BLASTX nr result
ID: Coptis25_contig00024655
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024655 (323 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI16742.3| unnamed protein product [Vitis vinifera] 137 1e-30 emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera] 137 1e-30 ref|XP_002520828.1| pentatricopeptide repeat-containing protein,... 135 5e-30 ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containi... 118 6e-25 ref|NP_001054452.1| Os05g0112900 [Oryza sativa Japonica Group] g... 107 1e-21 >emb|CBI16742.3| unnamed protein product [Vitis vinifera] Length = 674 Score = 137 bits (344), Expect = 1e-30 Identities = 67/107 (62%), Positives = 86/107 (80%) Frame = +3 Query: 3 MITAYANGGLMIEATELFNLMCERNTVTWNAMIDGYSRNGPQYEALKLLILMLRASVRPN 182 MITAY + L++EA+ELFNLM ERN VTWNAMIDGY+R+ P EA+K LILMLR+ +RPN Sbjct: 323 MITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPN 382 Query: 183 ETTITSVVSACESRVELIQIHTLVMLTGFDFETSLSNALITMYSRCG 323 ETT+T ++++C +EL+Q H L ++ G + ETSLSNALITMYSR G Sbjct: 383 ETTMTIILTSCWGMLELMQAHALAIVVGCECETSLSNALITMYSRIG 429 >emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera] Length = 932 Score = 137 bits (344), Expect = 1e-30 Identities = 67/107 (62%), Positives = 86/107 (80%) Frame = +3 Query: 3 MITAYANGGLMIEATELFNLMCERNTVTWNAMIDGYSRNGPQYEALKLLILMLRASVRPN 182 MITAY + L++EA+ELFNLM ERN VTWNAMIDGY+R+ P EA+K LILMLR+ +RPN Sbjct: 229 MITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPN 288 Query: 183 ETTITSVVSACESRVELIQIHTLVMLTGFDFETSLSNALITMYSRCG 323 ETT+T ++++C +EL+Q H L ++ G + ETSLSNALITMYSR G Sbjct: 289 ETTMTIILTSCWGMLELMQAHALAIVVGCECETSLSNALITMYSRIG 335 >ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] gi|223539959|gb|EEF41537.1| pentatricopeptide repeat-containing protein, putative [Ricinus communis] Length = 656 Score = 135 bits (339), Expect = 5e-30 Identities = 64/107 (59%), Positives = 86/107 (80%) Frame = +3 Query: 3 MITAYANGGLMIEATELFNLMCERNTVTWNAMIDGYSRNGPQYEALKLLILMLRASVRPN 182 MITAY + G M EA+ LFNLM E+N V+WNA+IDGY+RNGP+ +L+ LILMLR++ +PN Sbjct: 305 MITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLILMLRSNFKPN 364 Query: 183 ETTITSVVSACESRVELIQIHTLVMLTGFDFETSLSNALITMYSRCG 323 ETTITSV++AC+S +EL+Q H LV+ GF+ + L+N L+T YSRCG Sbjct: 365 ETTITSVLTACDSILELMQAHGLVIHLGFEQDKVLANGLVTTYSRCG 411 >ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09410-like [Glycine max] Length = 669 Score = 118 bits (295), Expect = 6e-25 Identities = 59/107 (55%), Positives = 79/107 (73%) Frame = +3 Query: 3 MITAYANGGLMIEATELFNLMCERNTVTWNAMIDGYSRNGPQYEALKLLILMLRASVRPN 182 MITA + GLM EA +LF+ + E+N +WN MIDGY+RN EAL L +LMLR+ RPN Sbjct: 319 MITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYVGEALNLFVLMLRSCFRPN 378 Query: 183 ETTITSVVSACESRVELIQIHTLVMLTGFDFETSLSNALITMYSRCG 323 ETT+TSVV++C+ VEL+Q H +V+ GF+ T L+NALIT+YS+ G Sbjct: 379 ETTMTSVVTSCDGMVELMQAHAMVIHLGFEHNTWLTNALITLYSKSG 425 >ref|NP_001054452.1| Os05g0112900 [Oryza sativa Japonica Group] gi|45680436|gb|AAS75237.1| unknown protein [Oryza sativa Japonica Group] gi|113578003|dbj|BAF16366.1| Os05g0112900 [Oryza sativa Japonica Group] gi|215715346|dbj|BAG95097.1| unnamed protein product [Oryza sativa Japonica Group] gi|215736909|dbj|BAG95838.1| unnamed protein product [Oryza sativa Japonica Group] gi|222629956|gb|EEE62088.1| hypothetical protein OsJ_16872 [Oryza sativa Japonica Group] Length = 661 Score = 107 bits (266), Expect = 1e-21 Identities = 54/107 (50%), Positives = 74/107 (69%) Frame = +3 Query: 3 MITAYANGGLMIEATELFNLMCERNTVTWNAMIDGYSRNGPQYEALKLLILMLRASVRPN 182 MITAY N G + +A LF++M +N VTWN +IDGYS N + EAL+L +LMLR++V P+ Sbjct: 315 MITAYTNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYSMNNLKDEALRLFLLMLRSAVSPD 374 Query: 183 ETTITSVVSACESRVELIQIHTLVMLTGFDFETSLSNALITMYSRCG 323 TT+ SV+ ES +E+ QIH L G+ ET+L N L++MYSR G Sbjct: 375 STTLISVLVVSESTMEVRQIHGLSTKLGYQPETNLGNTLVSMYSRSG 421