BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024655
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16742.3| unnamed protein product [Vitis vinifera]              137   1e-30
emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]   137   1e-30
ref|XP_002520828.1| pentatricopeptide repeat-containing protein,...   135   5e-30
ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containi...   118   6e-25
ref|NP_001054452.1| Os05g0112900 [Oryza sativa Japonica Group] g...   107   1e-21

>emb|CBI16742.3| unnamed protein product [Vitis vinifera]
          Length = 674

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/107 (62%), Positives = 86/107 (80%)
 Frame = +3

Query: 3   MITAYANGGLMIEATELFNLMCERNTVTWNAMIDGYSRNGPQYEALKLLILMLRASVRPN 182
           MITAY +  L++EA+ELFNLM ERN VTWNAMIDGY+R+ P  EA+K LILMLR+ +RPN
Sbjct: 323 MITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPN 382

Query: 183 ETTITSVVSACESRVELIQIHTLVMLTGFDFETSLSNALITMYSRCG 323
           ETT+T ++++C   +EL+Q H L ++ G + ETSLSNALITMYSR G
Sbjct: 383 ETTMTIILTSCWGMLELMQAHALAIVVGCECETSLSNALITMYSRIG 429


>emb|CAN79322.1| hypothetical protein VITISV_018985 [Vitis vinifera]
          Length = 932

 Score =  137 bits (344), Expect = 1e-30
 Identities = 67/107 (62%), Positives = 86/107 (80%)
 Frame = +3

Query: 3   MITAYANGGLMIEATELFNLMCERNTVTWNAMIDGYSRNGPQYEALKLLILMLRASVRPN 182
           MITAY +  L++EA+ELFNLM ERN VTWNAMIDGY+R+ P  EA+K LILMLR+ +RPN
Sbjct: 229 MITAYVDECLIVEASELFNLMTERNIVTWNAMIDGYARHRPDGEAMKHLILMLRSCIRPN 288

Query: 183 ETTITSVVSACESRVELIQIHTLVMLTGFDFETSLSNALITMYSRCG 323
           ETT+T ++++C   +EL+Q H L ++ G + ETSLSNALITMYSR G
Sbjct: 289 ETTMTIILTSCWGMLELMQAHALAIVVGCECETSLSNALITMYSRIG 335


>ref|XP_002520828.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539959|gb|EEF41537.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 656

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/107 (59%), Positives = 86/107 (80%)
 Frame = +3

Query: 3   MITAYANGGLMIEATELFNLMCERNTVTWNAMIDGYSRNGPQYEALKLLILMLRASVRPN 182
           MITAY + G M EA+ LFNLM E+N V+WNA+IDGY+RNGP+  +L+ LILMLR++ +PN
Sbjct: 305 MITAYVDQGSMAEASNLFNLMPEKNIVSWNALIDGYARNGPESNSLRYLILMLRSNFKPN 364

Query: 183 ETTITSVVSACESRVELIQIHTLVMLTGFDFETSLSNALITMYSRCG 323
           ETTITSV++AC+S +EL+Q H LV+  GF+ +  L+N L+T YSRCG
Sbjct: 365 ETTITSVLTACDSILELMQAHGLVIHLGFEQDKVLANGLVTTYSRCG 411


>ref|XP_003534752.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09410-like [Glycine max]
          Length = 669

 Score =  118 bits (295), Expect = 6e-25
 Identities = 59/107 (55%), Positives = 79/107 (73%)
 Frame = +3

Query: 3   MITAYANGGLMIEATELFNLMCERNTVTWNAMIDGYSRNGPQYEALKLLILMLRASVRPN 182
           MITA  + GLM EA +LF+ + E+N  +WN MIDGY+RN    EAL L +LMLR+  RPN
Sbjct: 319 MITACVDEGLMDEARKLFDQIPEKNVGSWNTMIDGYARNSYVGEALNLFVLMLRSCFRPN 378

Query: 183 ETTITSVVSACESRVELIQIHTLVMLTGFDFETSLSNALITMYSRCG 323
           ETT+TSVV++C+  VEL+Q H +V+  GF+  T L+NALIT+YS+ G
Sbjct: 379 ETTMTSVVTSCDGMVELMQAHAMVIHLGFEHNTWLTNALITLYSKSG 425


>ref|NP_001054452.1| Os05g0112900 [Oryza sativa Japonica Group]
           gi|45680436|gb|AAS75237.1| unknown protein [Oryza sativa
           Japonica Group] gi|113578003|dbj|BAF16366.1|
           Os05g0112900 [Oryza sativa Japonica Group]
           gi|215715346|dbj|BAG95097.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215736909|dbj|BAG95838.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222629956|gb|EEE62088.1| hypothetical protein
           OsJ_16872 [Oryza sativa Japonica Group]
          Length = 661

 Score =  107 bits (266), Expect = 1e-21
 Identities = 54/107 (50%), Positives = 74/107 (69%)
 Frame = +3

Query: 3   MITAYANGGLMIEATELFNLMCERNTVTWNAMIDGYSRNGPQYEALKLLILMLRASVRPN 182
           MITAY N G + +A  LF++M  +N VTWN +IDGYS N  + EAL+L +LMLR++V P+
Sbjct: 315 MITAYTNDGQVNDAQRLFDIMPSKNLVTWNIIIDGYSMNNLKDEALRLFLLMLRSAVSPD 374

Query: 183 ETTITSVVSACESRVELIQIHTLVMLTGFDFETSLSNALITMYSRCG 323
            TT+ SV+   ES +E+ QIH L    G+  ET+L N L++MYSR G
Sbjct: 375 STTLISVLVVSESTMEVRQIHGLSTKLGYQPETNLGNTLVSMYSRSG 421