BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024678
         (342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI14898.3| unnamed protein product [Vitis vinifera]              166   2e-39
emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]   166   2e-39
ref|XP_002511274.1| replication factor C / DNA polymerase III ga...   165   3e-39
ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|2...   163   2e-38
ref|XP_002523330.1| replication factor C / DNA polymerase III ga...   158   5e-37

>emb|CBI14898.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  166 bits (419), Expect = 2e-39
 Identities = 79/114 (69%), Positives = 97/114 (85%)
 Frame = +1

Query: 1   GEIWSTLFNSLDDLPRHVVFVMVTADLDSLPRAAISQCQMYHFTKIKDVDIVNKLANICV 180
           GE W+T+ NSLDDLP+HVVF+M+T  LD LPR+A+S+ Q YHF KIKD DI +KL  ICV
Sbjct: 282 GETWATVLNSLDDLPQHVVFIMITPSLDKLPRSAVSRSQRYHFPKIKDADIASKLGRICV 341

Query: 181 EEGVDFDNAALNFIAAKSNGSLRNAEITLDQLSLLGKRITISLAHELIGIVSDE 342
           EE ++FD  AL+FIAAKSNGSLR+AE+ LDQLSLLGKRIT+S+ +ELIGIVSD+
Sbjct: 342 EECLEFDQVALDFIAAKSNGSLRDAEMMLDQLSLLGKRITMSMTYELIGIVSDD 395


>emb|CAN69246.1| hypothetical protein VITISV_010442 [Vitis vinifera]
          Length = 1057

 Score =  166 bits (419), Expect = 2e-39
 Identities = 79/114 (69%), Positives = 97/114 (85%)
 Frame = +1

Query: 1   GEIWSTLFNSLDDLPRHVVFVMVTADLDSLPRAAISQCQMYHFTKIKDVDIVNKLANICV 180
           GE W+T+ NSLDDLP+HVVF+M+T  LD LPR+A+S+ Q YHF KIKD DI +KL  ICV
Sbjct: 464 GETWATVLNSLDDLPQHVVFIMITPSLDKLPRSAVSRSQRYHFPKIKDADIASKLGRICV 523

Query: 181 EEGVDFDNAALNFIAAKSNGSLRNAEITLDQLSLLGKRITISLAHELIGIVSDE 342
           EE ++FD  AL+FIAAKSNGSLR+AE+ LDQLSLLGKRIT+S+ +ELIGIVSD+
Sbjct: 524 EECLEFDQVALDFIAAKSNGSLRDAEMMLDQLSLLGKRITMSMTYELIGIVSDD 577


>ref|XP_002511274.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223550389|gb|EEF51876.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1025

 Score =  165 bits (418), Expect = 3e-39
 Identities = 78/114 (68%), Positives = 97/114 (85%)
 Frame = +1

Query: 1   GEIWSTLFNSLDDLPRHVVFVMVTADLDSLPRAAISQCQMYHFTKIKDVDIVNKLANICV 180
           GE W+T+ NSL++LP+HVVFVMVT  LD LPR+A++  Q YHF KIKD DI  +L NIC+
Sbjct: 422 GETWATILNSLENLPQHVVFVMVTPHLDKLPRSAVTHSQKYHFPKIKDADIAVRLKNICI 481

Query: 181 EEGVDFDNAALNFIAAKSNGSLRNAEITLDQLSLLGKRITISLAHELIGIVSDE 342
           EEG+DFD  AL+FIAAKSNGSLR+AE+ LDQ+SLLGKRIT+SLA+EL G+VSD+
Sbjct: 482 EEGIDFDQVALDFIAAKSNGSLRDAEMMLDQMSLLGKRITMSLAYELAGVVSDD 535


>ref|XP_002318098.1| predicted protein [Populus trichocarpa] gi|222858771|gb|EEE96318.1|
           predicted protein [Populus trichocarpa]
          Length = 965

 Score =  163 bits (412), Expect = 2e-38
 Identities = 79/114 (69%), Positives = 97/114 (85%)
 Frame = +1

Query: 1   GEIWSTLFNSLDDLPRHVVFVMVTADLDSLPRAAISQCQMYHFTKIKDVDIVNKLANICV 180
           GE W T+ NSL++L ++VVFVM+T +LD LPR+A+S+ Q YHF KIKD DI  +L NICV
Sbjct: 420 GETWGTVLNSLENLSQNVVFVMITPELDMLPRSAVSRSQKYHFPKIKDADIAGRLRNICV 479

Query: 181 EEGVDFDNAALNFIAAKSNGSLRNAEITLDQLSLLGKRITISLAHELIGIVSDE 342
           EE +DFD  AL+FIAAKS+GSLR+AEI LDQLSLLGKRIT+SLAHELIG+VSD+
Sbjct: 480 EEDLDFDQVALDFIAAKSSGSLRDAEIMLDQLSLLGKRITMSLAHELIGVVSDD 533


>ref|XP_002523330.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223537418|gb|EEF39046.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 187

 Score =  158 bits (399), Expect = 5e-37
 Identities = 75/114 (65%), Positives = 94/114 (82%)
 Frame = +1

Query: 1   GEIWSTLFNSLDDLPRHVVFVMVTADLDSLPRAAISQCQMYHFTKIKDVDIVNKLANICV 180
           GE W+T+ NSL++L +HVVFV VT  LD LPR+ ++  Q YHF KIKD DI  KL NIC+
Sbjct: 38  GETWATILNSLENLSQHVVFVTVTPHLDKLPRSVVTHSQKYHFPKIKDADIAVKLKNICI 97

Query: 181 EEGVDFDNAALNFIAAKSNGSLRNAEITLDQLSLLGKRITISLAHELIGIVSDE 342
           EEG+DFD  AL+FIAAKSNGSLR+AE+ LDQ+SLLGKRIT+SLA+EL+ +VSD+
Sbjct: 98  EEGIDFDQVALDFIAAKSNGSLRDAEMMLDQMSLLGKRITMSLAYELVRVVSDD 151