BLASTX nr result

ID: Coptis25_contig00024610 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024610
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873830.1| hypothetical protein ARALYDRAFT_909742 [Arab...   122   3e-26
gb|ABK28123.1| unknown [Arabidopsis thaliana]                         122   3e-26
gb|ABF59464.1| unknown protein [Arabidopsis thaliana]                 122   3e-26
ref|XP_003569447.1| PREDICTED: uncharacterized protein LOC100828...   120   2e-25
gb|AAG40345.1|AF324993_1 AT5g17460 [Arabidopsis thaliana]             119   3e-25

>ref|XP_002873830.1| hypothetical protein ARALYDRAFT_909742 [Arabidopsis lyrata subsp.
           lyrata] gi|297319667|gb|EFH50089.1| hypothetical protein
           ARALYDRAFT_909742 [Arabidopsis lyrata subsp. lyrata]
          Length = 73

 Score =  122 bits (306), Expect = 3e-26
 Identities = 55/73 (75%), Positives = 59/73 (80%)
 Frame = +1

Query: 127 MSFPSCIQCGTRSNPCRCKVVGPTLGXXXXXXXXXXEWPIGAVVYIFRHMKGRRIMGHPA 306
           M FP+CIQCGTR NPCRCKVVGPTLG          EWP+GAVVYIF+H KGRRIMGHPA
Sbjct: 1   MVFPACIQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPA 60

Query: 307 RVVYPKVSRAIPI 345
           R VYPKVSR+IPI
Sbjct: 61  RRVYPKVSRSIPI 73


>gb|ABK28123.1| unknown [Arabidopsis thaliana]
          Length = 74

 Score =  122 bits (306), Expect = 3e-26
 Identities = 54/73 (73%), Positives = 59/73 (80%)
 Frame = +1

Query: 127 MSFPSCIQCGTRSNPCRCKVVGPTLGXXXXXXXXXXEWPIGAVVYIFRHMKGRRIMGHPA 306
           M FP+C+QCGTR NPCRCKVVGPTLG          EWP+GAVVYIF+H KGRRIMGHPA
Sbjct: 1   MVFPACVQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPA 60

Query: 307 RVVYPKVSRAIPI 345
           R VYPKVSR+IPI
Sbjct: 61  RKVYPKVSRSIPI 73


>gb|ABF59464.1| unknown protein [Arabidopsis thaliana]
          Length = 73

 Score =  122 bits (306), Expect = 3e-26
 Identities = 54/73 (73%), Positives = 59/73 (80%)
 Frame = +1

Query: 127 MSFPSCIQCGTRSNPCRCKVVGPTLGXXXXXXXXXXEWPIGAVVYIFRHMKGRRIMGHPA 306
           M FP+C+QCGTR NPCRCKVVGPTLG          EWP+GAVVYIF+H KGRRIMGHPA
Sbjct: 1   MVFPACVQCGTRQNPCRCKVVGPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPA 60

Query: 307 RVVYPKVSRAIPI 345
           R VYPKVSR+IPI
Sbjct: 61  RKVYPKVSRSIPI 73


>ref|XP_003569447.1| PREDICTED: uncharacterized protein LOC100828693 [Brachypodium
           distachyon]
          Length = 74

 Score =  120 bits (300), Expect = 2e-25
 Identities = 52/70 (74%), Positives = 58/70 (82%)
 Frame = +1

Query: 136 PSCIQCGTRSNPCRCKVVGPTLGXXXXXXXXXXEWPIGAVVYIFRHMKGRRIMGHPARVV 315
           P+C+QCGTRSNPCRCKVVGPTLG          EWP+GA VY+FRH KGRRIMGHPARVV
Sbjct: 5   PACVQCGTRSNPCRCKVVGPTLGFVAFLVTGVVEWPLGAAVYLFRHRKGRRIMGHPARVV 64

Query: 316 YPKVSRAIPI 345
           YP+V+RAIPI
Sbjct: 65  YPRVTRAIPI 74


>gb|AAG40345.1|AF324993_1 AT5g17460 [Arabidopsis thaliana]
          Length = 73

 Score =  119 bits (298), Expect = 3e-25
 Identities = 53/73 (72%), Positives = 58/73 (79%)
 Frame = +1

Query: 127 MSFPSCIQCGTRSNPCRCKVVGPTLGXXXXXXXXXXEWPIGAVVYIFRHMKGRRIMGHPA 306
           M FP+C+QCGTR NPCRCKVV PTLG          EWP+GAVVYIF+H KGRRIMGHPA
Sbjct: 1   MVFPACVQCGTRQNPCRCKVVEPTLGFVAFLITGIIEWPVGAVVYIFKHAKGRRIMGHPA 60

Query: 307 RVVYPKVSRAIPI 345
           R VYPKVSR+IPI
Sbjct: 61  RKVYPKVSRSIPI 73


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