BLASTX nr result

ID: Coptis25_contig00024622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024622
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270534.1| PREDICTED: zinc finger protein 7-like [Vitis...   229   1e-57
ref|XP_002279158.1| PREDICTED: zinc finger protein 7-like [Vitis...   219   6e-55
emb|CAN77233.1| hypothetical protein VITISV_001090 [Vitis vinifera]   219   6e-55
ref|XP_002298757.1| predicted protein [Populus trichocarpa] gi|2...   210   5e-52
ref|XP_002313159.1| predicted protein [Populus trichocarpa] gi|2...   201   2e-49

>ref|XP_002270534.1| PREDICTED: zinc finger protein 7-like [Vitis vinifera]
          Length = 189

 Score =  229 bits (583), Expect = 1e-57
 Identities = 112/182 (61%), Positives = 138/182 (75%)
 Frame = -1

Query: 901 MIFQKEEEPNKISVNSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDSASK 722
           MIF  E    + SVN    G +  ++ D    E+N  EWL+LSLGRN P  A DSD  S+
Sbjct: 1   MIFHGEGA--ETSVNKQQGGLRISENGDEGAEEDNPGEWLNLSLGRNLPSTALDSDPQSR 58

Query: 721 PTSNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAVRRYQSQRMVAMMGLPLNTPIVRSL 542
           PTS+K+FSCNFCMRKF+SSQALGGHQNAHKRERGA RRYQS RM+AMMGLP+NTPI RSL
Sbjct: 59  PTSSKVFSCNFCMRKFYSSQALGGHQNAHKRERGAARRYQSHRMMAMMGLPMNTPI-RSL 117

Query: 541 GIQAHSLIHKPSKEGTGMVARFDDSKSRFGSAWSPFTIEEAMDMMWPGSFHVNPQESKQQ 362
           G++ HSL+ KP+++GT +VARFDDS + FG  W+PFT+EE MD+MWPGS+ +  Q S+Q 
Sbjct: 118 GVRPHSLVQKPNRDGTAIVARFDDSNTGFGMTWTPFTLEETMDVMWPGSYRLEQQPSEQT 177

Query: 361 PE 356
            E
Sbjct: 178 SE 179


>ref|XP_002279158.1| PREDICTED: zinc finger protein 7-like [Vitis vinifera]
          Length = 193

 Score =  219 bits (559), Expect = 6e-55
 Identities = 107/184 (58%), Positives = 131/184 (71%), Gaps = 3/184 (1%)
 Frame = -1

Query: 904 LMIFQKEEEPNKISVNSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDSAS 725
           + I Q+EEE N++S N+    SK+   D+    ++N  EWL LSL RN+    GD D  S
Sbjct: 1   MTISQREEEANEVSSNNQDAESKTRSDDEKTSGDDNLGEWLSLSLSRNEAFTTGDGDPQS 60

Query: 724 KPTSNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAVRRYQSQR-MVAMMGLPLNTPIVR 548
           KP  NKIFSCNFCMRKFFSSQALGGHQNAHKRERGA +RYQS R M+A MG PLN+  +R
Sbjct: 61  KPAGNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSHRMMMATMGFPLNSLTIR 120

Query: 547 SLGIQAHSLIHKPSKEGTGMVARFDDSKSRFGSAWSPFTIEEAMDMMWPGSFHVN--PQE 374
           SLG Q HSL HKP +EGT + ARF+D  + F  AW+PF +EEAMD +WPGSFHV+  P +
Sbjct: 121 SLGAQPHSLAHKPGREGTEVAARFNDPNTGFRMAWTPFVMEEAMDSIWPGSFHVDKLPSQ 180

Query: 373 SKQQ 362
           +  Q
Sbjct: 181 ASDQ 184


>emb|CAN77233.1| hypothetical protein VITISV_001090 [Vitis vinifera]
          Length = 248

 Score =  219 bits (559), Expect = 6e-55
 Identities = 107/184 (58%), Positives = 131/184 (71%), Gaps = 3/184 (1%)
 Frame = -1

Query: 904 LMIFQKEEEPNKISVNSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDSAS 725
           + I Q+EEE N++S N+    SK+   D+    ++N  EWL LSL RN+    GD D  S
Sbjct: 1   MTISQREEEANEVSSNNQDAESKTRSDDEKTSGDDNLGEWLSLSLSRNEAFTTGDGDPQS 60

Query: 724 KPTSNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAVRRYQSQR-MVAMMGLPLNTPIVR 548
           KP  NKIFSCNFCMRKFFSSQALGGHQNAHKRERGA +RYQS R M+A MG PLN+  +R
Sbjct: 61  KPAGNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAAKRYQSHRMMMATMGFPLNSLTIR 120

Query: 547 SLGIQAHSLIHKPSKEGTGMVARFDDSKSRFGSAWSPFTIEEAMDMMWPGSFHVN--PQE 374
           SLG Q HSL HKP +EGT + ARF+D  + F  AW+PF +EEAMD +WPGSFHV+  P +
Sbjct: 121 SLGAQPHSLAHKPGREGTEVAARFNDPNTGFRMAWTPFVMEEAMDSIWPGSFHVDKLPSQ 180

Query: 373 SKQQ 362
           +  Q
Sbjct: 181 ASDQ 184


>ref|XP_002298757.1| predicted protein [Populus trichocarpa] gi|222846015|gb|EEE83562.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  210 bits (534), Expect = 5e-52
 Identities = 97/183 (53%), Positives = 132/183 (72%), Gaps = 2/183 (1%)
 Frame = -1

Query: 901 MIFQKEEEPNKISVNSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDSASK 722
           MIFQ  EE  +I          + ++ +    +NN  EWL+LSLG N P  AGD DS S+
Sbjct: 57  MIFQ--EEAIEIKTLKHQNEMLNSNNSNEGYDDNNPGEWLNLSLGGNSPSTAGDYDSQSR 114

Query: 721 PTSNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAVRRYQSQRMVAMMGLPLNTPIVRSL 542
           PTS+K+FSCNFC RKFFSSQALGGHQNAHKRERGA RRY SQRM+ +MGLP+N+P+ RSL
Sbjct: 115 PTSSKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYHSQRMMTIMGLPVNSPMARSL 174

Query: 541 GIQAHSLIHKPSKEGTGMVARFDDSKSRFGSAWSPFTIEEAMDMMWPGSFHVNPQ--ESK 368
           G++ H+L+HKP+++GT +  RF+++   F  +W PFT+++  D+ WPGSF ++PQ  E+ 
Sbjct: 175 GVRPHTLVHKPNRDGTAIAGRFNEASPGFDMSWMPFTVDDTTDLTWPGSFRLDPQPPETS 234

Query: 367 QQP 359
            +P
Sbjct: 235 SEP 237


>ref|XP_002313159.1| predicted protein [Populus trichocarpa] gi|222849567|gb|EEE87114.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  201 bits (512), Expect = 2e-49
 Identities = 93/175 (53%), Positives = 125/175 (71%)
 Frame = -1

Query: 901 MIFQKEEEPNKISVNSFHTGSKSGDSDDMRVSENNSEEWLDLSLGRNDPLIAGDSDSASK 722
           MIFQ  EE  +I  +          + +   ++NN  EWL+L LG N P  AGD DS S+
Sbjct: 1   MIFQ--EEAIEIKTSKHQNEIVGNHNSNEGYNDNNPGEWLNLRLGGNSPSTAGDYDSQSR 58

Query: 721 PTSNKIFSCNFCMRKFFSSQALGGHQNAHKRERGAVRRYQSQRMVAMMGLPLNTPIVRSL 542
           PTS+K+FSCNFC RKFFSSQALGGHQNAHKRERGA RRY SQRM+ MMGLP+N+P+ RSL
Sbjct: 59  PTSSKVFSCNFCRRKFFSSQALGGHQNAHKRERGAARRYHSQRMMTMMGLPINSPMARSL 118

Query: 541 GIQAHSLIHKPSKEGTGMVARFDDSKSRFGSAWSPFTIEEAMDMMWPGSFHVNPQ 377
           G++ H+L+HKP+++GT +  RF+++   F  +W PF +++  D+ WPGSF ++ Q
Sbjct: 119 GVRPHALVHKPTRDGTPIGGRFNEANPGFVMSWMPFALDDTADLTWPGSFRLDSQ 173


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