BLASTX nr result

ID: Coptis25_contig00024618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024618
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328035.1| predicted protein [Populus trichocarpa] gi|2...   132   2e-29
ref|NP_001233892.1| DnaJ like protein [Solanum lycopersicum] gi|...   132   3e-29
gb|AAF05720.1|AF191497_1 DnaJ-like protein [Nicotiana tabacum]        130   1e-28
gb|AEE92843.1| Potato virus X SL1 RNA interacting protein 2 [Nic...   130   1e-28
gb|AFW81115.1| hypothetical protein ZEAMMB73_033918 [Zea mays]        129   2e-28

>ref|XP_002328035.1| predicted protein [Populus trichocarpa] gi|222837444|gb|EEE75823.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score =  132 bits (333), Expect = 2e-29
 Identities = 72/108 (66%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
 Frame = -3

Query: 466 YYKVLGVDRNAKDDDLKKAYRKLAMKWHPDXXXXXXXXXXXXXKQISEAYDVLSDGQKRA 287
           YYKVL VD+ AKDDDLKKAYRKLAMKWHPD             KQISEAYDVLSD QKRA
Sbjct: 5   YYKVLQVDKTAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRA 64

Query: 286 VYDQYGEEGLKG-VPPPGTGYXXXXXXXXXXXXXXXSFRFNPRNPDDI 146
           VYDQYGEEGLKG VPPPG G                SFRFNPRN DDI
Sbjct: 65  VYDQYGEEGLKGQVPPPGAGGAGPGASFFSTGDGPTSFRFNPRNADDI 112


>ref|NP_001233892.1| DnaJ like protein [Solanum lycopersicum]
           gi|11863723|emb|CAC16088.2| DnaJ like protein [Solanum
           lycopersicum]
          Length = 342

 Score =  132 bits (332), Expect = 3e-29
 Identities = 71/108 (65%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
 Frame = -3

Query: 466 YYKVLGVDRNAKDDDLKKAYRKLAMKWHPDXXXXXXXXXXXXXKQISEAYDVLSDGQKRA 287
           YYKVLGVD+NA DDDLKKAYRKLAMKWHPD             KQISEAYDVLSD QK+A
Sbjct: 5   YYKVLGVDKNATDDDLKKAYRKLAMKWHPDKNPQNKKEAEAKFKQISEAYDVLSDSQKKA 64

Query: 286 VYDQYGEEGLK-GVPPPGTGYXXXXXXXXXXXXXXXSFRFNPRNPDDI 146
           VYDQYGEEGLK GVPPPG G                SFRFN RN DDI
Sbjct: 65  VYDQYGEEGLKGGVPPPGAGGPGAGSTYFSTGDGPTSFRFNSRNADDI 112


>gb|AAF05720.1|AF191497_1 DnaJ-like protein [Nicotiana tabacum]
          Length = 342

 Score =  130 bits (327), Expect = 1e-28
 Identities = 70/108 (64%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
 Frame = -3

Query: 466 YYKVLGVDRNAKDDDLKKAYRKLAMKWHPDXXXXXXXXXXXXXKQISEAYDVLSDGQKRA 287
           YYKVLGVD+NA DDDLKKAYRKLAMKWHPD             KQISEAYDVLSD QKRA
Sbjct: 5   YYKVLGVDKNATDDDLKKAYRKLAMKWHPDKNPNNKKAAEAKFKQISEAYDVLSDSQKRA 64

Query: 286 VYDQYGEEGLK-GVPPPGTGYXXXXXXXXXXXXXXXSFRFNPRNPDDI 146
           VYDQYGE+GLK GVPPPG G                SFRFN R+ DDI
Sbjct: 65  VYDQYGEDGLKGGVPPPGAGGPGGGSPFFSTGEGPQSFRFNTRSADDI 112


>gb|AEE92843.1| Potato virus X SL1 RNA interacting protein 2 [Nicotiana
           benthamiana]
          Length = 342

 Score =  130 bits (327), Expect = 1e-28
 Identities = 70/108 (64%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
 Frame = -3

Query: 466 YYKVLGVDRNAKDDDLKKAYRKLAMKWHPDXXXXXXXXXXXXXKQISEAYDVLSDGQKRA 287
           YYKVLGVD+NA DDDLKKAYRKLAMKWHPD             KQISEAYDVLSD QKRA
Sbjct: 5   YYKVLGVDKNATDDDLKKAYRKLAMKWHPDKNPNNKKAAEAKFKQISEAYDVLSDSQKRA 64

Query: 286 VYDQYGEEGLK-GVPPPGTGYXXXXXXXXXXXXXXXSFRFNPRNPDDI 146
           VYDQYGE+GLK GVPPPG G                SFRFN R+ DDI
Sbjct: 65  VYDQYGEDGLKGGVPPPGAGGPGGGSPFFSTGEGPQSFRFNTRSADDI 112


>gb|AFW81115.1| hypothetical protein ZEAMMB73_033918 [Zea mays]
          Length = 468

 Score =  129 bits (325), Expect = 2e-28
 Identities = 70/108 (64%), Positives = 72/108 (66%), Gaps = 1/108 (0%)
 Frame = -3

Query: 466 YYKVLGVDRNAKDDDLKKAYRKLAMKWHPDXXXXXXXXXXXXXKQISEAYDVLSDGQKRA 287
           YYK+LGVD+ A DDDLKKAYRKLAMKWHPD             KQISEAYDVLSD QKRA
Sbjct: 122 YYKILGVDKGATDDDLKKAYRKLAMKWHPDKNPNNKKEAENKFKQISEAYDVLSDPQKRA 181

Query: 286 VYDQYGEEGLKG-VPPPGTGYXXXXXXXXXXXXXXXSFRFNPRNPDDI 146
           VYDQYGEEGLKG VPPPG G                 FRFNPRN DDI
Sbjct: 182 VYDQYGEEGLKGQVPPPGAG-GAGSTFFSTGGDGPTVFRFNPRNADDI 228


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