BLASTX nr result

ID: Coptis25_contig00024661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024661
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141067.1| PREDICTED: threonine synthase, chloroplastic...   224   4e-57
ref|XP_002285366.1| PREDICTED: threonine synthase, chloroplastic...   224   4e-57
ref|XP_002521363.1| threonine synthase, putative [Ricinus commun...   223   1e-56
gb|AGA60119.1| threonine synthase [Lens culinaris]                    223   2e-56
ref|XP_003597553.1| Threonine synthase [Medicago truncatula] gi|...   223   2e-56

>ref|XP_004141067.1| PREDICTED: threonine synthase, chloroplastic-like [Cucumis sativus]
           gi|449488071|ref|XP_004157932.1| PREDICTED: threonine
           synthase, chloroplastic-like [Cucumis sativus]
          Length = 529

 Score =  224 bits (572), Expect = 4e-57
 Identities = 112/130 (86%), Positives = 119/130 (91%)
 Frame = +3

Query: 3   SHTGSFKDLGMTVLVSQVNRLRKLNRPIVGVGCASTGDTSXXXXXXXXXXGIPAIVFLPT 182
           SHTGSFKDLGMTVLVSQVNRLRK+NRP+VGVGCASTGDTS          GIP+IVFLP 
Sbjct: 198 SHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAALSAYCAAAGIPSIVFLPA 257

Query: 183 DRISMAQLVQPIANGAFVLSLDTDFDGCMQLIREITAELPIYLANSLNSLRLEGQKTAAI 362
           D+ISMAQLVQPIANGAFVLS+DTDFDGCM+LIRE+TAELPIYLANSLNSLRLEGQKTAAI
Sbjct: 258 DKISMAQLVQPIANGAFVLSMDTDFDGCMKLIREVTAELPIYLANSLNSLRLEGQKTAAI 317

Query: 363 EILQQFDWEV 392
           EILQQFDWEV
Sbjct: 318 EILQQFDWEV 327


>ref|XP_002285366.1| PREDICTED: threonine synthase, chloroplastic [Vitis vinifera]
          Length = 522

 Score =  224 bits (572), Expect = 4e-57
 Identities = 113/130 (86%), Positives = 119/130 (91%)
 Frame = +3

Query: 3   SHTGSFKDLGMTVLVSQVNRLRKLNRPIVGVGCASTGDTSXXXXXXXXXXGIPAIVFLPT 182
           SHTGSFKDLGMTVLVSQVNRLRK+NRP+VGVGCASTGDTS          GIP+IVFLP 
Sbjct: 193 SHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAALSAYCAAAGIPSIVFLPA 252

Query: 183 DRISMAQLVQPIANGAFVLSLDTDFDGCMQLIREITAELPIYLANSLNSLRLEGQKTAAI 362
           +RIS+AQLVQPIANGAFVLSLDTDFDGCMQLIRE+TAELPIYLANSLNSLRLEGQKTAAI
Sbjct: 253 NRISIAQLVQPIANGAFVLSLDTDFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAI 312

Query: 363 EILQQFDWEV 392
           EILQQFDWEV
Sbjct: 313 EILQQFDWEV 322


>ref|XP_002521363.1| threonine synthase, putative [Ricinus communis]
           gi|223539441|gb|EEF41031.1| threonine synthase, putative
           [Ricinus communis]
          Length = 531

 Score =  223 bits (568), Expect = 1e-56
 Identities = 111/130 (85%), Positives = 119/130 (91%)
 Frame = +3

Query: 3   SHTGSFKDLGMTVLVSQVNRLRKLNRPIVGVGCASTGDTSXXXXXXXXXXGIPAIVFLPT 182
           SHTGSFKDLGMTVLVSQVNRLRK+N+P+VGVGCASTGDTS          GIP+IVFLP 
Sbjct: 202 SHTGSFKDLGMTVLVSQVNRLRKMNKPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPA 261

Query: 183 DRISMAQLVQPIANGAFVLSLDTDFDGCMQLIREITAELPIYLANSLNSLRLEGQKTAAI 362
           ++ISMAQLVQPIANGAFVLS+DTDFDGCMQLIRE+TAELPIYLANSLNSLRLEGQKTAAI
Sbjct: 262 NKISMAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAI 321

Query: 363 EILQQFDWEV 392
           EILQQFDWEV
Sbjct: 322 EILQQFDWEV 331


>gb|AGA60119.1| threonine synthase [Lens culinaris]
          Length = 537

 Score =  223 bits (567), Expect = 2e-56
 Identities = 111/130 (85%), Positives = 119/130 (91%)
 Frame = +3

Query: 3   SHTGSFKDLGMTVLVSQVNRLRKLNRPIVGVGCASTGDTSXXXXXXXXXXGIPAIVFLPT 182
           SHTGSFKDLGMTVLVSQVNRLRK+NRP+VGVGCASTGDTS          GIP+IVFLP 
Sbjct: 207 SHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPA 266

Query: 183 DRISMAQLVQPIANGAFVLSLDTDFDGCMQLIREITAELPIYLANSLNSLRLEGQKTAAI 362
           +RIS+AQLVQPIANGAFVLS+DTDFDGCMQLIRE+TAELPIYLANSLNSLRLEGQKTAAI
Sbjct: 267 NRISIAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAI 326

Query: 363 EILQQFDWEV 392
           EILQQFDW+V
Sbjct: 327 EILQQFDWQV 336


>ref|XP_003597553.1| Threonine synthase [Medicago truncatula]
           gi|355486601|gb|AES67804.1| Threonine synthase [Medicago
           truncatula]
          Length = 532

 Score =  223 bits (567), Expect = 2e-56
 Identities = 111/130 (85%), Positives = 119/130 (91%)
 Frame = +3

Query: 3   SHTGSFKDLGMTVLVSQVNRLRKLNRPIVGVGCASTGDTSXXXXXXXXXXGIPAIVFLPT 182
           SHTGSFKDLGMTVLVSQVNRLRK+NRP+VGVGCASTGDTS          GIP+IVFLP 
Sbjct: 202 SHTGSFKDLGMTVLVSQVNRLRKMNRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPA 261

Query: 183 DRISMAQLVQPIANGAFVLSLDTDFDGCMQLIREITAELPIYLANSLNSLRLEGQKTAAI 362
           +RIS+AQLVQPIANGAFVLS+DTDFDGCMQLIRE+TAELPIYLANSLNSLRLEGQKTAAI
Sbjct: 262 NRISIAQLVQPIANGAFVLSIDTDFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAI 321

Query: 363 EILQQFDWEV 392
           EILQQFDW+V
Sbjct: 322 EILQQFDWQV 331


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