BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024635
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t...   163   2e-38
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi...   162   2e-38
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]   153   1e-35
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi...   150   8e-35
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]   149   3e-34

>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1491

 Score =  163 bits (412), Expect = 2e-38
 Identities = 84/165 (50%), Positives = 105/165 (63%)
 Frame = +3

Query: 9   KLSEHLILENVLYVPALNCNLLSVSQFLEK*KFIFLFTDKLCTIQDRSLRNLIGTGEQCN 188
           KLSE + L NVLYVPALNC+L+SVS+ +++ K + LFTD +C +QDR  R LIGTGE+ +
Sbjct: 429 KLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERD 488

Query: 189 GVYLFRLVRCIQANRSTVADSALVWHRRLGHPSMKVVRSLPGVLXXXXXXXXXXXXYQVC 368
           GVY          ++  V     +WH+RLGHPS  V+ SLP  L              VC
Sbjct: 489 GVYYLTDAATTTVHKVDVTTDHALWHQRLGHPSFSVLSSLP--LFSGSSCSVSSRSCDVC 546

Query: 369 FLAKQPRNSFPLSTNKASDLFDLIHCDIWGAYRVASSCGVHYFLT 503
           F AKQ R  FP S+NK++D F LIHCD+WG YRV SSCG  YFLT
Sbjct: 547 FRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLT 591


>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  162 bits (411), Expect = 2e-38
 Identities = 83/165 (50%), Positives = 105/165 (63%)
 Frame = +3

Query: 9   KLSEHLILENVLYVPALNCNLLSVSQFLEK*KFIFLFTDKLCTIQDRSLRNLIGTGEQCN 188
           KLSE + L NVLYVPALNC+L+SVS+ +++ K + LFTD +C +QDR  R LIGTGE+ +
Sbjct: 429 KLSETVSLSNVLYVPALNCSLISVSKLVKQIKCLALFTDTICVLQDRFSRTLIGTGEERD 488

Query: 189 GVYLFRLVRCIQANRSTVADSALVWHRRLGHPSMKVVRSLPGVLXXXXXXXXXXXXYQVC 368
           GVY          ++  +     +WH+RLGHPS  V+ SLP  L              VC
Sbjct: 489 GVYYLTDAATTTVHKVDITTDHALWHQRLGHPSFSVLSSLP--LFSGSSCSVSSRSCDVC 546

Query: 369 FLAKQPRNSFPLSTNKASDLFDLIHCDIWGAYRVASSCGVHYFLT 503
           F AKQ R  FP S+NK++D F LIHCD+WG YRV SSCG  YFLT
Sbjct: 547 FRAKQTREVFPDSSNKSTDCFSLIHCDVWGPYRVPSSCGAVYFLT 591


>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
          Length = 1109

 Score =  153 bits (387), Expect = 1e-35
 Identities = 80/166 (48%), Positives = 102/166 (61%)
 Frame = +3

Query: 6   IKLSEHLILENVLYVPALNCNLLSVSQFLEK*KFIFLFTDKLCTIQDRSLRNLIGTGEQC 185
           + L E L L +VL+VP L CNL+ V Q L+    +  FT+K+C IQDR  R LIG GEQC
Sbjct: 239 VTLGEKLKLRHVLFVPKLKCNLIFVLQLLDDSNLVVQFTNKICAIQDRISRMLIGVGEQC 298

Query: 186 NGVYLFRLVRCIQANRSTVADSALVWHRRLGHPSMKVVRSLPGVLXXXXXXXXXXXXYQV 365
            G+Y  + V  I+A ++T   S  +WHRR+GHPS +VV  +  V               +
Sbjct: 299 EGLYFLKGVAPIRAYKTTSIASYELWHRRMGHPSSRVVDLIXEVDSVGRNDGXKNKFCDI 358

Query: 366 CFLAKQPRNSFPLSTNKASDLFDLIHCDIWGAYRVASSCGVHYFLT 503
           CF A+Q R  F  S NKA + FDLIHCD+WGAYRV +SCG  YFLT
Sbjct: 359 CFRAQQTREMFFSSDNKAKECFDLIHCDLWGAYRVPASCGGIYFLT 404


>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1501

 Score =  150 bits (380), Expect = 8e-35
 Identities = 78/166 (46%), Positives = 101/166 (60%)
 Frame = +3

Query: 6   IKLSEHLILENVLYVPALNCNLLSVSQFLEK*KFIFLFTDKLCTIQDRSLRNLIGTGEQC 185
           + LS  + L NVL+VP+LNC L+SVS+ L++ + +  FTD LC +QDRS + LIG+GE+ 
Sbjct: 445 LTLSNTVSLTNVLFVPSLNCTLISVSKLLKQTQCLATFTDTLCFLQDRSSKTLIGSGEER 504

Query: 186 NGVYLFRLVRCIQANRSTVADSALVWHRRLGHPSMKVVRSLPGVLXXXXXXXXXXXXYQV 365
            GVY    V   + + + V     +WH+RLGHPS  V+ SLP  L              V
Sbjct: 505 GGVYYLTDVTPAKIHTANVDSDQALWHQRLGHPSFSVLSSLP--LFSKTSSTVTSHSCDV 562

Query: 366 CFLAKQPRNSFPLSTNKASDLFDLIHCDIWGAYRVASSCGVHYFLT 503
           CF AKQ R  FP S NK  + F LIHCD+WG YRV +SCG  YFLT
Sbjct: 563 CFRAKQTREVFPESINKTEECFSLIHCDVWGPYRVPASCGAVYFLT 608


>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score =  149 bits (375), Expect = 3e-34
 Identities = 76/166 (45%), Positives = 103/166 (62%)
 Frame = +3

Query: 6   IKLSEHLILENVLYVPALNCNLLSVSQFLEK*KFIFLFTDKLCTIQDRSLRNLIGTGEQC 185
           +KLS+ L L+NVLYVP+L CNL+S+ Q L++  +I  FTD  C IQDR+ RN IG G+  
Sbjct: 304 VKLSKDLCLKNVLYVPSLKCNLISIGQLLKEKDYIVTFTDSFCVIQDRTSRNPIGVGKLR 363

Query: 186 NGVYLFRLVRCIQANRSTVADSALVWHRRLGHPSMKVVRSLPGVLXXXXXXXXXXXXYQV 365
           NGVY ++ ++  + N   V +   +WHRRLGHPS +V+ S+   L               
Sbjct: 364 NGVYYYKPLQGEKVNAVKVEEKYELWHRRLGHPSDRVLASIHS-LGNNVMKGIEDYVCDS 422

Query: 366 CFLAKQPRNSFPLSTNKASDLFDLIHCDIWGAYRVASSCGVHYFLT 503
           C   KQ RNSF LS  +A ++F+LIH DIWG YR  ++ G HYFLT
Sbjct: 423 CCRGKQVRNSFQLSNKRAFEIFNLIHVDIWGPYRTPTTSGAHYFLT 468