 61 Score = 67.4 bits (163), Expect = 1e-09 Identities = 30/47 (63%), Positives = 37/47 (78%) Frame = -1 Query: 372 GRGVIGEKWSGRFLWLCALGSAVGLWMVGVERQAQNRERMLRAAMEA 232 GRGV+GE+WS R LWLCA+GSAV L+ V VERQAQNR R + ++A Sbjct: 5 GRGVVGERWSQRVLWLCAIGSAVSLYYVAVERQAQNRARAVAEGLKA 51 >gb|ACG45040.1| hypothetical protein [Zea mays] gi|413936186|gb|AFW70737.1| hypothetical protein ZEAMMB73_610965 [Zea mays] Length = 59 Score = 67.0 bits (162), Expect = 2e-09 Identities = 29/47 (61%), Positives = 37/47 (78%) Frame = -1 Query: 372 GRGVIGEKWSGRFLWLCALGSAVGLWMVGVERQAQNRERMLRAAMEA 232 GRGV+G++WS R LW+CALGSAV L+ V VERQAQNR R + ++A Sbjct: 5 GRGVVGDRWSQRILWICALGSAVSLYFVAVERQAQNRARAVAEGLKA 51