BLASTX nr result

ID: Coptis25_contig00024641 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024641
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|2...   292   8e-77
gb|ABK93021.1| unknown [Populus trichocarpa]                          291   2e-76
ref|XP_002276213.1| PREDICTED: microtubule-associated protein RP...   288   1e-75
ref|XP_002330097.1| predicted protein [Populus trichocarpa] gi|2...   276   3e-72
ref|XP_003580659.1| PREDICTED: microtubule-associated protein RP...   274   2e-71

>ref|XP_002318604.1| predicted protein [Populus trichocarpa] gi|222859277|gb|EEE96824.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  292 bits (747), Expect = 8e-77
 Identities = 147/201 (73%), Positives = 167/201 (83%), Gaps = 3/201 (1%)
 Frame = +3

Query: 3   VNFDAKSEYDMIQNYKLLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSING 182
           VNFDAK+EYDMIQNYK+LQ+VF KLK+EKHIEVNRLVKGRPLDNLEFLQWLKRYCDS+NG
Sbjct: 60  VNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNG 119

Query: 183 GITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSSNGTKQGKV---GGSMSD 353
           GI NENYNPVERR KGGK+RNSKGSQK TKSL  NN  N  SS+     K+   G +++ 
Sbjct: 120 GIMNENYNPVERRSKGGKDRNSKGSQKTTKSLQANNLHNSASSDTVDLNKMSGKGSAVAG 179

Query: 354 GAYSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLPVAAAFKKI 533
           GA  +  IQAL+ ++ +LKLSVDHLEKERDFYFAKLRDIEILCQ PE+E+LP+  A KKI
Sbjct: 180 GATYSEEIQALSKEVTNLKLSVDHLEKERDFYFAKLRDIEILCQIPEMEDLPMTVAIKKI 239

Query: 534 LYAADAKESALPEAQELLTIA 596
           LYA DAKESAL EAQE L+ A
Sbjct: 240 LYADDAKESALEEAQEYLSEA 260


>gb|ABK93021.1| unknown [Populus trichocarpa]
          Length = 276

 Score =  291 bits (744), Expect = 2e-76
 Identities = 148/206 (71%), Positives = 169/206 (82%), Gaps = 8/206 (3%)
 Frame = +3

Query: 3   VNFDAKSEYDMIQNYKLLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSING 182
           VNFDAK+EYDMIQNY++LQ+VF KLK+EKHIEVNRLVKGRPLDNLEFLQWLKRYCDS+NG
Sbjct: 60  VNFDAKTEYDMIQNYEVLQDVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSVNG 119

Query: 183 GITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSS--------NGTKQGKVG 338
           GI NENYNPVERR KGGK+RNSKGSQK TKSL  NN  N  S         +G KQG+ G
Sbjct: 120 GIMNENYNPVERRSKGGKDRNSKGSQKTTKSLQANNLHNSASGDTVDLNKMSGPKQGR-G 178

Query: 339 GSMSDGAYSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLPVAA 518
            +++ GA  +  IQAL+ ++ +LKLSVDHLEKERDFYFAKLRDIEILCQ PE+E+LP+  
Sbjct: 179 SAVAGGATYSEEIQALSKEVTNLKLSVDHLEKERDFYFAKLRDIEILCQIPEMEDLPMTV 238

Query: 519 AFKKILYAADAKESALPEAQELLTIA 596
           A KKILYA DAKESAL EAQE L+ A
Sbjct: 239 AIKKILYADDAKESALEEAQEYLSEA 264


>ref|XP_002276213.1| PREDICTED: microtubule-associated protein RP/EB family member 3
           [Vitis vinifera] gi|296086393|emb|CBI31982.3| unnamed
           protein product [Vitis vinifera]
          Length = 280

 Score =  288 bits (736), Expect = 1e-75
 Identities = 148/207 (71%), Positives = 166/207 (80%), Gaps = 7/207 (3%)
 Frame = +3

Query: 3   VNFDAKSEYDMIQNYKLLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSING 182
           VNFDAK+EYDMIQNYK+LQEVF KLK+EKHIEVN+LVKGRPLDNLEFLQWLKRYCDS+NG
Sbjct: 60  VNFDAKTEYDMIQNYKILQEVFNKLKIEKHIEVNKLVKGRPLDNLEFLQWLKRYCDSMNG 119

Query: 183 GITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSSNGT-------KQGKVGG 341
           GI NENYNPVERRCKGGKERN KGS K +KSL  NN +N  S NG         +G+   
Sbjct: 120 GIMNENYNPVERRCKGGKERNIKGSYKSSKSLQANNLSNV-SDNGICIDESSGPKGRHKS 178

Query: 342 SMSDGAYSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLPVAAA 521
            MS GA S   IQ L  +IADLKLSVD LEKERDFYF KLRDIEILCQ+PE+E+LP++ A
Sbjct: 179 EMSGGANSVGEIQGLCQEIADLKLSVDDLEKERDFYFGKLRDIEILCQTPEVEDLPMSMA 238

Query: 522 FKKILYAADAKESALPEAQELLTIAKD 602
            KKILYA DAK SAL EAQE++T + D
Sbjct: 239 IKKILYAVDAKVSALGEAQEIITKSGD 265


>ref|XP_002330097.1| predicted protein [Populus trichocarpa] gi|222871231|gb|EEF08362.1|
           predicted protein [Populus trichocarpa]
          Length = 274

 Score =  276 bits (707), Expect = 3e-72
 Identities = 142/203 (69%), Positives = 164/203 (80%), Gaps = 5/203 (2%)
 Frame = +3

Query: 3   VNFDAKSEYDMIQNYKLLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSING 182
           VNFDAK+EYDMIQNYK+LQ++F KLK+EKH+EVNRLVKGRPLDNLEFLQWLKRYCDS+NG
Sbjct: 60  VNFDAKTEYDMIQNYKILQDIFNKLKIEKHLEVNRLVKGRPLDNLEFLQWLKRYCDSVNG 119

Query: 183 GITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSSNGTKQGKV---GGSMSD 353
           GI NENYNP+ERR KGG++RNS+GSQK TKS   +N  N  S       K+   G ++  
Sbjct: 120 GIMNENYNPLERRSKGGRDRNSRGSQKTTKSQQASNMHNSSSGYTVDLNKMSGRGSAVVG 179

Query: 354 GAYSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLP--VAAAFK 527
            A S+  IQAL+ +IAD+KLSVD LEKERDFYFAKLRDIEILCQ+PELE+LP  V  A K
Sbjct: 180 EANSSEEIQALSKEIADMKLSVDLLEKERDFYFAKLRDIEILCQTPELEDLPVRVVVAIK 239

Query: 528 KILYAADAKESALPEAQELLTIA 596
           KILYAAD KESAL EAQE L+ A
Sbjct: 240 KILYAADTKESALEEAQEYLSEA 262


>ref|XP_003580659.1| PREDICTED: microtubule-associated protein RP/EB family member
           1-like isoform 2 [Brachypodium distachyon]
          Length = 267

 Score =  274 bits (701), Expect = 2e-71
 Identities = 135/197 (68%), Positives = 165/197 (83%), Gaps = 1/197 (0%)
 Frame = +3

Query: 3   VNFDAKSEYDMIQNYKLLQEVFTKLKLEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSING 182
           VNFDAK+EYDMIQNYK+LQEVF KL++ K+IEVN+LVKGRPLDNLEF+QWLKRYCDS+NG
Sbjct: 61  VNFDAKTEYDMIQNYKVLQEVFNKLRISKNIEVNKLVKGRPLDNLEFMQWLKRYCDSVNG 120

Query: 183 GITNENYNPVERRCKGGKERNSKGSQKVTKSLHVNNAANFGSS-NGTKQGKVGGSMSDGA 359
           GI NENYNPV+RR KGGKERN +GS K +KSL  N  +   S+ +G   GKVG ++++  
Sbjct: 121 GIMNENYNPVDRRSKGGKERNHRGSNKSSKSLQANRLSTANSADSGPTIGKVGNTVTEEH 180

Query: 360 YSTSSIQALTDQIADLKLSVDHLEKERDFYFAKLRDIEILCQSPELENLPVAAAFKKILY 539
           Y T  IQ L+++IADLK+SVD  EKERDFYF+KLRDIEILCQ PELE+LP+  A +KILY
Sbjct: 181 Y-TEQIQQLSEKIADLKVSVDSTEKERDFYFSKLRDIEILCQRPELEHLPMTKAIRKILY 239

Query: 540 AADAKESALPEAQELLT 590
           AADAK+S+LPEA E++T
Sbjct: 240 AADAKDSSLPEANEIIT 256


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