BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024672
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containi...   357   1e-96
ref|XP_002319140.1| predicted protein [Populus trichocarpa] gi|2...   344   1e-92
ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|2...   342   7e-92
ref|XP_002525469.1| pentatricopeptide repeat-containing protein,...   341   1e-91
ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containi...   332   7e-89

>ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
            mitochondrial-like [Vitis vinifera]
          Length = 566

 Score =  357 bits (917), Expect = 1e-96
 Identities = 178/261 (68%), Positives = 208/261 (79%), Gaps = 3/261 (1%)
 Frame = +2

Query: 2    LHEVLKLFNRMKHLGVSPDRKVYNAVIYALAKGKHVKEAFDLMKTMEEKGFKPNVVTYNS 181
            L++VLKLFN+MK + ++PDRKVYNAV++ALAK   VKEA +LMK ME KG  P+ VTYNS
Sbjct: 306  LNKVLKLFNQMKEMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNS 365

Query: 182  LIKPLCKGHRVEEAKVVFDEMLQKGFSPTIRTYHAFFGILKTGEEVFELLEKMKNAGCHP 361
            LIKPL +  ++ EAK VFDEMLQ+G SPTIRTYHAFF ILK+GEEVF LLEKMK  GCHP
Sbjct: 366  LIKPLSRARKINEAKEVFDEMLQRGLSPTIRTYHAFFRILKSGEEVFMLLEKMKETGCHP 425

Query: 362  VNDTYIMLIRKFCRWRQIENVFKLWSEMSENGLSPDRSSYIVLIHGLFLNGKLEEAWKYY 541
              DTYIMLIR+FCRWRQ++NVFKLWSEMSENG+ PDRSSYIVLIHGLFLNGKLEEA+KYY
Sbjct: 426  DKDTYIMLIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLEEAYKYY 485

Query: 542  EEMKEKGFLPEPKTEEMLQAFASARQTAGT--LDF-NNQMGLDSSKKNPKVVLNTSSYEK 712
             EMKEK FLPEPKTE+MLQA+ S ++TA    +D  +NQ     S K   V        +
Sbjct: 486  IEMKEKQFLPEPKTEDMLQAWISGKETADVRMIDLKDNQSDHGQSSKKTLVTSKNVDLGR 545

Query: 713  DFLKLPETRKVTREKGFSFWD 775
            DF + PETRKVTRE+GFSFW+
Sbjct: 546  DFRQQPETRKVTRERGFSFWE 566


>ref|XP_002319140.1| predicted protein [Populus trichocarpa] gi|222857516|gb|EEE95063.1|
           predicted protein [Populus trichocarpa]
          Length = 296

 Score =  344 bits (882), Expect = 1e-92
 Identities = 171/271 (63%), Positives = 209/271 (77%), Gaps = 13/271 (4%)
 Frame = +2

Query: 2   LHEVLKLFNRMKHLGVSPDRKVYNAVIYALAKGKHVKEAFDLMKTMEEKGFKPNVVTYNS 181
           L+ VL+L+ +MK +G+ PDRKVYNAVI+ALAKG+ V EAF+LMKTMEEKG  PN+VTYNS
Sbjct: 26  LYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNS 85

Query: 182 LIKPLCKGHRVEEAKVVFDEMLQKGFSPTIRTYHAFFGILKTGEEVFELLEKMKNAGCHP 361
           LIKPLC+  +VEEAK  FD+ML++  SPTIRTYHAF  IL+TGEEVF LLEKM+  GC P
Sbjct: 86  LIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRILRTGEEVFALLEKMRKMGCQP 145

Query: 362 VNDTYIMLIRKFCRWRQIENVFKLWSEMSENGLSPDRSSYIVLIHGLFLNGKLEEAWKYY 541
           +NDTYIMLIRKFCRWRQ+ENVFKLW EMSENG+SPDRSSYIVLIHGLFLNG+L+ A KYY
Sbjct: 146 INDTYIMLIRKFCRWRQLENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYY 205

Query: 542 EEMKEKGFLPEPKTEEMLQAFASARQTA-------------GTLDFNNQMGLDSSKKNPK 682
            EMKEK  LPEPK +EMLQ + S +Q A              T   +NQ+    S++  +
Sbjct: 206 TEMKEKQLLPEPKIDEMLQTWLSNKQIAEGQTTESRSNQCQTTELRSNQLDCSQSREQTR 265

Query: 683 VVLNTSSYEKDFLKLPETRKVTREKGFSFWD 775
            +    S+E++F++  ETRKV RE+GFSFW+
Sbjct: 266 DI-PKRSHERNFIRQAETRKVVRERGFSFWE 295


>ref|XP_002319139.1| predicted protein [Populus trichocarpa] gi|222857515|gb|EEE95062.1|
            predicted protein [Populus trichocarpa]
          Length = 518

 Score =  342 bits (876), Expect = 7e-92
 Identities = 170/271 (62%), Positives = 208/271 (76%), Gaps = 13/271 (4%)
 Frame = +2

Query: 2    LHEVLKLFNRMKHLGVSPDRKVYNAVIYALAKGKHVKEAFDLMKTMEEKGFKPNVVTYNS 181
            L+ VL+L+ +MK +G+ PDRKVYNAVI+ALAKG+ V EAF+LMKTMEEKG  PN+VTYNS
Sbjct: 248  LYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNS 307

Query: 182  LIKPLCKGHRVEEAKVVFDEMLQKGFSPTIRTYHAFFGILKTGEEVFELLEKMKNAGCHP 361
            LIKPLC+  +VEEAK  FD+ML++  SPTIRTYHAF  IL+TGEEVF LLEKM+  GC P
Sbjct: 308  LIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHAFLRILRTGEEVFALLEKMRKMGCQP 367

Query: 362  VNDTYIMLIRKFCRWRQIENVFKLWSEMSENGLSPDRSSYIVLIHGLFLNGKLEEAWKYY 541
            +NDTYIMLIRKFCRWRQ+ENVFKLW EMSENG+SPDRSSYIVLIHGLFLNG+L+ A KYY
Sbjct: 368  INDTYIMLIRKFCRWRQLENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYY 427

Query: 542  EEMKEKGFLPEPKTEEMLQAFASARQTA-------------GTLDFNNQMGLDSSKKNPK 682
             EMKEK  LPEPK +EMLQ + S +Q A              T   +NQ+    S++  +
Sbjct: 428  TEMKEKQLLPEPKIDEMLQTWLSNKQIAEGQTTESRSNQCQTTELRSNQLDCSQSREQTR 487

Query: 683  VVLNTSSYEKDFLKLPETRKVTREKGFSFWD 775
             +    S+E++F++  ETRKV RE+G SFW+
Sbjct: 488  GI-PKRSHERNFIRQAETRKVVRERGISFWE 517


>ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223535282|gb|EEF36959.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score =  341 bits (874), Expect = 1e-91
 Identities = 164/260 (63%), Positives = 205/260 (78%), Gaps = 3/260 (1%)
 Frame = +2

Query: 2    LHEVLKLFNRMKHLGVSPDRKVYNAVIYALAKGKHVKEAFDLMKTMEEKGFKPNVVTYNS 181
            L++V KL+N+MK +G+ PDRK+YN+VI+ALAKG+HV EA +LMKTMEEKG  PN VTYNS
Sbjct: 320  LYKVFKLYNQMKEVGIEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNS 379

Query: 182  LIKPLCKGHRVEEAKVVFDEMLQKGFSPTIRTYHAFFGILKTGEEVFELLEKMKNAGCHP 361
            LIKPLC+  +++EA+ +FDEMLQ G SPTIRTYHAFF  L+TGEEVF LLE M+  GCHP
Sbjct: 380  LIKPLCRARKIDEARGLFDEMLQHGHSPTIRTYHAFFRSLRTGEEVFALLENMRKLGCHP 439

Query: 362  VNDTYIMLIRKFCRWRQIENVFKLWSEMSENGLSPDRSSYIVLIHGLFLNGKLEEAWKYY 541
              DTYIMLIRKFCRWRQ ++VFKLW+++SENGL PDRSSYIVLIHGLFLNGKLEEA+K+Y
Sbjct: 440  TIDTYIMLIRKFCRWRQFDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLEEAYKFY 499

Query: 542  EEMKEKGFLPEPKTEEMLQAFASARQTAGTLDFNNQMG-LDSSK--KNPKVVLNTSSYEK 712
             +MKEK  LP+PK +EMLQ + S +Q A      +++  LD S+     +      ++EK
Sbjct: 500  ADMKEKQLLPDPKLDEMLQTWLSNKQVAECQMTESKVDQLDCSRLGNQRRATSKRINHEK 559

Query: 713  DFLKLPETRKVTREKGFSFW 772
            DFL+  E R+V RE+GFSFW
Sbjct: 560  DFLQQAEIRRVVRERGFSFW 579


>ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
            mitochondrial-like [Glycine max]
          Length = 516

 Score =  332 bits (850), Expect = 7e-89
 Identities = 163/262 (62%), Positives = 207/262 (79%), Gaps = 3/262 (1%)
 Frame = +2

Query: 2    LHEVLKLFNRMKHLGVSPDRKVYNAVIYALAKGKHVKEAFDLMKTMEEKGFKPNVVTYNS 181
            L++VL++F+ MK   ++PDRKVYNAVIYALAKG+ VKEA +L+ T+E+    PNVVTYNS
Sbjct: 255  LYKVLRMFDEMKKRKITPDRKVYNAVIYALAKGRLVKEAVNLIGTLEDNDVTPNVVTYNS 314

Query: 182  LIKPLCKGHRVEEAKVVFDEMLQKGFSPTIRTYHAFFGILKTGEEVFELLEKMKNAGCHP 361
            LIKPLCK  +V+EAK +F E+L++  SPTI+T+HAFF IL+T EEVFELL+KMK  GC+P
Sbjct: 315  LIKPLCKAGKVDEAKQLFYEILKRHLSPTIQTFHAFFRILRTKEEVFELLDKMKELGCYP 374

Query: 362  VNDTYIMLIRKFCRWRQIENVFKLWSEMSENGLSPDRSSYIVLIHGLFLNGKLEEAWKYY 541
              +TYIML+RKFCRWRQ+++VFK+W  M E+G+  DRSSYIVLIHGLFLNGKLEEA  YY
Sbjct: 375  TIETYIMLMRKFCRWRQLDDVFKMWDAMREDGIGHDRSSYIVLIHGLFLNGKLEEAHTYY 434

Query: 542  EEMKEKGFLPEPKTEEMLQAFASARQTAGTLDFN---NQMGLDSSKKNPKVVLNTSSYEK 712
             EM+EKGFLPEPKTEEMLQA+ S +Q     + N   NQ+  D+ KK  K + +    EK
Sbjct: 435  AEMQEKGFLPEPKTEEMLQAWVSGKQATEGQETNLEPNQLENDTLKKKVKAIPSKFDREK 494

Query: 713  DFLKLPETRKVTREKGFSFWDK 778
             FL+ PETR+VTRE+GFSFW++
Sbjct: 495  AFLREPETRRVTRERGFSFWEQ 516