BLASTX nr result
ID: Coptis25_contig00024638
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024638 (656 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313030.1| predicted protein [Populus trichocarpa] gi|2... 94 2e-17 ref|XP_002512953.1| conserved hypothetical protein [Ricinus comm... 89 7e-16 ref|XP_002283540.1| PREDICTED: uncharacterized protein LOC100248... 87 2e-15 gb|ADD09610.1| unknown [Trifolium repens] 77 2e-12 ref|XP_002868885.1| predicted protein [Arabidopsis lyrata subsp.... 72 9e-11 >ref|XP_002313030.1| predicted protein [Populus trichocarpa] gi|222849438|gb|EEE86985.1| predicted protein [Populus trichocarpa] Length = 92 Score = 94.4 bits (233), Expect = 2e-17 Identities = 49/87 (56%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +2 Query: 116 TEVSNFDMGALSACLPKKRKGLSTYYTGKSQSFTSLADVHCLEDLKKPEIPQAKKR-KYL 292 TE FDM AL LP+KR GLS YY+GK++SFT +ADV CLEDLKKPE P KKR KY Sbjct: 5 TEQVPFDMDALRTNLPQKRGGLSRYYSGKARSFTCIADVRCLEDLKKPERPDPKKRQKYS 64 Query: 293 RRENTQIASVPCRRISNSNHFAAPFVG 373 R + PCRR+S+S +P VG Sbjct: 65 DRNGLHVPPYPCRRVSSSTQCFSPCVG 91 >ref|XP_002512953.1| conserved hypothetical protein [Ricinus communis] gi|223547964|gb|EEF49456.1| conserved hypothetical protein [Ricinus communis] Length = 129 Score = 89.0 bits (219), Expect = 7e-16 Identities = 47/76 (61%), Positives = 54/76 (71%), Gaps = 1/76 (1%) Frame = +2 Query: 116 TEVSNFDMGALSACLPKKRKGLSTYYTGKSQSFTSLADVHCLEDLKKPEIPQAKKR-KYL 292 +E FDM AL LPKKR GLS YY+GKS+SFT +ADVHCLEDLKK E P AKKR KY Sbjct: 5 SETMTFDMNALRNNLPKKR-GLSRYYSGKSRSFTCMADVHCLEDLKKKEHPDAKKRKKYS 63 Query: 293 RRENTQIASVPCRRIS 340 R + + PCRRI+ Sbjct: 64 ERRDLHVPPYPCRRIA 79 >ref|XP_002283540.1| PREDICTED: uncharacterized protein LOC100248701 [Vitis vinifera] gi|297744434|emb|CBI37696.3| unnamed protein product [Vitis vinifera] Length = 91 Score = 87.4 bits (215), Expect = 2e-15 Identities = 48/88 (54%), Positives = 60/88 (68%), Gaps = 3/88 (3%) Frame = +2 Query: 119 EVSN--FDMGALSACLPKKRKGLSTYYTGKSQSFTSLADVHCLEDLKKPEIPQAKKR-KY 289 E+ N FDMGAL LP+KR GLS YY+GK++SFTS+ADVHCLEDLKK E P AKKR K+ Sbjct: 4 EIENLCFDMGALRTNLPQKR-GLSRYYSGKARSFTSIADVHCLEDLKKKEHPAAKKRKKH 62 Query: 290 LRRENTQIASVPCRRISNSNHFAAPFVG 373 +R++ Q A C R+ P +G Sbjct: 63 SKRQDIQAAPYLCGRVPGGTQCTTPCLG 90 >gb|ADD09610.1| unknown [Trifolium repens] Length = 93 Score = 77.4 bits (189), Expect = 2e-12 Identities = 41/88 (46%), Positives = 53/88 (60%), Gaps = 4/88 (4%) Frame = +2 Query: 119 EVSN--FDMGALSACLPKKRKGLSTYYTGKSQSFTSLADVHCLEDLKKPEIPQAKKRKYL 292 E+ N F+MG+L +KR GLS YY+GK++SF + DVH +EDLKKP+ P AKKRK Sbjct: 4 EIENMIFNMGSLGTSFSQKRGGLSRYYSGKARSFVCMEDVHSVEDLKKPKHPDAKKRKKQ 63 Query: 293 --RRENTQIASVPCRRISNSNHFAAPFV 370 R E + PCRR + PFV Sbjct: 64 SHRNEFINLNPYPCRRAPSCTQLTTPFV 91 >ref|XP_002868885.1| predicted protein [Arabidopsis lyrata subsp. lyrata] gi|297314721|gb|EFH45144.1| predicted protein [Arabidopsis lyrata subsp. lyrata] Length = 108 Score = 72.0 bits (175), Expect = 9e-11 Identities = 43/100 (43%), Positives = 57/100 (57%), Gaps = 20/100 (20%) Frame = +2 Query: 131 FDMGALSACLPKKRKGLSTYYTGKSQSFTSLADVHCLEDLKKP--------EIPQAKKRK 286 FDMG L LPKKR GLS YY+GK++SF ++DV CLEDLKKP + KKRK Sbjct: 9 FDMGELRNNLPKKR-GLSRYYSGKARSFICISDVKCLEDLKKPTQTFDDDDDDEAYKKRK 67 Query: 287 YLRRE------------NTQIASVPCRRISNSNHFAAPFV 370 ++ N ++ PCRR+S+S H ++P V Sbjct: 68 KKNKQSSSSSFSAAINSNVNFSNYPCRRVSSSTHCSSPCV 107