BLASTX nr result

ID: Coptis25_contig00024700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024700
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133703.1| PREDICTED: uncharacterized protein LOC101203...    69   5e-10
ref|XP_003540092.1| PREDICTED: uncharacterized protein LOC100306...    68   7e-10
ref|XP_002335774.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|NP_001046198.1| Os02g0197400 [Oryza sativa Japonica Group] g...    67   1e-09
gb|ACG45040.1| hypothetical protein [Zea mays] gi|413936186|gb|A...    67   2e-09

>ref|XP_004133703.1| PREDICTED: uncharacterized protein LOC101203530 [Cucumis sativus]
           gi|449478162|ref|XP_004155238.1| PREDICTED:
           uncharacterized protein LOC101231659 [Cucumis sativus]
          Length = 59

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/46 (63%), Positives = 38/46 (82%)
 Frame = -1

Query: 372 GRGVIGEKWSGRFLWLCALGSAVGLWMVGVERQAQNRERMLRAAME 235
           GRGVIG+KWS R LW+CALGS +G++MV  ERQ QNR+RML  +++
Sbjct: 3   GRGVIGDKWSTRVLWVCALGSVIGMYMVAQERQLQNRQRMLTESLK 48


>ref|XP_003540092.1| PREDICTED: uncharacterized protein LOC100306575 [Glycine max]
           gi|255628927|gb|ACU14808.1| unknown [Glycine max]
          Length = 60

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/50 (68%), Positives = 39/50 (78%), Gaps = 3/50 (6%)
 Frame = -1

Query: 369 RGVIGEKWSGRFLWLCALGSAVGLWMVGVERQAQNRERMLR---AAMEAG 229
           RGVI +KWS R LW CA+GSAV L+MV VERQAQNR+RML     AME+G
Sbjct: 4   RGVIADKWSMRILWACAIGSAVSLYMVAVERQAQNRQRMLAEELKAMESG 53


>ref|XP_002335774.1| predicted protein [Populus trichocarpa]
           gi|224128173|ref|XP_002329099.1| predicted protein
           [Populus trichocarpa] gi|222834723|gb|EEE73186.1|
           predicted protein [Populus trichocarpa]
           gi|222869768|gb|EEF06899.1| predicted protein [Populus
           trichocarpa]
          Length = 60

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/46 (65%), Positives = 36/46 (78%)
 Frame = -1

Query: 372 GRGVIGEKWSGRFLWLCALGSAVGLWMVGVERQAQNRERMLRAAME 235
           GRGVIG+KWS R LW CA+GS V L+MV VERQ QNRERM+   ++
Sbjct: 3   GRGVIGDKWSSRVLWACAIGSVVSLYMVVVERQLQNRERMMAEGLK 48


>ref|NP_001046198.1| Os02g0197400 [Oryza sativa Japonica Group]
           gi|49388155|dbj|BAD25283.1| unknown protein [Oryza
           sativa Japonica Group] gi|49388340|dbj|BAD25450.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|113535729|dbj|BAF08112.1| Os02g0197400 [Oryza sativa
           Japonica Group] gi|125538481|gb|EAY84876.1| hypothetical
           protein OsI_06241 [Oryza sativa Indica Group]
           gi|215769066|dbj|BAH01295.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 61

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/47 (63%), Positives = 37/47 (78%)
 Frame = -1

Query: 372 GRGVIGEKWSGRFLWLCALGSAVGLWMVGVERQAQNRERMLRAAMEA 232
           GRGV+GE+WS R LWLCA+GSAV L+ V VERQAQNR R +   ++A
Sbjct: 5   GRGVVGERWSQRVLWLCAIGSAVSLYYVAVERQAQNRARAVAEGLKA 51


>gb|ACG45040.1| hypothetical protein [Zea mays] gi|413936186|gb|AFW70737.1|
           hypothetical protein ZEAMMB73_610965 [Zea mays]
          Length = 59

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 29/47 (61%), Positives = 37/47 (78%)
 Frame = -1

Query: 372 GRGVIGEKWSGRFLWLCALGSAVGLWMVGVERQAQNRERMLRAAMEA 232
           GRGV+G++WS R LW+CALGSAV L+ V VERQAQNR R +   ++A
Sbjct: 5   GRGVVGDRWSQRILWICALGSAVSLYFVAVERQAQNRARAVAEGLKA 51


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