BLASTX nr result
ID: Coptis25_contig00024641
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024641 (871 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|2... 292 8e-77 gb|ABK93021.1| unknown [Populus trichocarpa] 291 2e-76 ref|XP_002276213.1| PREDICTED: microtubule-associated protein RP... 288 1e-75 ref|XP_002330097.1| predicted protein [Populus trichocarpa] gi|2... 276 3e-72 ref|XP_003580659.1| PREDICTED: microtubule-associated protein RP... 274 2e-71 >ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|222859277|gb|EEE96824.1| predicted protein [Populus trichocarpa] Length = 272 Score = 292 bits (747), Expect = 8e-77 Identities = 147/201 (73%), Positives = 167/201 (83%), Gaps = 3/201 (1%) Frame = +3 Query: 3 VNFDAKSEYDMIQNYKLLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSING 182 VNFDAK+EYDMIQNYK+LQ+VF KLK+EKHIEVNRLVKGRPLDNLEFLQWLKRYCDS+NG Sbjct: 60 VNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNG 119 Query: 183 GITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSSNGTKQGKV---GGSMSD 353 GI NENYNPVERR KGGK+RNSKGSQK TKSL NN N SS+ K+ G +++ Sbjct: 120 GIMNENYNPVERRSKGGKDRNSKGSQKTTKSLQANNLHNSASSDTVDLNKMSGKGSAVAG 179 Query: 354 GAYSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLPVAAAFKKI 533 GA + IQAL+ ++ +LKLSVDHLEKERDFYFAKLRDIEILCQ PE+E+LP+ A KKI Sbjct: 180 GATYSEEIQALSKEVTNLKLSVDHLEKERDFYFAKLRDIEILCQIPEMEDLPMTVAIKKI 239 Query: 534 LYAADAKESALPEAQELLTIA 596 LYA DAKESAL EAQE L+ A Sbjct: 240 LYADDAKESALEEAQEYLSEA 260 >gb|ABK93021.1| unknown [Populus trichocarpa] Length = 276 Score = 291 bits (744), Expect = 2e-76 Identities = 148/206 (71%), Positives = 169/206 (82%), Gaps = 8/206 (3%) Frame = +3 Query: 3 VNFDAKSEYDMIQNYKLLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSING 182 VNFDAK+EYDMIQNY++LQ+VF KLK+EKHIEVNRLVKGRPLDNLEFLQWLKRYCDS+NG Sbjct: 60 VNFDAKTEYDMIQNYEVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNG 119 Query: 183 GITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSS--------NGTKQGKVG 338 GI NENYNPVERR KGGK+RNSKGSQK TKSL NN N S +G KQG+ G Sbjct: 120 GIMNENYNPVERRSKGGKDRNSKGSQKTTKSLQANNLHNSASGDTVDLNKMSGPKQGR-G 178 Query: 339 GSMSDGAYSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLPVAA 518 +++ GA + IQAL+ ++ +LKLSVDHLEKERDFYFAKLRDIEILCQ PE+E+LP+ Sbjct: 179 SAVAGGATYSEEIQALSKEVTNLKLSVDHLEKERDFYFAKLRDIEILCQIPEMEDLPMTV 238 Query: 519 AFKKILYAADAKESALPEAQELLTIA 596 A KKILYA DAKESAL EAQE L+ A Sbjct: 239 AIKKILYADDAKESALEEAQEYLSEA 264 >ref|XP_002276213.1| PREDICTED: microtubule-associated protein RP/EB family member 3 [Vitis vinifera] gi|296086393|emb|CBI31982.3| unnamed protein product [Vitis vinifera] Length = 280 Score = 288 bits (736), Expect = 1e-75 Identities = 148/207 (71%), Positives = 166/207 (80%), Gaps = 7/207 (3%) Frame = +3 Query: 3 VNFDAKSEYDMIQNYKLLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSING 182 VNFDAK+EYDMIQNYK+LQEVF KLK+EKHIEVN+LVKGRPLDNLEFLQWLKRYCDS+NG Sbjct: 60 VNFDAKTEYDMIQNYKILQEVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSMNG 119 Query: 183 GITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSSNGT-------KQGKVGG 341 GI NENYNPVERRCKGGKERN KGS K +KSL NN +N S NG +G+ Sbjct: 120 GIMNENYNPVERRCKGGKERNIKGSYKSSKSLQANNLSNV-SDNGICIDESSGPKGRHKS 178 Query: 342 SMSDGAYSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLPVAAA 521 MS GA S IQ L +IADLKLSVD LEKERDFYF KLRDIEILCQ+PE+E+LP++ A Sbjct: 179 EMSGGANSVGEIQGLCQEIADLKLSVDDLEKERDFYFGKLRDIEILCQTPEVEDLPMSMA 238 Query: 522 FKKILYAADAKESALPEAQELLTIAKD 602 KKILYA DAK SAL EAQE++T + D Sbjct: 239 IKKILYAVDAKVSALGEAQEIITKSGD 265 >ref|XP_002330097.1| predicted protein [Populus trichocarpa] gi|222871231|gb|EEF08362.1| predicted protein [Populus trichocarpa] Length = 274 Score = 276 bits (707), Expect = 3e-72 Identities = 142/203 (69%), Positives = 164/203 (80%), Gaps = 5/203 (2%) Frame = +3 Query: 3 VNFDAKSEYDMIQNYKLLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSING 182 VNFDAK+EYDMIQNYK+LQ++F KLK+EKH+EVNRLVKGRPLDNLEFLQWLKRYCDS+NG Sbjct: 60 VNFDAKTEYDMIQNYKILQDIFNKLKIEKHLEVNRLVKGRPLDNLEFLQWLKRYCDSVNG 119 Query: 183 GITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSSNGTKQGKV---GGSMSD 353 GI NENYNP+ERR KGG++RNS+GSQK TKS +N N S K+ G ++ Sbjct: 120 GIMNENYNPLERRSKGGRDRNSRGSQKTTKSQQASNMHNSSSGYTVDLNKMSGRGSAVVG 179 Query: 354 GAYSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLP--VAAAFK 527 A S+ IQAL+ +IAD+KLSVD LEKERDFYFAKLRDIEILCQ+PELE+LP V A K Sbjct: 180 EANSSEEIQALSKEIADMKLSVDLLEKERDFYFAKLRDIEILCQTPELEDLPVRVVVAIK 239 Query: 528 KILYAADAKESALPEAQELLTIA 596 KILYAAD KESAL EAQE L+ A Sbjct: 240 KILYAADTKESALEEAQEYLSEA 262 >ref|XP_003580659.1| PREDICTED: microtubule-associated protein RP/EB family member 1-like isoform 2 [Brachypodium distachyon] Length = 267 Score = 274 bits (701), Expect = 2e-71 Identities = 135/197 (68%), Positives = 165/197 (83%), Gaps = 1/197 (0%) Frame = +3 Query: 3 VNFDAKSEYDMIQNYKLLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSING 182 VNFDAK+EYDMIQNYK+LQEVF KL++ K+IEVN+LVKGRPLDNLEF+QWLKRYCDS+NG Sbjct: 61 VNFDAKTEYDMIQNYKVLQEVFNKLRISKNIEVNKLVKGRPLDNLEFMQWLKRYCDSVNG 120 Query: 183 GITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSS-NGTKQGKVGGSMSDGA 359 GI NENYNPV+RR KGGKERN +GS K +KSL N + S+ +G GKVG ++++ Sbjct: 121 GIMNENYNPVDRRSKGGKERNHRGSNKSSKSLQANRLSTANSADSGPTIGKVGNTVTEEH 180 Query: 360 YSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLPVAAAFKKILY 539 Y T IQ L+++IADLK+SVD EKERDFYF+KLRDIEILCQ PELE+LP+ A +KILY Sbjct: 181 Y-TEQIQQLSEKIADLKVSVDSTEKERDFYFSKLRDIEILCQRPELEHLPMTKAIRKILY 239 Query: 540 AADAKESALPEAQELLT 590 AADAK+S+LPEA E++T Sbjct: 240 AADAKDSSLPEANEIIT 256