BLASTX nr result
ID: Coptis25_contig00024610
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00024610 (401 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002873830.1| hypothetical protein ARALYDRAFT_909742 [Arab... 122 3e-26 gb|ABK28123.1| unknown [Arabidopsis thaliana] 122 3e-26 gb|ABF59464.1| unknown protein [Arabidopsis thaliana] 122 3e-26 ref|XP_003569447.1| PREDICTED: uncharacterized protein LOC100828... 120 2e-25 gb|AAG40345.1|AF324993_1 AT5g17460 [Arabidopsis thaliana] 119 3e-25 >ref|XP_002873830.1| hypothetical protein ARALYDRAFT_909742 [Arabidopsis lyrata subsp. lyrata] gi|297319667|gb|EFH50089.1| hypothetical protein ARALYDRAFT_909742 [Arabidopsis lyrata subsp. lyrata] Length = 73 Score = 122 bits (306), Expect = 3e-26 Identities = 55/73 (75%), Positives = 59/73 (80%) Frame = +1 Query: 127 MSFPSCIQCGTRSNPCRCKVVGPTLGXXXXXXXXXXEWPIGAVVYIFRHMKGRRIMGHPA 306 M FP+CIQCGTR NPCRCKVVGPTLG EWP+GAVVYIF+H KGRRIMGHPA Sbjct: 1 MVFPACIQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPA 60 Query: 307 RVVYPKVSRAIPI 345 R VYPKVSR+IPI Sbjct: 61 RRVYPKVSRSIPI 73 >gb|ABK28123.1| unknown [Arabidopsis thaliana] Length = 74 Score = 122 bits (306), Expect = 3e-26 Identities = 54/73 (73%), Positives = 59/73 (80%) Frame = +1 Query: 127 MSFPSCIQCGTRSNPCRCKVVGPTLGXXXXXXXXXXEWPIGAVVYIFRHMKGRRIMGHPA 306 M FP+C+QCGTR NPCRCKVVGPTLG EWP+GAVVYIF+H KGRRIMGHPA Sbjct: 1 MVFPACVQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPA 60 Query: 307 RVVYPKVSRAIPI 345 R VYPKVSR+IPI Sbjct: 61 RKVYPKVSRSIPI 73 >gb|ABF59464.1| unknown protein [Arabidopsis thaliana] Length = 73 Score = 122 bits (306), Expect = 3e-26 Identities = 54/73 (73%), Positives = 59/73 (80%) Frame = +1 Query: 127 MSFPSCIQCGTRSNPCRCKVVGPTLGXXXXXXXXXXEWPIGAVVYIFRHMKGRRIMGHPA 306 M FP+C+QCGTR NPCRCKVVGPTLG EWP+GAVVYIF+H KGRRIMGHPA Sbjct: 1 MVFPACVQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPA 60 Query: 307 RVVYPKVSRAIPI 345 R VYPKVSR+IPI Sbjct: 61 RKVYPKVSRSIPI 73 >ref|XP_003569447.1| PREDICTED: uncharacterized protein LOC100828693 [Brachypodium distachyon] Length = 74 Score = 120 bits (300), Expect = 2e-25 Identities = 52/70 (74%), Positives = 58/70 (82%) Frame = +1 Query: 136 PSCIQCGTRSNPCRCKVVGPTLGXXXXXXXXXXEWPIGAVVYIFRHMKGRRIMGHPARVV 315 P+C+QCGTRSNPCRCKVVGPTLG EWP+GA VY+FRH KGRRIMGHPARVV Sbjct: 5 PACVQCGTRSNPCRCKVVGPTLGFVAFLVTGVVEWPLGAAVYLFRHRKGRRIMGHPARVV 64 Query: 316 YPKVSRAIPI 345 YP+V+RAIPI Sbjct: 65 YPRVTRAIPI 74 >gb|AAG40345.1|AF324993_1 AT5g17460 [Arabidopsis thaliana] Length = 73 Score = 119 bits (298), Expect = 3e-25 Identities = 53/73 (72%), Positives = 58/73 (79%) Frame = +1 Query: 127 MSFPSCIQCGTRSNPCRCKVVGPTLGXXXXXXXXXXEWPIGAVVYIFRHMKGRRIMGHPA 306 M FP+C+QCGTR NPCRCKVV PTLG EWP+GAVVYIF+H KGRRIMGHPA Sbjct: 1 MVFPACVQCGTRQNPCRCKVVEPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPA 60 Query: 307 RVVYPKVSRAIPI 345 R VYPKVSR+IPI Sbjct: 61 RKVYPKVSRSIPI 73