BLASTX nr result

ID: Coptis25_contig00024652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024652
         (553 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635088.1| PREDICTED: uncharacterized protein LOC100853...   281   5e-74
emb|CAN83308.1| hypothetical protein VITISV_023019 [Vitis vinifera]   281   5e-74
emb|CBI38353.3| unnamed protein product [Vitis vinifera]              280   1e-73
ref|XP_002310772.1| predicted protein [Populus trichocarpa] gi|2...   276   1e-72
ref|XP_002522392.1| electron transporter, putative [Ricinus comm...   273   1e-71

>ref|XP_003635088.1| PREDICTED: uncharacterized protein LOC100853414 [Vitis vinifera]
          Length = 595

 Score =  281 bits (719), Expect = 5e-74
 Identities = 137/184 (74%), Positives = 152/184 (82%)
 Frame = -1

Query: 553 SDHILETPNKFSEDMIKCISAIYCKLADPPLTGEGXXXXXXXXXXXXXXXPQDQCDMWSP 374
           SDH+ ETPN+ SEDMIKC+SAI+CKLADPPLT  G               PQD CDMWSP
Sbjct: 256 SDHVPETPNRISEDMIKCMSAIFCKLADPPLTHHGLSSPNSSLSSISAFSPQDHCDMWSP 315

Query: 373 RYRKDSSFDARLDNPFNVEGLKEFSGPYSTMVEVPCIYRDNQRLTEVDDLLQTYRSLVCR 194
            +RKDSSFD RLDNPF+VEGLKEFSGPYSTMVEVP IYRDNQ+L  ++ +LQ +RSL+ R
Sbjct: 316 GFRKDSSFDVRLDNPFHVEGLKEFSGPYSTMVEVPWIYRDNQKLGAIEHMLQNFRSLISR 375

Query: 193 LEEIDPRKMKHEEKIAFWINIHNALVMHAFLAYGIPQNNLKRVSLLLKAAYNVGGQTISA 14
           LEE+D RKMKHEEKIAFWINIHNALVMHAFLAYGIPQ N+KRV LLLKAAYNVGGQTISA
Sbjct: 376 LEEVDLRKMKHEEKIAFWINIHNALVMHAFLAYGIPQTNVKRVFLLLKAAYNVGGQTISA 435

Query: 13  DMIR 2
           D I+
Sbjct: 436 DTIQ 439


>emb|CAN83308.1| hypothetical protein VITISV_023019 [Vitis vinifera]
          Length = 719

 Score =  281 bits (719), Expect = 5e-74
 Identities = 137/184 (74%), Positives = 152/184 (82%)
 Frame = -1

Query: 553 SDHILETPNKFSEDMIKCISAIYCKLADPPLTGEGXXXXXXXXXXXXXXXPQDQCDMWSP 374
           SDH+ ETPN+ SEDMIKC+SAI+CKLADPPLT  G               PQD CDMWSP
Sbjct: 380 SDHVPETPNRISEDMIKCMSAIFCKLADPPLTHHGLSSPNSSLSSISAFSPQDHCDMWSP 439

Query: 373 RYRKDSSFDARLDNPFNVEGLKEFSGPYSTMVEVPCIYRDNQRLTEVDDLLQTYRSLVCR 194
            +RKDSSFD RLDNPF+VEGLKEFSGPYSTMVEVP IYRDNQ+L  ++ +LQ +RSL+ R
Sbjct: 440 GFRKDSSFDVRLDNPFHVEGLKEFSGPYSTMVEVPWIYRDNQKLGAIEHMLQNFRSLISR 499

Query: 193 LEEIDPRKMKHEEKIAFWINIHNALVMHAFLAYGIPQNNLKRVSLLLKAAYNVGGQTISA 14
           LEE+D RKMKHEEKIAFWINIHNALVMHAFLAYGIPQ N+KRV LLLKAAYNVGGQTISA
Sbjct: 500 LEEVDLRKMKHEEKIAFWINIHNALVMHAFLAYGIPQTNVKRVFLLLKAAYNVGGQTISA 559

Query: 13  DMIR 2
           D I+
Sbjct: 560 DTIQ 563


>emb|CBI38353.3| unnamed protein product [Vitis vinifera]
          Length = 586

 Score =  280 bits (716), Expect = 1e-73
 Identities = 136/184 (73%), Positives = 152/184 (82%)
 Frame = -1

Query: 553 SDHILETPNKFSEDMIKCISAIYCKLADPPLTGEGXXXXXXXXXXXXXXXPQDQCDMWSP 374
           SDH+ ETPN+ SEDMIKC+SAI+CKLADPPLT  G               PQD CDMWSP
Sbjct: 292 SDHVPETPNRISEDMIKCMSAIFCKLADPPLTHHGLSSPNSSLSSISAFSPQDHCDMWSP 351

Query: 373 RYRKDSSFDARLDNPFNVEGLKEFSGPYSTMVEVPCIYRDNQRLTEVDDLLQTYRSLVCR 194
            +RKDSSFD RLDNPF+VEGLKEFSGPYSTMVEVP IYRDNQ++  ++ +LQ +RSL+ R
Sbjct: 352 GFRKDSSFDVRLDNPFHVEGLKEFSGPYSTMVEVPWIYRDNQKVGAIEHMLQNFRSLISR 411

Query: 193 LEEIDPRKMKHEEKIAFWINIHNALVMHAFLAYGIPQNNLKRVSLLLKAAYNVGGQTISA 14
           LEE+D RKMKHEEKIAFWINIHNALVMHAFLAYGIPQ N+KRV LLLKAAYNVGGQTISA
Sbjct: 412 LEEVDLRKMKHEEKIAFWINIHNALVMHAFLAYGIPQTNVKRVFLLLKAAYNVGGQTISA 471

Query: 13  DMIR 2
           D I+
Sbjct: 472 DTIQ 475


>ref|XP_002310772.1| predicted protein [Populus trichocarpa] gi|222853675|gb|EEE91222.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score =  276 bits (707), Expect = 1e-72
 Identities = 130/183 (71%), Positives = 153/183 (83%)
 Frame = -1

Query: 550 DHILETPNKFSEDMIKCISAIYCKLADPPLTGEGXXXXXXXXXXXXXXXPQDQCDMWSPR 371
           DH+ ETPNK SEDMIKC+SAIYCKL+DPPLT  G               P++QCDMWSP 
Sbjct: 229 DHVPETPNKLSEDMIKCMSAIYCKLSDPPLTHNGLSSPNSSLSSMSAFSPREQCDMWSPG 288

Query: 370 YRKDSSFDARLDNPFNVEGLKEFSGPYSTMVEVPCIYRDNQRLTEVDDLLQTYRSLVCRL 191
           +R +SSFD RLDNPF VEGLKEFSGPYSTM+EVP IYRD+Q+L +V++LLQ +RSL+CRL
Sbjct: 289 FRNNSSFDVRLDNPFLVEGLKEFSGPYSTMIEVPWIYRDSQKLGDVENLLQNFRSLICRL 348

Query: 190 EEIDPRKMKHEEKIAFWINIHNALVMHAFLAYGIPQNNLKRVSLLLKAAYNVGGQTISAD 11
           EE+DPRK+KHEE++AFWINIHNALVMHAFLAYGIPQNN+KR+ LLL+AAYNVGG T SAD
Sbjct: 349 EEVDPRKLKHEERLAFWINIHNALVMHAFLAYGIPQNNVKRLFLLLRAAYNVGGHTFSAD 408

Query: 10  MIR 2
            I+
Sbjct: 409 TIQ 411


>ref|XP_002522392.1| electron transporter, putative [Ricinus communis]
           gi|223538470|gb|EEF40076.1| electron transporter,
           putative [Ricinus communis]
          Length = 618

 Score =  273 bits (699), Expect = 1e-71
 Identities = 131/184 (71%), Positives = 151/184 (82%)
 Frame = -1

Query: 553 SDHILETPNKFSEDMIKCISAIYCKLADPPLTGEGXXXXXXXXXXXXXXXPQDQCDMWSP 374
           SDH+ ETPNK SEDMI+C+SAIY KL+DPPLT  G               P+DQ DMWSP
Sbjct: 279 SDHVPETPNKVSEDMIRCMSAIYSKLSDPPLTHNGLSSPNSSLSSMSAYSPRDQSDMWSP 338

Query: 373 RYRKDSSFDARLDNPFNVEGLKEFSGPYSTMVEVPCIYRDNQRLTEVDDLLQTYRSLVCR 194
            +R +SSFD RLDNPF VEGLKEFSGPYS MVEVPCIYRD+Q+L +VD LLQ +RSL+C+
Sbjct: 339 GFRNNSSFDVRLDNPFLVEGLKEFSGPYSAMVEVPCIYRDSQKLGDVDHLLQNFRSLICQ 398

Query: 193 LEEIDPRKMKHEEKIAFWINIHNALVMHAFLAYGIPQNNLKRVSLLLKAAYNVGGQTISA 14
           LEE+DPRK+ HEEK+AFWINIHNALVMHAFLAYGIPQNN+KR+ LLLKAAYN+GG TISA
Sbjct: 399 LEEVDPRKLTHEEKLAFWINIHNALVMHAFLAYGIPQNNVKRLFLLLKAAYNIGGHTISA 458

Query: 13  DMIR 2
           D I+
Sbjct: 459 DTIQ 462


Top