BLASTX nr result

ID: Coptis25_contig00024609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024609
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299458.1| predicted protein [Populus trichocarpa] gi|2...    77   3e-12
ref|XP_002527080.1| ubiquitin-conjugating enzyme E2, putative [R...    73   3e-11
emb|CBI16509.3| unnamed protein product [Vitis vinifera]               70   3e-10
ref|XP_002283548.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...    70   3e-10
ref|NP_001236271.1| uncharacterized protein LOC100527196 [Glycin...    69   4e-10

>ref|XP_002299458.1| predicted protein [Populus trichocarpa] gi|222846716|gb|EEE84263.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score = 76.6 bits (187), Expect = 3e-12
 Identities = 33/47 (70%), Positives = 40/47 (85%)
 Frame = -1

Query: 161 TSTALAIRSIITNPEPYNPLTPGVAHLYMENRAKDDEIAAEWTLRFS 21
           T   LAIRSI T+P+PYNPL PG+AHLY+ +RAK DE+AAEWTLRF+
Sbjct: 122 TKVLLAIRSIFTHPDPYNPLVPGIAHLYLADRAKHDELAAEWTLRFA 168


>ref|XP_002527080.1| ubiquitin-conjugating enzyme E2, putative [Ricinus communis]
           gi|223533585|gb|EEF35324.1| ubiquitin-conjugating enzyme
           E2, putative [Ricinus communis]
          Length = 181

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 29/47 (61%), Positives = 40/47 (85%)
 Frame = -1

Query: 161 TSTALAIRSIITNPEPYNPLTPGVAHLYMENRAKDDEIAAEWTLRFS 21
           T   +AIRS+ T+P+PYNPL PG+AHLY+ +RAK DE+AA+WT+RF+
Sbjct: 134 TKILIAIRSVFTHPDPYNPLVPGIAHLYLADRAKHDELAAQWTMRFA 180


>emb|CBI16509.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 29/47 (61%), Positives = 38/47 (80%)
 Frame = -1

Query: 161 TSTALAIRSIITNPEPYNPLTPGVAHLYMENRAKDDEIAAEWTLRFS 21
           ++  LAIRSI T P+PYN L PG+AHLY+ +R+K DE+A EWTLRF+
Sbjct: 481 SNVLLAIRSIFTKPDPYNALVPGIAHLYLADRSKHDEVATEWTLRFA 527


>ref|XP_002283548.1| PREDICTED: glucan endo-1,3-beta-glucosidase 4-like [Vitis vinifera]
          Length = 676

 Score = 69.7 bits (169), Expect = 3e-10
 Identities = 29/47 (61%), Positives = 38/47 (80%)
 Frame = -1

Query: 161 TSTALAIRSIITNPEPYNPLTPGVAHLYMENRAKDDEIAAEWTLRFS 21
           ++  LAIRSI T P+PYN L PG+AHLY+ +R+K DE+A EWTLRF+
Sbjct: 629 SNVLLAIRSIFTKPDPYNALVPGIAHLYLADRSKHDEVATEWTLRFA 675


>ref|NP_001236271.1| uncharacterized protein LOC100527196 [Glycine max]
           gi|255631762|gb|ACU16248.1| unknown [Glycine max]
          Length = 138

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 29/47 (61%), Positives = 38/47 (80%)
 Frame = -1

Query: 161 TSTALAIRSIITNPEPYNPLTPGVAHLYMENRAKDDEIAAEWTLRFS 21
           T   L +RSI+TNP+PYN + PG+AHLY  +RAK D+IAAEWT+RF+
Sbjct: 91  TKVLLEVRSIMTNPDPYNAVVPGIAHLYSGDRAKHDDIAAEWTVRFA 137


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