BLASTX nr result

ID: Coptis25_contig00024595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00024595
         (919 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523034.1| conserved hypothetical protein [Ricinus comm...   102   1e-19
ref|NP_191084.1| uncharacterized protein [Arabidopsis thaliana] ...    98   3e-18
ref|XP_003568285.1| PREDICTED: uncharacterized protein LOC100835...    97   4e-18
ref|XP_002265038.1| PREDICTED: uncharacterized protein LOC100245...    97   4e-18
ref|XP_002533662.1| conserved hypothetical protein [Ricinus comm...    96   1e-17

>ref|XP_002523034.1| conserved hypothetical protein [Ricinus communis]
           gi|223537717|gb|EEF39338.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 99

 Score =  102 bits (255), Expect = 1e-19
 Identities = 56/96 (58%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
 Frame = -3

Query: 812 MGDSSSASYIRVVQHLIEKCLLFNMTQEECMEALSKHANITPVITSTVWXXXXXXXXXXX 633
           MGDSS ASYI +VQHLIEKCL+F+MT+EECMEALSKHANITPVITSTVW           
Sbjct: 1   MGDSS-ASYIHMVQHLIEKCLIFHMTKEECMEALSKHANITPVITSTVWNELEKENKEFF 59

Query: 632 EGYYWRKREEHKV-EMEPKDMIQRMLTAESSTEDSQ 528
           E Y   KR++ ++ E E   MIQ+M++  S   D Q
Sbjct: 60  EAYIESKRKDDRMSEEETSQMIQKMISESSKDSDDQ 95


>ref|NP_191084.1| uncharacterized protein [Arabidopsis thaliana]
           gi|297820286|ref|XP_002878026.1| hypothetical protein
           ARALYDRAFT_485945 [Arabidopsis lyrata subsp. lyrata]
           gi|7019657|emb|CAB75758.1| putative protein [Arabidopsis
           thaliana] gi|19310583|gb|AAL85022.1| unknown protein
           [Arabidopsis thaliana] gi|24030411|gb|AAN41364.1|
           unknown protein [Arabidopsis thaliana]
           gi|297323864|gb|EFH54285.1| hypothetical protein
           ARALYDRAFT_485945 [Arabidopsis lyrata subsp. lyrata]
           gi|332645835|gb|AEE79356.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 95

 Score = 97.8 bits (242), Expect = 3e-18
 Identities = 50/94 (53%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
 Frame = -3

Query: 812 MGDSSSASYIRVVQHLIEKCLLFNMTQEECMEALSKHANITPVITSTVWXXXXXXXXXXX 633
           M DSSSASYI +VQH+IEKCL+F+M++EEC+EALSKHANITPVITSTVW           
Sbjct: 1   MADSSSASYIHMVQHMIEKCLIFHMSKEECVEALSKHANITPVITSTVWKELEKENKEFF 60

Query: 632 EGYYWRK-REEHKVEMEPKDMIQRMLTAESSTED 534
           + Y  R+ ++E   E E   MIQ++++  S   D
Sbjct: 61  KAYEERQSKQEQMSEEETNQMIQKIISDSSKESD 94


>ref|XP_003568285.1| PREDICTED: uncharacterized protein LOC100835403 [Brachypodium
           distachyon]
          Length = 99

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 52/98 (53%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
 Frame = -3

Query: 812 MGDSSSASYIRVVQHLIEKCLLFNMTQEECMEALSKHANITPVITSTVWXXXXXXXXXXX 633
           MGDSSSASYIR+V HLIEKC+ FN+ +EEC+EAL KHA+I PV+TSTVW           
Sbjct: 1   MGDSSSASYIRMVHHLIEKCICFNLNKEECIEALEKHASINPVVTSTVWKELEKENREFF 60

Query: 632 EGYYWRKREEHKVEMEPKDMIQRMLT--AESSTEDSQD 525
           E Y  + R E K+E E    +Q+ML+  A S T D  D
Sbjct: 61  ETYQ-KDRAERKIEAETMQRVQKMLSDAAASRTSDDDD 97


>ref|XP_002265038.1| PREDICTED: uncharacterized protein LOC100245098 [Vitis vinifera]
           gi|302143639|emb|CBI22392.3| unnamed protein product
           [Vitis vinifera]
          Length = 99

 Score = 97.4 bits (241), Expect = 4e-18
 Identities = 54/99 (54%), Positives = 67/99 (67%), Gaps = 5/99 (5%)
 Frame = -3

Query: 812 MGDSS--SASYIRVVQHLIEKCLLFNMTQEECMEALSKHANITPVITSTVWXXXXXXXXX 639
           MGDSS  SASYI +VQHLIEKCL+F+MT+E+CMEALSKHA+I PVITSTVW         
Sbjct: 1   MGDSSASSASYIHMVQHLIEKCLIFHMTKEQCMEALSKHADIQPVITSTVWNELEKENKE 60

Query: 638 XXEGYYWRKR---EEHKVEMEPKDMIQRMLTAESSTEDS 531
             E YY + R   ++   E E  +MIQ+M+T  S   D+
Sbjct: 61  FFEVYYTQTRTRDDDQMSETETTEMIQKMITKSSKHSDT 99


>ref|XP_002533662.1| conserved hypothetical protein [Ricinus communis]
           gi|223526444|gb|EEF28721.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 98

 Score = 95.9 bits (237), Expect = 1e-17
 Identities = 54/96 (56%), Positives = 65/96 (67%), Gaps = 1/96 (1%)
 Frame = -3

Query: 812 MGDSSSASYIRVVQHLIEKCLLFNMTQEECMEALSKHANITPVITSTVWXXXXXXXXXXX 633
           MGDSS ASYIR+VQHLIE+CL+F MT+EECMEALSKHANITPVITSTVW           
Sbjct: 1   MGDSS-ASYIRMVQHLIERCLIFRMTKEECMEALSKHANITPVITSTVWNELEKENKEFF 59

Query: 632 EGYYWRKREEHKV-EMEPKDMIQRMLTAESSTEDSQ 528
           E Y   K ++ ++ + E   MIQ+M+   S   D Q
Sbjct: 60  EVYAQSKSKDDRMSDEETTQMIQKMVLEPSRDPDDQ 95


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