BLASTX nr result

ID: Coptis25_contig00024605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024605
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278627.2| PREDICTED: uncharacterized protein LOC100263...    73   3e-11
ref|XP_003552694.1| PREDICTED: uncharacterized protein LOC100788...    57   2e-06
ref|XP_002882326.1| predicted protein [Arabidopsis lyrata subsp....    56   3e-06
ref|XP_003621884.1| hypothetical protein MTR_7g024560 [Medicago ...    56   3e-06
ref|NP_187052.4| uncharacterized protein [Arabidopsis thaliana] ...    55   6e-06

>ref|XP_002278627.2| PREDICTED: uncharacterized protein LOC100263308 [Vitis vinifera]
           gi|296086229|emb|CBI31670.3| unnamed protein product
           [Vitis vinifera]
          Length = 309

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 31/43 (72%), Positives = 38/43 (88%)
 Frame = +1

Query: 280 KDALMLSVDRKGFDVIGKVPSLTTKDEFGEYEWREYRFTFKEE 408
           KDA +LS+DRKGFDV+GKVPS   KD FGEY+W+E+RFTF+EE
Sbjct: 237 KDAYVLSIDRKGFDVLGKVPSPPMKDGFGEYQWKEFRFTFREE 279


>ref|XP_003552694.1| PREDICTED: uncharacterized protein LOC100788957 [Glycine max]
          Length = 308

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = +1

Query: 280 KDALMLSVDRKGFDVIGKVPSLTTKDEFGEYEWREYRFTFKEE 408
           KDA + S+DRKGFDV+ KV S   KD    Y+W+E+RF FKEE
Sbjct: 237 KDAYITSIDRKGFDVLAKVSSPVLKDGIDGYQWKEFRFMFKEE 279


>ref|XP_002882326.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328166|gb|EFH58585.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 236

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 29/52 (55%), Positives = 41/52 (78%), Gaps = 3/52 (5%)
 Frame = +1

Query: 262 LFYLFV--KDALMLSVDRKGFDVIGKVPSLTTKDEFG-EYEWREYRFTFKEE 408
           L+YL +  +DA M+SVD+KGF ++GKVPS   ++E G EY+WRE+RF F+EE
Sbjct: 160 LYYLDINARDAYMVSVDKKGFHLLGKVPS---EEEAGDEYQWREFRFEFEEE 208


>ref|XP_003621884.1| hypothetical protein MTR_7g024560 [Medicago truncatula]
           gi|355496899|gb|AES78102.1| hypothetical protein
           MTR_7g024560 [Medicago truncatula]
          Length = 307

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 24/43 (55%), Positives = 32/43 (74%)
 Frame = +1

Query: 280 KDALMLSVDRKGFDVIGKVPSLTTKDEFGEYEWREYRFTFKEE 408
           KDA + SVDRKGFDV+ KV    +KD  G+Y+W+E RF F++E
Sbjct: 236 KDAYVTSVDRKGFDVLAKVTGPVSKDGVGQYQWKELRFMFEQE 278


>ref|NP_187052.4| uncharacterized protein [Arabidopsis thaliana]
           gi|332640505|gb|AEE74026.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 304

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/51 (52%), Positives = 39/51 (76%), Gaps = 2/51 (3%)
 Frame = +1

Query: 262 LFYLFV--KDALMLSVDRKGFDVIGKVPSLTTKDEFGEYEWREYRFTFKEE 408
           L++L +  +DA M+SVDRKGF ++GKVPS   ++   EY+WRE+RF F+EE
Sbjct: 228 LYFLDINARDAYMVSVDRKGFHLLGKVPS--EQEAGDEYQWREFRFEFEEE 276


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