BLASTX nr result

ID: Coptis25_contig00024627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024627
         (860 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240177.1| uncharacterized protein LOC100805734 [Glycin...   214   2e-53
ref|XP_002264651.1| PREDICTED: zinc finger protein-like 1 [Vitis...   209   5e-52
ref|XP_004136939.1| PREDICTED: zinc finger protein-like 1-like [...   207   2e-51
ref|XP_002313174.1| predicted protein [Populus trichocarpa] gi|2...   205   1e-50
ref|NP_001242749.1| uncharacterized protein LOC100775639 [Glycin...   202   6e-50

>ref|NP_001240177.1| uncharacterized protein LOC100805734 [Glycine max]
           gi|255634620|gb|ACU17672.1| unknown [Glycine max]
          Length = 337

 Score =  214 bits (545), Expect = 2e-53
 Identities = 101/125 (80%), Positives = 112/125 (89%)
 Frame = -1

Query: 860 PGATTRKGAYHVERQNSEISYYADDEDGNQKKYTRRGPFRHKFLRALLPFWSSAMPTLPV 681
           PGATTRKG+ HVERQNSEISYYADDED N+KKYT+RGPF HKFLRALLPFWS+A+PTLPV
Sbjct: 213 PGATTRKGSVHVERQNSEISYYADDEDANRKKYTKRGPFHHKFLRALLPFWSTALPTLPV 272

Query: 680 TAPPRKETSNLDDIPEGRVRHQRSSRIDPRKILLIMAIMACMATMGILYYRLAQRGLGEN 501
           TAPPRK+ SN  +  EGR RHQRSSR+DPRKILL++AIMACMATMGILYYRLAQRG G+ 
Sbjct: 273 TAPPRKDASNAAETSEGRTRHQRSSRMDPRKILLLIAIMACMATMGILYYRLAQRGPGDE 332

Query: 500 QSNDE 486
             NDE
Sbjct: 333 LRNDE 337


>ref|XP_002264651.1| PREDICTED: zinc finger protein-like 1 [Vitis vinifera]
           gi|296083059|emb|CBI22463.3| unnamed protein product
           [Vitis vinifera]
          Length = 359

 Score =  209 bits (533), Expect = 5e-52
 Identities = 102/128 (79%), Positives = 112/128 (87%), Gaps = 1/128 (0%)
 Frame = -1

Query: 860 PGATTRKGAYHVERQNSEISYYADD-EDGNQKKYTRRGPFRHKFLRALLPFWSSAMPTLP 684
           PGATTRK   +VERQNSEISYYADD EDG  KKYTRRGPF HKFLRALLPFWSSA+PTLP
Sbjct: 232 PGATTRKSGLYVERQNSEISYYADDDEDGTHKKYTRRGPFHHKFLRALLPFWSSALPTLP 291

Query: 683 VTAPPRKETSNLDDIPEGRVRHQRSSRIDPRKILLIMAIMACMATMGILYYRLAQRGLGE 504
           VTAP RK+ SN DD+ E R RHQRSSR+DPRK+LLI+AIMACMATMGILYYRLAQRGLG+
Sbjct: 292 VTAPSRKDASNADDVLESRPRHQRSSRMDPRKVLLIIAIMACMATMGILYYRLAQRGLGK 351

Query: 503 NQSNDEQR 480
              +DEQ+
Sbjct: 352 EMPDDEQQ 359


>ref|XP_004136939.1| PREDICTED: zinc finger protein-like 1-like [Cucumis sativus]
           gi|449478770|ref|XP_004155414.1| PREDICTED: zinc finger
           protein-like 1-like [Cucumis sativus]
          Length = 359

 Score =  207 bits (527), Expect = 2e-51
 Identities = 98/127 (77%), Positives = 112/127 (88%)
 Frame = -1

Query: 860 PGATTRKGAYHVERQNSEISYYADDEDGNQKKYTRRGPFRHKFLRALLPFWSSAMPTLPV 681
           P ATTRKGA   +RQNSEISYYADDEDGN+KKY RRGPF+HKFLRALLPFWS+A+PTLPV
Sbjct: 228 PVATTRKGAVSYDRQNSEISYYADDEDGNRKKYVRRGPFKHKFLRALLPFWSTALPTLPV 287

Query: 680 TAPPRKETSNLDDIPEGRVRHQRSSRIDPRKILLIMAIMACMATMGILYYRLAQRGLGEN 501
           TAPPRK+  N +D+ EGRVRHQR SR+DPRKILLI+AIMAC+ATMGILYYRL QR +GE 
Sbjct: 288 TAPPRKDAPNANDVNEGRVRHQRPSRMDPRKILLIIAIMACLATMGILYYRLVQRDMGEE 347

Query: 500 QSNDEQR 480
             +DEQ+
Sbjct: 348 FVDDEQQ 354


>ref|XP_002313174.1| predicted protein [Populus trichocarpa] gi|222849582|gb|EEE87129.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  205 bits (521), Expect = 1e-50
 Identities = 97/127 (76%), Positives = 110/127 (86%)
 Frame = -1

Query: 860 PGATTRKGAYHVERQNSEISYYADDEDGNQKKYTRRGPFRHKFLRALLPFWSSAMPTLPV 681
           P ATTRK    VERQNSE+SY+ADDEDGN KKY+RRGPFRHKFLRALLPFWSSA+PTLPV
Sbjct: 204 PVATTRKVGVQVERQNSELSYFADDEDGNHKKYSRRGPFRHKFLRALLPFWSSALPTLPV 263

Query: 680 TAPPRKETSNLDDIPEGRVRHQRSSRIDPRKILLIMAIMACMATMGILYYRLAQRGLGEN 501
           TAPPRK+  N DD  EGR R+Q+ SR+DPRKILL++AIMACMATMGILYYR+AQRG GE 
Sbjct: 264 TAPPRKDALNADDASEGRTRNQKHSRMDPRKILLMIAIMACMATMGILYYRIAQRGFGEE 323

Query: 500 QSNDEQR 480
           Q  DE++
Sbjct: 324 QPGDEKQ 330


>ref|NP_001242749.1| uncharacterized protein LOC100775639 [Glycine max]
           gi|255642399|gb|ACU21463.1| unknown [Glycine max]
          Length = 338

 Score =  202 bits (515), Expect = 6e-50
 Identities = 99/126 (78%), Positives = 109/126 (86%), Gaps = 1/126 (0%)
 Frame = -1

Query: 860 PGATTRKGAYHVERQNSEISYYADDEDGNQKKYTRRGPFRHKFLRALLPFWSSAMPTLPV 681
           PGATTRKG  HVERQNSEISYYADDED N+KKYT+RGPF HKFLRALLPFWS+A+PTLPV
Sbjct: 213 PGATTRKGPVHVERQNSEISYYADDEDANRKKYTKRGPFHHKFLRALLPFWSTALPTLPV 272

Query: 680 TAPPRKETSN-LDDIPEGRVRHQRSSRIDPRKILLIMAIMACMATMGILYYRLAQRGLGE 504
           TAPPRK+ SN   +  EGR RHQRSSR+DPRKILL++AIMAC ATMGILY RLAQRG G+
Sbjct: 273 TAPPRKDASNAAAETSEGRTRHQRSSRMDPRKILLLIAIMACTATMGILYCRLAQRGPGD 332

Query: 503 NQSNDE 486
              NDE
Sbjct: 333 ELLNDE 338


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